RNA–Protein interactions for RNA: ENST00000522250.5

FAM49B-220, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 5 BASIC

Gene FAM49B, Length 1,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-220ENST00000522250 NISCHQ9Y2I1 1504 aa29.2■■■□□ 2.26
FAM49B-220ENST00000522250 CCDC180Q9P1Z9 1646 aa26.21■■□□□ 1.79
FAM49B-220ENST00000522250 ABCC9O60706 1549 aa26.12■■□□□ 1.77
FAM49B-220ENST00000522250 RB1CC1Q8TDY2 1594 aa24.89■■□□□ 1.57
FAM49B-220ENST00000522250 NACADO15069 1562 aa24.73■■□□□ 1.55
FAM49B-220ENST00000522250 DCAF8L2P0C7V8 631 aa24.53■■□□□ 1.52
FAM49B-220ENST00000522250 DNAJC5BQ9UF47 199 aa24.46■■□□□ 1.51
FAM49B-220ENST00000522250 MYO15BQ96JP2 1530 aa24.41■■□□□ 1.5
FAM49B-220ENST00000522250 UNC13AQ9UPW8 1703 aa24.4■■□□□ 1.5
FAM49B-220ENST00000522250 PABPN1Q86U42 306 aaKnown RBP eCLIP24.3■■□□□ 1.48
FAM49B-220ENST00000522250 ZCCHC6Q5VYS8 1495 aaKnown RBP24.23■■□□□ 1.47
FAM49B-220ENST00000522250 BICRAQ9NZM4 1560 aa24.21■■□□□ 1.47
FAM49B-220ENST00000522250 DCAF1Q9Y4B6 1507 aa24.12■■□□□ 1.45
FAM49B-220ENST00000522250 SCRIBQ14160 1630 aa23.88■■□□□ 1.41
FAM49B-220ENST00000522250 SHROOM4Q9ULL8 1493 aa23.84■■□□□ 1.41
FAM49B-220ENST00000522250 CC2D2AQ9P2K1 1620 aa23.62■■□□□ 1.37
FAM49B-220ENST00000522250 EIF4G1Q04637 1599 aaKnown RBP23.58■■□□□ 1.37
FAM49B-220ENST00000522250 CECR2Q9BXF3 1484 aa23.51■■□□□ 1.35
FAM49B-220ENST00000522250 NCAPD3P42695 1498 aa22.82■■□□□ 1.24
FAM49B-220ENST00000522250 SMARCA4P51532 1647 aa22.79■■□□□ 1.24
FAM49B-220ENST00000522250 ATAD2BQ9ULI0 1458 aa22.77■■□□□ 1.24
FAM49B-220ENST00000522250 SMARCA2P51531 1590 aa22.7■■□□□ 1.22
FAM49B-220ENST00000522250 HMGXB3Q12766 1538 aa22.68■■□□□ 1.22
FAM49B-220ENST00000522250 BAZ1AQ9NRL2 1556 aaPredicted RBP22.65■■□□□ 1.22
FAM49B-220ENST00000522250 PEG3Q9GZU2 1588 aa22.56■■□□□ 1.2
FAM49B-220ENST00000522250 BAZ1BQ9UIG0 1483 aaKnown RBP22.54■■□□□ 1.2
FAM49B-220ENST00000522250 ERCC6Q03468 1493 aa22.52■■□□□ 1.2
FAM49B-220ENST00000522250 MROH2BQ7Z745 1585 aa22.52■■□□□ 1.2
FAM49B-220ENST00000522250 CUX2O14529 1486 aa22.48■■□□□ 1.19
FAM49B-220ENST00000522250 NESP48681 1621 aa22.48■■□□□ 1.19
FAM49B-220ENST00000522250 DNAJC5Q9H3Z4 198 aa22.39■■□□□ 1.17
FAM49B-220ENST00000522250 LAMC3Q9Y6N6 1575 aa22.31■■□□□ 1.16
FAM49B-220ENST00000522250 THOC2Q8NI27 1593 aaKnown RBP22.27■■□□□ 1.16
FAM49B-220ENST00000522250 WIZO95785 1651 aa22.26■■□□□ 1.15
FAM49B-220ENST00000522250 KIF21AQ7Z4S6 1674 aa22.22■■□□□ 1.15
FAM49B-220ENST00000522250 PDS5BQ9NTI5 1447 aa22.14■■□□□ 1.14
FAM49B-220ENST00000522250 CADPSQ9ULU8 1353 aa22.11■■□□□ 1.13
FAM49B-220ENST00000522250 RSF1Q96T23 1441 aaPredicted RBP22.04■■□□□ 1.12
FAM49B-220ENST00000522250 MRC2Q9UBG0 1479 aa21.98■■□□□ 1.11
FAM49B-220ENST00000522250 TOP2AP11388 1531 aaKnown RBP21.97■■□□□ 1.11
FAM49B-220ENST00000522250 WDR62O43379 1518 aa21.95■■□□□ 1.1
FAM49B-220ENST00000522250 CFTRP13569 1480 aa21.9■■□□□ 1.1
FAM49B-220ENST00000522250 CEP164Q9UPV0 1460 aa21.9■■□□□ 1.1
FAM49B-220ENST00000522250 FANCD2Q9BXW9 1451 aa21.88■■□□□ 1.09
FAM49B-220ENST00000522250 PRDM2Q13029 1718 aa21.74■■□□□ 1.07
FAM49B-220ENST00000522250 URB2Q14146 1524 aaKnown RBP21.73■■□□□ 1.07
FAM49B-220ENST00000522250 CCDC88BA6NC98 1476 aa21.7■■□□□ 1.06
FAM49B-220ENST00000522250 TOPBP1Q92547 1522 aa21.49■■□□□ 1.03
FAM49B-220ENST00000522250 IFT140Q96RY7 1462 aa21.45■■□□□ 1.02
FAM49B-220ENST00000522250 ZNF608Q9ULD9 1512 aaPredicted RBP21.44■■□□□ 1.02
FAM49B-220ENST00000522250 DNMBPQ6XZF7 1577 aa21.42■■□□□ 1.02
FAM49B-220ENST00000522250 OSCARQ8IYS5 282 aa21.41■■□□□ 1.02
FAM49B-220ENST00000522250 TRIM41Q8WV44 630 aa21.41■■□□□ 1.02
FAM49B-220ENST00000522250 ABCC8Q09428 1581 aa21.4■■□□□ 1.02
FAM49B-220ENST00000522250 EIF4G3O43432 1585 aaKnown RBP21.35■■□□□ 1.01
FAM49B-220ENST00000522250 TARBP1Q13395 1621 aaKnown RBP21.32■■□□□ 1
FAM49B-220ENST00000522250 POLA1P09884 1462 aaPredicted RBP21.27■■□□□ 1
FAM49B-220ENST00000522250 AQRO60306 1485 aaKnown RBP eCLIP21.24■□□□□ 0.999e-8■■■■■ 31.5
FAM49B-220ENST00000522250 RIMBP3CA6NJZ7 1639 aa21.21■□□□□ 0.99
FAM49B-220ENST00000522250 RIMBP3BA6NNM3 1639 aa21.21■□□□□ 0.99
FAM49B-220ENST00000522250 RIMBP3Q9UFD9 1639 aa21.21■□□□□ 0.99
FAM49B-220ENST00000522250 CHD1O14646 1710 aa21.19■□□□□ 0.98
FAM49B-220ENST00000522250 RAD54L2Q9Y4B4 1467 aa21.19■□□□□ 0.98
FAM49B-220ENST00000522250 CUX1P39880 1505 aa21.16■□□□□ 0.98
FAM49B-220ENST00000522250 FGD5Q6ZNL6 1462 aa21.15■□□□□ 0.98
FAM49B-220ENST00000522250 SOGA1O94964 1423 aa21.15■□□□□ 0.98
FAM49B-220ENST00000522250 ARHGEF11O15085 1522 aa21.14■□□□□ 0.97
FAM49B-220ENST00000522250 TDRD9Q8NDG6 1382 aaKnown RBP21.1■□□□□ 0.97
FAM49B-220ENST00000522250 WDR97A6NE52 1622 aa21.08■□□□□ 0.96
FAM49B-220ENST00000522250 SUPT5HO00267 1087 aaKnown RBP21.05■□□□□ 0.96
FAM49B-220ENST00000522250 SNAPC4Q5SXM2 1469 aa21.04■□□□□ 0.96
FAM49B-220ENST00000522250 FBLN2P98095 1184 aa21.03■□□□□ 0.96
FAM49B-220ENST00000522250 GRIN2BQ13224 1484 aa20.96■□□□□ 0.95
FAM49B-220ENST00000522250 MAGI1Q96QZ7 1491 aaPredicted RBP20.96■□□□□ 0.95
FAM49B-220ENST00000522250 PBRM1Q86U86 1689 aa20.95■□□□□ 0.94
FAM49B-220ENST00000522250 ARAP1Q96P48 1450 aa20.94■□□□□ 0.94
FAM49B-220ENST00000522250 CLASP1Q7Z460 1538 aa20.94■□□□□ 0.94
FAM49B-220ENST00000522250 CYB5RLQ6IPT4 315 aa20.92■□□□□ 0.94
FAM49B-220ENST00000522250 ABCA5Q8WWZ7 1642 aa20.91■□□□□ 0.94
FAM49B-220ENST00000522250 ABCA10Q8WWZ4 1543 aa20.91■□□□□ 0.94
FAM49B-220ENST00000522250 GAPVD1Q14C86 1478 aa20.9■□□□□ 0.94
FAM49B-220ENST00000522250 SYNJ2O15056 1496 aa20.9■□□□□ 0.94
FAM49B-220ENST00000522250 SYNJ1O43426 1573 aa20.89■□□□□ 0.93
FAM49B-220ENST00000522250 CHMP7Q8WUX9 453 aaPredicted RBP20.88■□□□□ 0.93
FAM49B-220ENST00000522250 BIVM-ERCC5R4GMW8 1640 aa20.84■□□□□ 0.93
FAM49B-220ENST00000522250 TOP2BQ02880 1626 aa20.82■□□□□ 0.92
FAM49B-220ENST00000522250 WRNQ14191 1432 aaPredicted RBP eCLIP20.79■□□□□ 0.92
FAM49B-220ENST00000522250 AEBP2Q6ZN18 517 aaPredicted RBP20.77■□□□□ 0.92
FAM49B-220ENST00000522250 ADAMTS12P58397 1594 aa20.74■□□□□ 0.91
FAM49B-220ENST00000522250 GRIN2AQ12879 1464 aa20.71■□□□□ 0.91
FAM49B-220ENST00000522250 CEP170Q5SW79 1584 aa20.67■□□□□ 0.9
FAM49B-220ENST00000522250 TRHP20396 242 aaPredicted RBP20.65■□□□□ 0.9
FAM49B-220ENST00000522250 NUP160Q12769 1436 aa20.65■□□□□ 0.9
FAM49B-220ENST00000522250 ERICH3Q5RHP9 1530 aa20.64■□□□□ 0.89
FAM49B-220ENST00000522250 ERCC6L2Q5T890 1561 aa20.63■□□□□ 0.89
FAM49B-220ENST00000522250 FHAD1B1AJZ9 1412 aa20.63■□□□□ 0.89
FAM49B-220ENST00000522250 SHROOM2Q13796 1616 aa20.58■□□□□ 0.89
FAM49B-220ENST00000522250 RUSC2Q8N2Y8 1516 aa20.45■□□□□ 0.86
FAM49B-220ENST00000522250 CHIC1Q5VXU3 224 aa20.45■□□□□ 0.86
FAM49B-220ENST00000522250 PRG4Q92954 1404 aaPredicted RBP20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms