RNA–Protein interactions for RNA: ENST00000521384.5

CDH12-206, Transcript of cadherin 12, humanhuman

TSL 2

Gene CDH12, Length 2,164 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-206ENST00000521384 CHIC1Q5VXU3 224 aa14.32□□□□□ -0.12
CDH12-206ENST00000521384 AEBP2Q6ZN18 517 aaPredicted RBP14.12□□□□□ -0.15
CDH12-206ENST00000521384 NISCHQ9Y2I1 1504 aa13.69□□□□□ -0.22
CDH12-206ENST00000521384 PHF23Q9BUL5 403 aaPredicted RBP12.8□□□□□ -0.36
CDH12-206ENST00000521384 CCDC180Q9P1Z9 1646 aa12.05□□□□□ -0.48
CDH12-206ENST00000521384 SLC24A1O60721 1099 aa11.94□□□□□ -0.5
CDH12-206ENST00000521384 PLPPR3Q6T4P5 718 aa11.89□□□□□ -0.51
CDH12-206ENST00000521384 ABCC9O60706 1549 aa11.75□□□□□ -0.53
CDH12-206ENST00000521384 SENP3Q9H4L4 574 aaPredicted RBP11.66□□□□□ -0.54
CDH12-206ENST00000521384 DCAF8L2P0C7V8 631 aa11.5□□□□□ -0.57
CDH12-206ENST00000521384 ZCCHC6Q5VYS8 1495 aaKnown RBP11.44□□□□□ -0.58
CDH12-206ENST00000521384 EHMT2Q96KQ7 1210 aa11.37□□□□□ -0.59
CDH12-206ENST00000521384 ADRA2BP18089 450 aa11.32□□□□□ -0.6
CDH12-206ENST00000521384 NACADO15069 1562 aa11.31□□□□□ -0.6
CDH12-206ENST00000521384 RB1CC1Q8TDY2 1594 aa11.3□□□□□ -0.6
CDH12-206ENST00000521384 DCAF1Q9Y4B6 1507 aa11.28□□□□□ -0.6
CDH12-206ENST00000521384 KCNA4P22459 653 aa11.27□□□□□ -0.6
CDH12-206ENST00000521384 MYO15BQ96JP2 1530 aa11.26□□□□□ -0.61
CDH12-206ENST00000521384 PPP6R1Q9UPN7 881 aa11.1□□□□□ -0.63
CDH12-206ENST00000521384 SCRIBQ14160 1630 aa11.09□□□□□ -0.63
CDH12-206ENST00000521384 PABPN1Q86U42 306 aaKnown RBP eCLIP11.03□□□□□ -0.64
CDH12-206ENST00000521384 UNC13AQ9UPW8 1703 aa11.03□□□□□ -0.64
CDH12-206ENST00000521384 SHROOM4Q9ULL8 1493 aa11.02□□□□□ -0.65
CDH12-206ENST00000521384 BICRAQ9NZM4 1560 aa10.96□□□□□ -0.66
CDH12-206ENST00000521384 CSRNP3Q8WYN3 585 aa10.9□□□□□ -0.66
CDH12-206ENST00000521384 FOXD1Q16676 465 aa10.87□□□□□ -0.67
CDH12-206ENST00000521384 DAXXQ9UER7 740 aaPredicted RBP10.85□□□□□ -0.67
CDH12-206ENST00000521384 SLC4A1APQ9BWU0 796 aaKnown RBP10.75□□□□□ -0.69
CDH12-206ENST00000521384 RTN4Q9NQC3 1192 aaKnown RBP10.73□□□□□ -0.69
CDH12-206ENST00000521384 HRCP23327 699 aa10.72□□□□□ -0.69
CDH12-206ENST00000521384 CECR2Q9BXF3 1484 aa10.68□□□□□ -0.7
CDH12-206ENST00000521384 EIF4G1Q04637 1599 aaKnown RBP10.67□□□□□ -0.7
CDH12-206ENST00000521384 NCBP3Q53F19 620 aaKnown RBP10.65□□□□□ -0.7
CDH12-206ENST00000521384 DNAJC5BQ9UF47 199 aa10.65□□□□□ -0.71
CDH12-206ENST00000521384 PPP4R3CPQ6ZMV5 832 aa10.62□□□□□ -0.71
CDH12-206ENST00000521384 CC2D2AQ9P2K1 1620 aa10.59□□□□□ -0.71
CDH12-206ENST00000521384 BAZ1AQ9NRL2 1556 aaPredicted RBP10.59□□□□□ -0.71
CDH12-206ENST00000521384 SMARCA4P51532 1647 aa10.59□□□□□ -0.71
CDH12-206ENST00000521384 MROH2BQ7Z745 1585 aa10.58□□□□□ -0.72
CDH12-206ENST00000521384 SUPT5HO00267 1087 aaKnown RBP10.57□□□□□ -0.72
CDH12-206ENST00000521384 POTEDQ86YR6 584 aa10.53□□□□□ -0.72
CDH12-206ENST00000521384 RSF1Q96T23 1441 aaPredicted RBP10.51□□□□□ -0.73
CDH12-206ENST00000521384 ATAD2BQ9ULI0 1458 aa10.5□□□□□ -0.73
CDH12-206ENST00000521384 SMARCA2P51531 1590 aa10.48□□□□□ -0.73
CDH12-206ENST00000521384 WIZO95785 1651 aa10.46□□□□□ -0.73
CDH12-206ENST00000521384 PCGF6Q9BYE7 350 aa10.46□□□□□ -0.73
CDH12-206ENST00000521384 ZBTB22O15209 634 aa10.46□□□□□ -0.74
CDH12-206ENST00000521384 NCAPD3P42695 1498 aa10.45□□□□□ -0.74
CDH12-206ENST00000521384 PEG3Q9GZU2 1588 aa10.44□□□□□ -0.74
CDH12-206ENST00000521384 NPM3O75607 178 aaKnown RBP10.44□□□□□ -0.74
CDH12-206ENST00000521384 APLP2Q06481 763 aa10.44□□□□□ -0.74
CDH12-206ENST00000521384 BAZ1BQ9UIG0 1483 aaKnown RBP10.44□□□□□ -0.74
CDH12-206ENST00000521384 PRKCSHP14314 528 aaPredicted RBP10.42□□□□□ -0.74
CDH12-206ENST00000521384 PPARGC1BQ86YN6 1023 aaKnown RBP10.42□□□□□ -0.74
CDH12-206ENST00000521384 TTBK1Q5TCY1 1321 aaPredicted RBP10.41□□□□□ -0.74
CDH12-206ENST00000521384 HMGXB3Q12766 1538 aa10.41□□□□□ -0.74
CDH12-206ENST00000521384 AMER1Q5JTC6 1135 aaPredicted RBP10.38□□□□□ -0.75
CDH12-206ENST00000521384 PIAS4Q8N2W9 510 aaPredicted RBP10.38□□□□□ -0.75
CDH12-206ENST00000521384 PELP1Q8IZL8 1130 aaKnown RBP10.35□□□□□ -0.75
CDH12-206ENST00000521384 TOP2AP11388 1531 aaKnown RBP10.35□□□□□ -0.75
CDH12-206ENST00000521384 MYT1Q01538 1121 aa10.33□□□□□ -0.76
CDH12-206ENST00000521384 CCDC88BA6NC98 1476 aa10.25□□□□□ -0.77
CDH12-206ENST00000521384 NESP48681 1621 aa10.21□□□□□ -0.78
CDH12-206ENST00000521384 ARXQ96QS3 562 aa10.2□□□□□ -0.78
CDH12-206ENST00000521384 TRIM26Q12899 539 aaPredicted RBP10.19□□□□□ -0.78
CDH12-206ENST00000521384 ERICH6Q7L0X2 663 aa10.19□□□□□ -0.78
CDH12-206ENST00000521384 CADPSQ9ULU8 1353 aa10.18□□□□□ -0.78
CDH12-206ENST00000521384 TIMELESSQ9UNS1 1208 aa10.16□□□□□ -0.78
CDH12-206ENST00000521384 ZEB1P37275 1124 aaPredicted RBP10.15□□□□□ -0.79
CDH12-206ENST00000521384 LAMC3Q9Y6N6 1575 aa10.14□□□□□ -0.79
CDH12-206ENST00000521384 CFTRP13569 1480 aa10.14□□□□□ -0.79
CDH12-206ENST00000521384 LOC105371045A0A1W2PR82 267 aa10.14□□□□□ -0.79
CDH12-206ENST00000521384 ERCC6Q03468 1493 aa10.11□□□□□ -0.79
CDH12-206ENST00000521384 CNKSR2Q8WXI2 1034 aa10.11□□□□□ -0.79
CDH12-206ENST00000521384 PDS5BQ9NTI5 1447 aa10.1□□□□□ -0.79
CDH12-206ENST00000521384 SCAF1Q9H7N4 1312 aaKnown RBP10.08□□□□□ -0.8
CDH12-206ENST00000521384 FANCD2Q9BXW9 1451 aa10.07□□□□□ -0.8
CDH12-206ENST00000521384 KIF21AQ7Z4S6 1674 aa10.05□□□□□ -0.8
CDH12-206ENST00000521384 CEP164Q9UPV0 1460 aa10.04□□□□□ -0.8
CDH12-206ENST00000521384 FOXD4L1Q9NU39 408 aa10.04□□□□□ -0.8
CDH12-206ENST00000521384 PRDM2Q13029 1718 aa10.03□□□□□ -0.8
CDH12-206ENST00000521384 MSH5O43196 834 aa9.99□□□□□ -0.81
CDH12-206ENST00000521384 MRC2Q9UBG0 1479 aa9.99□□□□□ -0.81
CDH12-206ENST00000521384 TULP1O00294 542 aaPredicted RBP9.97□□□□□ -0.81
CDH12-206ENST00000521384 THOC2Q8NI27 1593 aaKnown RBP9.97□□□□□ -0.81
CDH12-206ENST00000521384 URB2Q14146 1524 aaKnown RBP9.96□□□□□ -0.82
CDH12-206ENST00000521384 TAOK2Q9UL54 1235 aa9.95□□□□□ -0.82
CDH12-206ENST00000521384 ABCC8Q09428 1581 aa9.94□□□□□ -0.82
CDH12-206ENST00000521384 WDR62O43379 1518 aa9.93□□□□□ -0.82
CDH12-206ENST00000521384 TOPBP1Q92547 1522 aa9.92□□□□□ -0.82
CDH12-206ENST00000521384 WRNQ14191 1432 aaPredicted RBP eCLIP9.91□□□□□ -0.82
CDH12-206ENST00000521384 CUX1P39880 1505 aa9.91□□□□□ -0.82
CDH12-206ENST00000521384 DNMBPQ6XZF7 1577 aa9.91□□□□□ -0.82
CDH12-206ENST00000521384 CUX2O14529 1486 aa9.89□□□□□ -0.83
CDH12-206ENST00000521384 MAPK8IP2Q13387 824 aaPredicted RBP9.88□□□□□ -0.83
CDH12-206ENST00000521384 ACIN1Q9UKV3 1341 aaKnown RBP9.88□□□□□ -0.83
CDH12-206ENST00000521384 SYNJ1O43426 1573 aa9.87□□□□□ -0.83
CDH12-206ENST00000521384 FGD5Q6ZNL6 1462 aa9.86□□□□□ -0.83
CDH12-206ENST00000521384 POLA1P09884 1462 aaPredicted RBP9.86□□□□□ -0.83
CDH12-206ENST00000521384 KLHL34Q8N239 644 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms