RNA–Protein interactions for RNA: ENST00000521354.5

TPD52-218, Transcript of tumor protein D52, humanhuman

TSL 2

Gene TPD52, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPD52-218ENST00000521354 NISCHQ9Y2I1 1504 aa46.73■■■■■ 5.07
TPD52-218ENST00000521354 CCDC180Q9P1Z9 1646 aa41.74■■■■■ 4.27
TPD52-218ENST00000521354 ABCC9O60706 1549 aa41.42■■■■■ 4.22
TPD52-218ENST00000521354 RB1CC1Q8TDY2 1594 aa39.55■■■■□ 3.92
TPD52-218ENST00000521354 NACADO15069 1562 aa39.38■■■■□ 3.9
TPD52-218ENST00000521354 DCAF8L2P0C7V8 631 aa39.23■■■■□ 3.87
TPD52-218ENST00000521354 MYO15BQ96JP2 1530 aa38.98■■■■□ 3.83
TPD52-218ENST00000521354 ZCCHC6Q5VYS8 1495 aaKnown RBP38.8■■■■□ 3.8
TPD52-218ENST00000521354 UNC13AQ9UPW8 1703 aa38.66■■■■□ 3.78
TPD52-218ENST00000521354 PABPN1Q86U42 306 aaKnown RBP eCLIP38.62■■■■□ 3.77
TPD52-218ENST00000521354 DCAF1Q9Y4B6 1507 aa38.61■■■■□ 3.77
TPD52-218ENST00000521354 DNAJC5BQ9UF47 199 aa38.56■■■■□ 3.76
TPD52-218ENST00000521354 BICRAQ9NZM4 1560 aa38.44■■■■□ 3.74
TPD52-218ENST00000521354 SCRIBQ14160 1630 aa38.08■■■■□ 3.69
TPD52-218ENST00000521354 SHROOM4Q9ULL8 1493 aa37.92■■■■□ 3.66
TPD52-218ENST00000521354 EIF4G1Q04637 1599 aaKnown RBP37.44■■■■□ 3.58
TPD52-218ENST00000521354 CC2D2AQ9P2K1 1620 aa37.43■■■■□ 3.58
TPD52-218ENST00000521354 CECR2Q9BXF3 1484 aa37.26■■■■□ 3.56
TPD52-218ENST00000521354 NCAPD3P42695 1498 aa36.37■■■■□ 3.41
TPD52-218ENST00000521354 SMARCA4P51532 1647 aa36.36■■■■□ 3.41
TPD52-218ENST00000521354 ATAD2BQ9ULI0 1458 aa36.31■■■■□ 3.4
TPD52-218ENST00000521354 BAZ1AQ9NRL2 1556 aaPredicted RBP36.23■■■■□ 3.39
TPD52-218ENST00000521354 SMARCA2P51531 1590 aa36.21■■■■□ 3.39
TPD52-218ENST00000521354 HMGXB3Q12766 1538 aa36.13■■■■□ 3.37
TPD52-218ENST00000521354 MROH2BQ7Z745 1585 aa36.02■■■■□ 3.36
TPD52-218ENST00000521354 PEG3Q9GZU2 1588 aa36.02■■■■□ 3.36
TPD52-218ENST00000521354 BAZ1BQ9UIG0 1483 aaKnown RBP35.96■■■■□ 3.35
TPD52-218ENST00000521354 ERCC6Q03468 1493 aa35.7■■■■□ 3.31
TPD52-218ENST00000521354 NESP48681 1621 aa35.69■■■■□ 3.3
TPD52-218ENST00000521354 WIZO95785 1651 aa35.59■■■■□ 3.29
TPD52-218ENST00000521354 CUX2O14529 1486 aa35.53■■■■□ 3.28
TPD52-218ENST00000521354 LAMC3Q9Y6N6 1575 aa35.47■■■■□ 3.27
TPD52-218ENST00000521354 RSF1Q96T23 1441 aaPredicted RBP35.4■■■■□ 3.26
TPD52-218ENST00000521354 CADPSQ9ULU8 1353 aa35.27■■■■□ 3.24
TPD52-218ENST00000521354 PDS5BQ9NTI5 1447 aa35.25■■■■□ 3.23
TPD52-218ENST00000521354 THOC2Q8NI27 1593 aaKnown RBP35.25■■■■□ 3.23
TPD52-218ENST00000521354 KIF21AQ7Z4S6 1674 aa35.21■■■■□ 3.23
TPD52-218ENST00000521354 TOP2AP11388 1531 aaKnown RBP35.16■■■■□ 3.22
TPD52-218ENST00000521354 DNAJC5Q9H3Z4 198 aa35.11■■■■□ 3.21
TPD52-218ENST00000521354 CFTRP13569 1480 aa34.97■■■■□ 3.19
TPD52-218ENST00000521354 MRC2Q9UBG0 1479 aa34.94■■■■□ 3.18
TPD52-218ENST00000521354 FANCD2Q9BXW9 1451 aa34.87■■■■□ 3.17
TPD52-218ENST00000521354 CEP164Q9UPV0 1460 aa34.86■■■■□ 3.17
TPD52-218ENST00000521354 WDR62O43379 1518 aa34.86■■■■□ 3.17
TPD52-218ENST00000521354 CCDC88BA6NC98 1476 aa34.78■■■■□ 3.16
TPD52-218ENST00000521354 PRDM2Q13029 1718 aa34.59■■■■□ 3.13
TPD52-218ENST00000521354 URB2Q14146 1524 aaKnown RBP34.58■■■■□ 3.13
TPD52-218ENST00000521354 TOPBP1Q92547 1522 aa34.26■■■■□ 3.08
TPD52-218ENST00000521354 ABCC8Q09428 1581 aa34.18■■■■□ 3.06
TPD52-218ENST00000521354 DNMBPQ6XZF7 1577 aa34.16■■■■□ 3.06
TPD52-218ENST00000521354 IFT140Q96RY7 1462 aa34.16■■■■□ 3.06
TPD52-218ENST00000521354 ZNF608Q9ULD9 1512 aaPredicted RBP34.11■■■■□ 3.05
TPD52-218ENST00000521354 SUPT5HO00267 1087 aaKnown RBP34.07■■■■□ 3.04
TPD52-218ENST00000521354 OSCARQ8IYS5 282 aa33.96■■■■□ 3.03
TPD52-218ENST00000521354 POLA1P09884 1462 aaPredicted RBP33.95■■■■□ 3.02
TPD52-218ENST00000521354 TARBP1Q13395 1621 aaKnown RBP33.94■■■■□ 3.02
TPD52-218ENST00000521354 EIF4G3O43432 1585 aaKnown RBP33.91■■■■□ 3.02
TPD52-218ENST00000521354 AQRO60306 1485 aaKnown RBP eCLIP33.82■■■■□ 3.01
TPD52-218ENST00000521354 CUX1P39880 1505 aa33.82■■■■□ 3
TPD52-218ENST00000521354 RAD54L2Q9Y4B4 1467 aa33.81■■■■□ 3
TPD52-218ENST00000521354 SOGA1O94964 1423 aa33.78■■■■□ 3
TPD52-218ENST00000521354 FGD5Q6ZNL6 1462 aa33.77■■■■□ 3
TPD52-218ENST00000521354 TRIM41Q8WV44 630 aa33.69■■■□□ 2.98
TPD52-218ENST00000521354 TDRD9Q8NDG6 1382 aaKnown RBP33.68■■■□□ 2.98
TPD52-218ENST00000521354 WDR97A6NE52 1622 aa33.58■■■□□ 2.97
TPD52-218ENST00000521354 CHD1O14646 1710 aa33.57■■■□□ 2.96
TPD52-218ENST00000521354 FBLN2P98095 1184 aa33.49■■■□□ 2.95
TPD52-218ENST00000521354 RIMBP3CA6NJZ7 1639 aa33.49■■■□□ 2.95
TPD52-218ENST00000521354 RIMBP3BA6NNM3 1639 aa33.49■■■□□ 2.95
TPD52-218ENST00000521354 RIMBP3Q9UFD9 1639 aa33.49■■■□□ 2.95
TPD52-218ENST00000521354 SNAPC4Q5SXM2 1469 aa33.49■■■□□ 2.95
TPD52-218ENST00000521354 GRIN2BQ13224 1484 aa33.44■■■□□ 2.94
TPD52-218ENST00000521354 ARHGEF11O15085 1522 aa33.43■■■□□ 2.94
TPD52-218ENST00000521354 ABCA10Q8WWZ4 1543 aa33.42■■■□□ 2.94
TPD52-218ENST00000521354 MAGI1Q96QZ7 1491 aaPredicted RBP33.41■■■□□ 2.94
TPD52-218ENST00000521354 GAPVD1Q14C86 1478 aa33.37■■■□□ 2.93
TPD52-218ENST00000521354 WRNQ14191 1432 aaPredicted RBP eCLIP33.37■■■□□ 2.93
TPD52-218ENST00000521354 TOP2BQ02880 1626 aa33.35■■■□□ 2.93
TPD52-218ENST00000521354 BIVM-ERCC5R4GMW8 1640 aa33.35■■■□□ 2.93
TPD52-218ENST00000521354 SYNJ1O43426 1573 aa33.34■■■□□ 2.93
TPD52-218ENST00000521354 ABCA5Q8WWZ7 1642 aa33.34■■■□□ 2.93
TPD52-218ENST00000521354 PBRM1Q86U86 1689 aa33.32■■■□□ 2.92
TPD52-218ENST00000521354 CHMP7Q8WUX9 453 aaPredicted RBP33.31■■■□□ 2.92
TPD52-218ENST00000521354 SYNJ2O15056 1496 aa33.3■■■□□ 2.92
TPD52-218ENST00000521354 CLASP1Q7Z460 1538 aa33.23■■■□□ 2.91
TPD52-218ENST00000521354 CYB5RLQ6IPT4 315 aa33.15■■■□□ 2.9
TPD52-218ENST00000521354 ARAP1Q96P48 1450 aa33.14■■■□□ 2.9
TPD52-218ENST00000521354 ADAMTS12P58397 1594 aa33.05■■■□□ 2.88
TPD52-218ENST00000521354 GRIN2AQ12879 1464 aa33.02■■■□□ 2.88
TPD52-218ENST00000521354 ERICH3Q5RHP9 1530 aa32.99■■■□□ 2.87
TPD52-218ENST00000521354 FHAD1B1AJZ9 1412 aa32.96■■■□□ 2.87
TPD52-218ENST00000521354 NUP160Q12769 1436 aa32.91■■■□□ 2.86
TPD52-218ENST00000521354 CEP170Q5SW79 1584 aa32.9■■■□□ 2.86
TPD52-218ENST00000521354 ERCC6L2Q5T890 1561 aa32.75■■■□□ 2.83
TPD52-218ENST00000521354 SHROOM2Q13796 1616 aa32.71■■■□□ 2.83
TPD52-218ENST00000521354 KIF27Q86VH2 1401 aa32.7■■■□□ 2.83
TPD52-218ENST00000521354 IGF1RP08069 1367 aa32.68■■■□□ 2.82
TPD52-218ENST00000521354 TRHP20396 242 aaPredicted RBP32.63■■■□□ 2.81
TPD52-218ENST00000521354 RUSC2Q8N2Y8 1516 aa32.58■■■□□ 2.81
TPD52-218ENST00000521354 CUL7Q14999 1698 aa32.56■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms