RNA–Protein interactions for RNA: ENST00000521348.5

VDAC3-207, Transcript of voltage dependent anion channel 3, humanhuman

TSL 5

Gene VDAC3, Length 784 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3-207ENST00000521348 NISCHQ9Y2I1 1504 aa33.34■■■□□ 2.93
VDAC3-207ENST00000521348 ABCC9O60706 1549 aa30.42■■■□□ 2.46
VDAC3-207ENST00000521348 CCDC180Q9P1Z9 1646 aa30.21■■■□□ 2.43
VDAC3-207ENST00000521348 DNAJC5BQ9UF47 199 aa28.88■■■□□ 2.21
VDAC3-207ENST00000521348 RB1CC1Q8TDY2 1594 aa28.86■■■□□ 2.21
VDAC3-207ENST00000521348 NACADO15069 1562 aa28.58■■■□□ 2.17
VDAC3-207ENST00000521348 UNC13AQ9UPW8 1703 aa28.35■■■□□ 2.13
VDAC3-207ENST00000521348 PABPN1Q86U42 306 aaKnown RBP eCLIP28.16■■■□□ 2.1
VDAC3-207ENST00000521348 MYO15BQ96JP2 1530 aa28.12■■■□□ 2.09
VDAC3-207ENST00000521348 BICRAQ9NZM4 1560 aa28.1■■■□□ 2.09
VDAC3-207ENST00000521348 DCAF8L2P0C7V8 631 aa28.01■■■□□ 2.07
VDAC3-207ENST00000521348 SHROOM4Q9ULL8 1493 aa27.7■■■□□ 2.02
VDAC3-207ENST00000521348 DCAF1Q9Y4B6 1507 aa27.59■■■□□ 2.01
VDAC3-207ENST00000521348 ZCCHC6Q5VYS8 1495 aaKnown RBP27.58■■■□□ 2.01
VDAC3-207ENST00000521348 CC2D2AQ9P2K1 1620 aa27.55■■■□□ 2
VDAC3-207ENST00000521348 CECR2Q9BXF3 1484 aa27.47■■□□□ 1.99
VDAC3-207ENST00000521348 EIF4G1Q04637 1599 aaKnown RBP27.4■■□□□ 1.98
VDAC3-207ENST00000521348 SCRIBQ14160 1630 aa27.38■■□□□ 1.97
VDAC3-207ENST00000521348 DNAJC5Q9H3Z4 198 aa26.82■■□□□ 1.88
VDAC3-207ENST00000521348 CUX2O14529 1486 aa26.47■■□□□ 1.83
VDAC3-207ENST00000521348 NCAPD3P42695 1498 aa26.36■■□□□ 1.81
VDAC3-207ENST00000521348 ERCC6Q03468 1493 aa26.27■■□□□ 1.8
VDAC3-207ENST00000521348 ATAD2BQ9ULI0 1458 aa26.21■■□□□ 1.79
VDAC3-207ENST00000521348 HMGXB3Q12766 1538 aa26.19■■□□□ 1.78
VDAC3-207ENST00000521348 SMARCA2P51531 1590 aa26.14■■□□□ 1.78
VDAC3-207ENST00000521348 SMARCA4P51532 1647 aa26.14■■□□□ 1.77
VDAC3-207ENST00000521348 NESP48681 1621 aa26.05■■□□□ 1.76
VDAC3-207ENST00000521348 THOC2Q8NI27 1593 aaKnown RBP25.99■■□□□ 1.75
VDAC3-207ENST00000521348 PEG3Q9GZU2 1588 aa25.95■■□□□ 1.74
VDAC3-207ENST00000521348 BAZ1AQ9NRL2 1556 aaPredicted RBP25.91■■□□□ 1.74
VDAC3-207ENST00000521348 BAZ1BQ9UIG0 1483 aaKnown RBP25.91■■□□□ 1.74
VDAC3-207ENST00000521348 LAMC3Q9Y6N6 1575 aa25.87■■□□□ 1.73
VDAC3-207ENST00000521348 KIF21AQ7Z4S6 1674 aa25.8■■□□□ 1.72
VDAC3-207ENST00000521348 MROH2BQ7Z745 1585 aa25.67■■□□□ 1.7
VDAC3-207ENST00000521348 PDS5BQ9NTI5 1447 aa25.63■■□□□ 1.69
VDAC3-207ENST00000521348 WDR62O43379 1518 aa25.5■■□□□ 1.67
VDAC3-207ENST00000521348 MRC2Q9UBG0 1479 aa25.48■■□□□ 1.67
VDAC3-207ENST00000521348 CADPSQ9ULU8 1353 aa25.48■■□□□ 1.67
VDAC3-207ENST00000521348 WIZO95785 1651 aa25.36■■□□□ 1.65
VDAC3-207ENST00000521348 TRIM41Q8WV44 630 aa25.35■■□□□ 1.65
VDAC3-207ENST00000521348 CEP164Q9UPV0 1460 aa25.29■■□□□ 1.64
VDAC3-207ENST00000521348 FANCD2Q9BXW9 1451 aa25.21■■□□□ 1.63
VDAC3-207ENST00000521348 CFTRP13569 1480 aa25.17■■□□□ 1.62
VDAC3-207ENST00000521348 URB2Q14146 1524 aaKnown RBP25.07■■□□□ 1.6
VDAC3-207ENST00000521348 PRDM2Q13029 1718 aa25.04■■□□□ 1.6
VDAC3-207ENST00000521348 OSCARQ8IYS5 282 aa25.04■■□□□ 1.6
VDAC3-207ENST00000521348 TOP2AP11388 1531 aaKnown RBP25.02■■□□□ 1.6
VDAC3-207ENST00000521348 RSF1Q96T23 1441 aaPredicted RBP24.96■■□□□ 1.59
VDAC3-207ENST00000521348 RIMBP3CA6NJZ7 1639 aa24.92■■□□□ 1.58
VDAC3-207ENST00000521348 RIMBP3BA6NNM3 1639 aa24.92■■□□□ 1.58
VDAC3-207ENST00000521348 RIMBP3Q9UFD9 1639 aa24.92■■□□□ 1.58
VDAC3-207ENST00000521348 IFT140Q96RY7 1462 aa24.8■■□□□ 1.56
VDAC3-207ENST00000521348 ZNF608Q9ULD9 1512 aaPredicted RBP24.8■■□□□ 1.56
VDAC3-207ENST00000521348 ARHGEF11O15085 1522 aa24.78■■□□□ 1.56
VDAC3-207ENST00000521348 EIF4G3O43432 1585 aaKnown RBP24.71■■□□□ 1.55
VDAC3-207ENST00000521348 TOPBP1Q92547 1522 aa24.71■■□□□ 1.55
VDAC3-207ENST00000521348 CCDC88BA6NC98 1476 aa24.68■■□□□ 1.54
VDAC3-207ENST00000521348 CHD1O14646 1710 aa24.64■■□□□ 1.53
VDAC3-207ENST00000521348 DNMBPQ6XZF7 1577 aa24.63■■□□□ 1.53
VDAC3-207ENST00000521348 ABCC8Q09428 1581 aa24.62■■□□□ 1.53
VDAC3-207ENST00000521348 TARBP1Q13395 1621 aaKnown RBP24.61■■□□□ 1.53
VDAC3-207ENST00000521348 ARAP1Q96P48 1450 aa24.51■■□□□ 1.51
VDAC3-207ENST00000521348 AQRO60306 1485 aaKnown RBP eCLIP24.47■■□□□ 1.515e-7■■■■□ 22.7
VDAC3-207ENST00000521348 CYB5RLQ6IPT4 315 aa24.45■■□□□ 1.5
VDAC3-207ENST00000521348 POLA1P09884 1462 aaPredicted RBP24.45■■□□□ 1.5
VDAC3-207ENST00000521348 WDR97A6NE52 1622 aa24.35■■□□□ 1.49
VDAC3-207ENST00000521348 CLASP1Q7Z460 1538 aa24.33■■□□□ 1.49
VDAC3-207ENST00000521348 RAD54L2Q9Y4B4 1467 aa24.3■■□□□ 1.48
VDAC3-207ENST00000521348 SNAPC4Q5SXM2 1469 aa24.26■■□□□ 1.47
VDAC3-207ENST00000521348 TRHP20396 242 aaPredicted RBP24.25■■□□□ 1.47
VDAC3-207ENST00000521348 FBLN2P98095 1184 aa24.25■■□□□ 1.47
VDAC3-207ENST00000521348 SOGA1O94964 1423 aa24.24■■□□□ 1.47
VDAC3-207ENST00000521348 SYNJ1O43426 1573 aa24.22■■□□□ 1.47
VDAC3-207ENST00000521348 TDRD9Q8NDG6 1382 aaKnown RBP24.22■■□□□ 1.47
VDAC3-207ENST00000521348 FGD5Q6ZNL6 1462 aa24.21■■□□□ 1.47
VDAC3-207ENST00000521348 MAGI1Q96QZ7 1491 aaPredicted RBP24.21■■□□□ 1.47
VDAC3-207ENST00000521348 CUX1P39880 1505 aa24.15■■□□□ 1.46
VDAC3-207ENST00000521348 GRIN2BQ13224 1484 aa24.13■■□□□ 1.45
VDAC3-207ENST00000521348 PBRM1Q86U86 1689 aa24.12■■□□□ 1.45
VDAC3-207ENST00000521348 SYNJ2O15056 1496 aa24.12■■□□□ 1.45
VDAC3-207ENST00000521348 CHMP7Q8WUX9 453 aaPredicted RBP24.06■■□□□ 1.44
VDAC3-207ENST00000521348 ABCA5Q8WWZ7 1642 aa24.01■■□□□ 1.43
VDAC3-207ENST00000521348 GAPVD1Q14C86 1478 aa24■■□□□ 1.43
VDAC3-207ENST00000521348 ABCA10Q8WWZ4 1543 aa23.94■■□□□ 1.42
VDAC3-207ENST00000521348 ERCC6L2Q5T890 1561 aa23.87■■□□□ 1.41
VDAC3-207ENST00000521348 GRIN2AQ12879 1464 aa23.85■■□□□ 1.41
VDAC3-207ENST00000521348 AEBP2Q6ZN18 517 aaPredicted RBP23.84■■□□□ 1.41
VDAC3-207ENST00000521348 ADAMTS12P58397 1594 aa23.83■■□□□ 1.41
VDAC3-207ENST00000521348 CEP170Q5SW79 1584 aa23.82■■□□□ 1.4
VDAC3-207ENST00000521348 SHROOM2Q13796 1616 aa23.81■■□□□ 1.4
VDAC3-207ENST00000521348 NUP160Q12769 1436 aa23.81■■□□□ 1.4
VDAC3-207ENST00000521348 KIF13AQ9H1H9 1805 aa23.75■■□□□ 1.39
VDAC3-207ENST00000521348 BIVM-ERCC5R4GMW8 1640 aa23.73■■□□□ 1.39
VDAC3-207ENST00000521348 WRNQ14191 1432 aaPredicted RBP eCLIP23.69■■□□□ 1.38
VDAC3-207ENST00000521348 TOP2BQ02880 1626 aa23.69■■□□□ 1.38
VDAC3-207ENST00000521348 FHAD1B1AJZ9 1412 aa23.67■■□□□ 1.38
VDAC3-207ENST00000521348 ERICH3Q5RHP9 1530 aa23.65■■□□□ 1.38
VDAC3-207ENST00000521348 RUSC2Q8N2Y8 1516 aa23.53■■□□□ 1.36
VDAC3-207ENST00000521348 PRG4Q92954 1404 aaPredicted RBP23.51■■□□□ 1.35
VDAC3-207ENST00000521348 MAPKBP1O60336 1514 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms