RNA–Protein interactions for RNA: ENST00000521250.5

PTK2-230, Transcript of protein tyrosine kinase 2, humanhuman

TSL 4

Gene PTK2, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-230ENST00000521250 NISCHQ9Y2I1 1504 aa22.45■■□□□ 1.18
PTK2-230ENST00000521250 CCDC180Q9P1Z9 1646 aa19.76■□□□□ 0.75
PTK2-230ENST00000521250 ABCC9O60706 1549 aa19.08■□□□□ 0.64
PTK2-230ENST00000521250 ZCCHC6Q5VYS8 1495 aaKnown RBP18.76■□□□□ 0.59
PTK2-230ENST00000521250 DCAF8L2P0C7V8 631 aa18.71■□□□□ 0.59
PTK2-230ENST00000521250 DCAF1Q9Y4B6 1507 aa18.59■□□□□ 0.57
PTK2-230ENST00000521250 NACADO15069 1562 aa18.55■□□□□ 0.56
PTK2-230ENST00000521250 MYO15BQ96JP2 1530 aa18.54■□□□□ 0.56
PTK2-230ENST00000521250 RB1CC1Q8TDY2 1594 aa18.48■□□□□ 0.55
PTK2-230ENST00000521250 SCRIBQ14160 1630 aa18.07■□□□□ 0.48
PTK2-230ENST00000521250 UNC13AQ9UPW8 1703 aa17.98■□□□□ 0.47
PTK2-230ENST00000521250 SHROOM4Q9ULL8 1493 aa17.96■□□□□ 0.47
PTK2-230ENST00000521250 PABPN1Q86U42 306 aaKnown RBP eCLIP17.92■□□□□ 0.46
PTK2-230ENST00000521250 BICRAQ9NZM4 1560 aa17.88■□□□□ 0.45
PTK2-230ENST00000521250 CECR2Q9BXF3 1484 aa17.45■□□□□ 0.38
PTK2-230ENST00000521250 EIF4G1Q04637 1599 aaKnown RBP17.4■□□□□ 0.38
PTK2-230ENST00000521250 BAZ1AQ9NRL2 1556 aaPredicted RBP17.37■□□□□ 0.37
PTK2-230ENST00000521250 SMARCA4P51532 1647 aa17.32■□□□□ 0.36
PTK2-230ENST00000521250 MROH2BQ7Z745 1585 aa17.3■□□□□ 0.36
PTK2-230ENST00000521250 RSF1Q96T23 1441 aaPredicted RBP17.25■□□□□ 0.35
PTK2-230ENST00000521250 CC2D2AQ9P2K1 1620 aa17.24■□□□□ 0.35
PTK2-230ENST00000521250 DNAJC5BQ9UF47 199 aa17.23■□□□□ 0.35
PTK2-230ENST00000521250 ATAD2BQ9ULI0 1458 aa17.18■□□□□ 0.34
PTK2-230ENST00000521250 SMARCA2P51531 1590 aa17.16■□□□□ 0.34
PTK2-230ENST00000521250 PEG3Q9GZU2 1588 aa17.15■□□□□ 0.34
PTK2-230ENST00000521250 NCAPD3P42695 1498 aa17.13■□□□□ 0.33
PTK2-230ENST00000521250 SUPT5HO00267 1087 aaKnown RBP17.11■□□□□ 0.33
PTK2-230ENST00000521250 WIZO95785 1651 aa17.1■□□□□ 0.33
PTK2-230ENST00000521250 BAZ1BQ9UIG0 1483 aaKnown RBP17.05■□□□□ 0.32
PTK2-230ENST00000521250 HMGXB3Q12766 1538 aa17.04■□□□□ 0.32
PTK2-230ENST00000521250 TOP2AP11388 1531 aaKnown RBP16.96■□□□□ 0.31
PTK2-230ENST00000521250 CCDC88BA6NC98 1476 aa16.79■□□□□ 0.28
PTK2-230ENST00000521250 CADPSQ9ULU8 1353 aa16.66■□□□□ 0.26
PTK2-230ENST00000521250 CFTRP13569 1480 aa16.61■□□□□ 0.25
PTK2-230ENST00000521250 LAMC3Q9Y6N6 1575 aa16.6■□□□□ 0.25
PTK2-230ENST00000521250 NESP48681 1621 aa16.59■□□□□ 0.25
PTK2-230ENST00000521250 PDS5BQ9NTI5 1447 aa16.52■□□□□ 0.23
PTK2-230ENST00000521250 FANCD2Q9BXW9 1451 aa16.46■□□□□ 0.23
PTK2-230ENST00000521250 ERCC6Q03468 1493 aa16.42■□□□□ 0.22
PTK2-230ENST00000521250 PRDM2Q13029 1718 aa16.42■□□□□ 0.22
PTK2-230ENST00000521250 CEP164Q9UPV0 1460 aa16.4■□□□□ 0.22
PTK2-230ENST00000521250 KIF21AQ7Z4S6 1674 aa16.34■□□□□ 0.21
PTK2-230ENST00000521250 MRC2Q9UBG0 1479 aa16.3■□□□□ 0.2
PTK2-230ENST00000521250 ABCC8Q09428 1581 aa16.26■□□□□ 0.19
PTK2-230ENST00000521250 WRNQ14191 1432 aaPredicted RBP eCLIP16.26■□□□□ 0.19
PTK2-230ENST00000521250 URB2Q14146 1524 aaKnown RBP16.25■□□□□ 0.19
PTK2-230ENST00000521250 THOC2Q8NI27 1593 aaKnown RBP16.23■□□□□ 0.19
PTK2-230ENST00000521250 AEBP2Q6ZN18 517 aaPredicted RBP16.23■□□□□ 0.19
PTK2-230ENST00000521250 TOPBP1Q92547 1522 aa16.22■□□□□ 0.19
PTK2-230ENST00000521250 DNMBPQ6XZF7 1577 aa16.21■□□□□ 0.18
PTK2-230ENST00000521250 WDR62O43379 1518 aa16.2■□□□□ 0.18
PTK2-230ENST00000521250 CUX1P39880 1505 aa16.2■□□□□ 0.18
PTK2-230ENST00000521250 CHIC1Q5VXU3 224 aa16.16■□□□□ 0.18
PTK2-230ENST00000521250 SYNJ1O43426 1573 aa16.15■□□□□ 0.18
PTK2-230ENST00000521250 TRIM41Q8WV44 630 aa16.15■□□□□ 0.18
PTK2-230ENST00000521250 TOP2BQ02880 1626 aa16.14■□□□□ 0.17
PTK2-230ENST00000521250 BIVM-ERCC5R4GMW8 1640 aa16.12■□□□□ 0.17
PTK2-230ENST00000521250 CUX2O14529 1486 aa16.12■□□□□ 0.17
PTK2-230ENST00000521250 FGD5Q6ZNL6 1462 aa16.11■□□□□ 0.17
PTK2-230ENST00000521250 POLA1P09884 1462 aaPredicted RBP16.1■□□□□ 0.17
PTK2-230ENST00000521250 SOGA1O94964 1423 aa16.08■□□□□ 0.16
PTK2-230ENST00000521250 IFT140Q96RY7 1462 aa16.05■□□□□ 0.16
PTK2-230ENST00000521250 RAD54L2Q9Y4B4 1467 aa16.03■□□□□ 0.16
PTK2-230ENST00000521250 TARBP1Q13395 1621 aaKnown RBP15.98■□□□□ 0.15
PTK2-230ENST00000521250 ABCA10Q8WWZ4 1543 aa15.98■□□□□ 0.15
PTK2-230ENST00000521250 TDRD9Q8NDG6 1382 aaKnown RBP15.94■□□□□ 0.14
PTK2-230ENST00000521250 ZNF608Q9ULD9 1512 aaPredicted RBP15.93■□□□□ 0.14
PTK2-230ENST00000521250 KIF27Q86VH2 1401 aa15.91■□□□□ 0.14
PTK2-230ENST00000521250 AQRO60306 1485 aaKnown RBP eCLIP15.91■□□□□ 0.141e-6■■■□□ 14.8
PTK2-230ENST00000521250 WDR97A6NE52 1622 aa15.89■□□□□ 0.13
PTK2-230ENST00000521250 GAPVD1Q14C86 1478 aa15.88■□□□□ 0.13
PTK2-230ENST00000521250 EIF4G3O43432 1585 aaKnown RBP15.84■□□□□ 0.13
PTK2-230ENST00000521250 ABCA5Q8WWZ7 1642 aa15.84■□□□□ 0.13
PTK2-230ENST00000521250 GRIN2BQ13224 1484 aa15.84■□□□□ 0.13
PTK2-230ENST00000521250 RUSC2Q8N2Y8 1516 aa15.84■□□□□ 0.13
PTK2-230ENST00000521250 EEA1Q15075 1411 aa15.83■□□□□ 0.12
PTK2-230ENST00000521250 IGF1RP08069 1367 aa15.81■□□□□ 0.12
PTK2-230ENST00000521250 FAM9AQ8IZU1 332 aaPredicted RBP15.81■□□□□ 0.12
PTK2-230ENST00000521250 CSRNP3Q8WYN3 585 aa15.79■□□□□ 0.12
PTK2-230ENST00000521250 ERICH3Q5RHP9 1530 aa15.78■□□□□ 0.12
PTK2-230ENST00000521250 SNAPC4Q5SXM2 1469 aa15.75■□□□□ 0.11
PTK2-230ENST00000521250 PBRM1Q86U86 1689 aa15.75■□□□□ 0.11
PTK2-230ENST00000521250 MAGI1Q96QZ7 1491 aaPredicted RBP15.74■□□□□ 0.11
PTK2-230ENST00000521250 CARMIL1Q5VZK9 1371 aa15.73■□□□□ 0.11
PTK2-230ENST00000521250 FHAD1B1AJZ9 1412 aa15.72■□□□□ 0.11
PTK2-230ENST00000521250 CHMP7Q8WUX9 453 aaPredicted RBP15.7■□□□□ 0.1
PTK2-230ENST00000521250 FBLN2P98095 1184 aa15.69■□□□□ 0.1
PTK2-230ENST00000521250 CUL7Q14999 1698 aa15.68■□□□□ 0.1
PTK2-230ENST00000521250 SYNJ2O15056 1496 aa15.68■□□□□ 0.1
PTK2-230ENST00000521250 ADAMTS12P58397 1594 aa15.67■□□□□ 0.1
PTK2-230ENST00000521250 PRXQ9BXM0 1461 aa15.66■□□□□ 0.1
PTK2-230ENST00000521250 RAPGEF2Q9Y4G8 1499 aa15.65■□□□□ 0.1
PTK2-230ENST00000521250 GRIN2AQ12879 1464 aa15.61■□□□□ 0.09
PTK2-230ENST00000521250 KIF21BO75037 1637 aa15.58■□□□□ 0.09
PTK2-230ENST00000521250 OSCARQ8IYS5 282 aa15.58■□□□□ 0.08
PTK2-230ENST00000521250 EHMT2Q96KQ7 1210 aa15.56■□□□□ 0.08
PTK2-230ENST00000521250 CHD1O14646 1710 aa15.56■□□□□ 0.08
PTK2-230ENST00000521250 GOLGA3Q08378 1498 aa15.55■□□□□ 0.08
PTK2-230ENST00000521250 UBTFP17480 764 aaKnown RBP15.54■□□□□ 0.08
PTK2-230ENST00000521250 NUP160Q12769 1436 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 282.8 ms