RNA–Protein interactions for RNA: ENST00000521225.3

IKBKB-219, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 3

Gene IKBKB, Length 260 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-219ENST00000521225 NISCHQ9Y2I1 1504 aa16.23■□□□□ 0.19
IKBKB-219ENST00000521225 CCDC180Q9P1Z9 1646 aa14.22□□□□□ -0.13
IKBKB-219ENST00000521225 ZCCHC6Q5VYS8 1495 aaKnown RBP13.61□□□□□ -0.23
IKBKB-219ENST00000521225 DCAF1Q9Y4B6 1507 aa13.42□□□□□ -0.26
IKBKB-219ENST00000521225 ABCC9O60706 1549 aa13.4□□□□□ -0.26
IKBKB-219ENST00000521225 DCAF8L2P0C7V8 631 aa13.4□□□□□ -0.26
IKBKB-219ENST00000521225 MYO15BQ96JP2 1530 aa13.25□□□□□ -0.29
IKBKB-219ENST00000521225 SHROOM4Q9ULL8 1493 aa13.22□□□□□ -0.29
IKBKB-219ENST00000521225 NACADO15069 1562 aa13.21□□□□□ -0.29
IKBKB-219ENST00000521225 RB1CC1Q8TDY2 1594 aa13.11□□□□□ -0.31
IKBKB-219ENST00000521225 SCRIBQ14160 1630 aa13.04□□□□□ -0.32
IKBKB-219ENST00000521225 UNC13AQ9UPW8 1703 aa12.91□□□□□ -0.34
IKBKB-219ENST00000521225 SUPT5HO00267 1087 aaKnown RBP12.71□□□□□ -0.37
IKBKB-219ENST00000521225 BICRAQ9NZM4 1560 aa12.7□□□□□ -0.38
IKBKB-219ENST00000521225 PABPN1Q86U42 306 aaKnown RBP eCLIP12.61□□□□□ -0.39
IKBKB-219ENST00000521225 CECR2Q9BXF3 1484 aa12.59□□□□□ -0.39
IKBKB-219ENST00000521225 RSF1Q96T23 1441 aaPredicted RBP12.55□□□□□ -0.4
IKBKB-219ENST00000521225 BAZ1AQ9NRL2 1556 aaPredicted RBP12.54□□□□□ -0.4
IKBKB-219ENST00000521225 MROH2BQ7Z745 1585 aa12.53□□□□□ -0.4
IKBKB-219ENST00000521225 SMARCA4P51532 1647 aa12.5□□□□□ -0.41
IKBKB-219ENST00000521225 WIZO95785 1651 aa12.47□□□□□ -0.41
IKBKB-219ENST00000521225 PEG3Q9GZU2 1588 aa12.33□□□□□ -0.44
IKBKB-219ENST00000521225 TOP2AP11388 1531 aaKnown RBP12.32□□□□□ -0.44
IKBKB-219ENST00000521225 EIF4G1Q04637 1599 aaKnown RBP12.31□□□□□ -0.44
IKBKB-219ENST00000521225 SMARCA2P51531 1590 aa12.29□□□□□ -0.44
IKBKB-219ENST00000521225 ATAD2BQ9ULI0 1458 aa12.26□□□□□ -0.45
IKBKB-219ENST00000521225 BAZ1BQ9UIG0 1483 aaKnown RBP12.21□□□□□ -0.45
IKBKB-219ENST00000521225 CCDC88BA6NC98 1476 aa12.18□□□□□ -0.46
IKBKB-219ENST00000521225 HMGXB3Q12766 1538 aa12.16□□□□□ -0.46
IKBKB-219ENST00000521225 NCAPD3P42695 1498 aa12.15□□□□□ -0.46
IKBKB-219ENST00000521225 CHIC1Q5VXU3 224 aa12.15□□□□□ -0.46
IKBKB-219ENST00000521225 CC2D2AQ9P2K1 1620 aa12.15□□□□□ -0.47
IKBKB-219ENST00000521225 TRIM41Q8WV44 630 aa11.96□□□□□ -0.49
IKBKB-219ENST00000521225 PRDM2Q13029 1718 aa11.94□□□□□ -0.5
IKBKB-219ENST00000521225 ABCC8Q09428 1581 aa11.93□□□□□ -0.5
IKBKB-219ENST00000521225 CFTRP13569 1480 aa11.88□□□□□ -0.51
IKBKB-219ENST00000521225 CADPSQ9ULU8 1353 aa11.84□□□□□ -0.51
IKBKB-219ENST00000521225 WRNQ14191 1432 aaPredicted RBP eCLIP11.84□□□□□ -0.51
IKBKB-219ENST00000521225 SYNJ1O43426 1573 aa11.81□□□□□ -0.52
IKBKB-219ENST00000521225 DNAJC5BQ9UF47 199 aa11.79□□□□□ -0.52
IKBKB-219ENST00000521225 LAMC3Q9Y6N6 1575 aa11.79□□□□□ -0.52
IKBKB-219ENST00000521225 BIVM-ERCC5R4GMW8 1640 aa11.78□□□□□ -0.52
IKBKB-219ENST00000521225 TOP2BQ02880 1626 aa11.77□□□□□ -0.53
IKBKB-219ENST00000521225 NESP48681 1621 aa11.75□□□□□ -0.53
IKBKB-219ENST00000521225 CUX1P39880 1505 aa11.73□□□□□ -0.53
IKBKB-219ENST00000521225 FAM9AQ8IZU1 332 aaPredicted RBP11.73□□□□□ -0.53
IKBKB-219ENST00000521225 FANCD2Q9BXW9 1451 aa11.72□□□□□ -0.53
IKBKB-219ENST00000521225 LOC105371045A0A1W2PR82 267 aa11.69□□□□□ -0.54
IKBKB-219ENST00000521225 KIF21AQ7Z4S6 1674 aa11.68□□□□□ -0.54
IKBKB-219ENST00000521225 SOGA1O94964 1423 aa11.67□□□□□ -0.54
IKBKB-219ENST00000521225 EEA1Q15075 1411 aa11.67□□□□□ -0.54
IKBKB-219ENST00000521225 PDS5BQ9NTI5 1447 aa11.67□□□□□ -0.54
IKBKB-219ENST00000521225 CEP164Q9UPV0 1460 aa11.66□□□□□ -0.54
IKBKB-219ENST00000521225 DNMBPQ6XZF7 1577 aa11.64□□□□□ -0.55
IKBKB-219ENST00000521225 RUSC2Q8N2Y8 1516 aa11.64□□□□□ -0.55
IKBKB-219ENST00000521225 TOPBP1Q92547 1522 aa11.6□□□□□ -0.55
IKBKB-219ENST00000521225 FGD5Q6ZNL6 1462 aa11.6□□□□□ -0.55
IKBKB-219ENST00000521225 CSRNP3Q8WYN3 585 aa11.6□□□□□ -0.55
IKBKB-219ENST00000521225 URB2Q14146 1524 aaKnown RBP11.58□□□□□ -0.56
IKBKB-219ENST00000521225 EHMT2Q96KQ7 1210 aa11.57□□□□□ -0.56
IKBKB-219ENST00000521225 KIF27Q86VH2 1401 aa11.54□□□□□ -0.56
IKBKB-219ENST00000521225 KIF21BO75037 1637 aa11.54□□□□□ -0.56
IKBKB-219ENST00000521225 POLA1P09884 1462 aaPredicted RBP11.53□□□□□ -0.56
IKBKB-219ENST00000521225 MRC2Q9UBG0 1479 aa11.53□□□□□ -0.56
IKBKB-219ENST00000521225 CUX2O14529 1486 aa11.51□□□□□ -0.57
IKBKB-219ENST00000521225 WDR97A6NE52 1622 aa11.51□□□□□ -0.57
IKBKB-219ENST00000521225 GOLGA3Q08378 1498 aa11.51□□□□□ -0.57
IKBKB-219ENST00000521225 ERCC6Q03468 1493 aa11.5□□□□□ -0.57
IKBKB-219ENST00000521225 RAD54L2Q9Y4B4 1467 aa11.5□□□□□ -0.57
IKBKB-219ENST00000521225 ABCA10Q8WWZ4 1543 aa11.49□□□□□ -0.57
IKBKB-219ENST00000521225 WDR62O43379 1518 aa11.46□□□□□ -0.57
IKBKB-219ENST00000521225 TNIKQ9UKE5 1360 aa11.46□□□□□ -0.57
IKBKB-219ENST00000521225 UBTFP17480 764 aaKnown RBP11.46□□□□□ -0.57
IKBKB-219ENST00000521225 THOC2Q8NI27 1593 aaKnown RBP11.45□□□□□ -0.58
IKBKB-219ENST00000521225 ERICH3Q5RHP9 1530 aa11.45□□□□□ -0.58
IKBKB-219ENST00000521225 TARBP1Q13395 1621 aaKnown RBP11.45□□□□□ -0.58
IKBKB-219ENST00000521225 PRXQ9BXM0 1461 aa11.44□□□□□ -0.58
IKBKB-219ENST00000521225 RAPGEF2Q9Y4G8 1499 aa11.44□□□□□ -0.58
IKBKB-219ENST00000521225 IGF1RP08069 1367 aa11.42□□□□□ -0.58
IKBKB-219ENST00000521225 ABCA5Q8WWZ7 1642 aa11.42□□□□□ -0.58
IKBKB-219ENST00000521225 CUL7Q14999 1698 aa11.4□□□□□ -0.58
IKBKB-219ENST00000521225 CEP162Q5TB80 1403 aa11.4□□□□□ -0.58
IKBKB-219ENST00000521225 PBRM1Q86U86 1689 aa11.39□□□□□ -0.59
IKBKB-219ENST00000521225 GAPVD1Q14C86 1478 aa11.38□□□□□ -0.59
IKBKB-219ENST00000521225 CARMIL1Q5VZK9 1371 aa11.38□□□□□ -0.59
IKBKB-219ENST00000521225 TDRD9Q8NDG6 1382 aaKnown RBP11.38□□□□□ -0.59
IKBKB-219ENST00000521225 IFT140Q96RY7 1462 aa11.38□□□□□ -0.59
IKBKB-219ENST00000521225 CTTNBP2Q8WZ74 1663 aa11.31□□□□□ -0.6
IKBKB-219ENST00000521225 CLIP1P30622 1438 aa11.31□□□□□ -0.6
IKBKB-219ENST00000521225 AQRO60306 1485 aaKnown RBP eCLIP11.31□□□□□ -0.6
IKBKB-219ENST00000521225 ZNF608Q9ULD9 1512 aaPredicted RBP11.3□□□□□ -0.6
IKBKB-219ENST00000521225 EIF4G3O43432 1585 aaKnown RBP11.3□□□□□ -0.6
IKBKB-219ENST00000521225 GRIN2BQ13224 1484 aa11.29□□□□□ -0.6
IKBKB-219ENST00000521225 RANGAP1P46060 587 aaPredicted RBP11.27□□□□□ -0.61
IKBKB-219ENST00000521225 ADAMTS12P58397 1594 aa11.27□□□□□ -0.61
IKBKB-219ENST00000521225 FHAD1B1AJZ9 1412 aa11.25□□□□□ -0.61
IKBKB-219ENST00000521225 SNAPC4Q5SXM2 1469 aa11.21□□□□□ -0.61
IKBKB-219ENST00000521225 ARAP1Q96P48 1450 aa11.2□□□□□ -0.62
IKBKB-219ENST00000521225 MAGI1Q96QZ7 1491 aaPredicted RBP11.2□□□□□ -0.62
IKBKB-219ENST00000521225 ARHGAP35Q9NRY4 1499 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms