RNA–Protein interactions for RNA: ENST00000521151.1

MCM4-212, Transcript of minichromosome maintenance complex component 4, humanhuman

TSL 2

Gene MCM4, Length 1,125 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-212ENST00000521151 AEBP2Q6ZN18 517 aaPredicted RBP22.47■■□□□ 1.19
MCM4-212ENST00000521151 CHIC1Q5VXU3 224 aa22.17■■□□□ 1.14
MCM4-212ENST00000521151 NISCHQ9Y2I1 1504 aa22.07■■□□□ 1.12
MCM4-212ENST00000521151 ABCC9O60706 1549 aa20.38■□□□□ 0.85
MCM4-212ENST00000521151 CCDC180Q9P1Z9 1646 aa19.98■□□□□ 0.79
MCM4-212ENST00000521151 PHF23Q9BUL5 403 aaPredicted RBP19.52■□□□□ 0.72
MCM4-212ENST00000521151 DNAJC5BQ9UF47 199 aa19.48■□□□□ 0.71
MCM4-212ENST00000521151 RB1CC1Q8TDY2 1594 aa19.21■□□□□ 0.67
MCM4-212ENST00000521151 SENP3Q9H4L4 574 aaPredicted RBP19.09■□□□□ 0.65
MCM4-212ENST00000521151 NACADO15069 1562 aa18.98■□□□□ 0.63
MCM4-212ENST00000521151 PABPN1Q86U42 306 aaKnown RBP eCLIP18.93■□□□□ 0.62
MCM4-212ENST00000521151 DCAF8L2P0C7V8 631 aa18.84■□□□□ 0.61
MCM4-212ENST00000521151 UNC13AQ9UPW8 1703 aa18.83■□□□□ 0.61
MCM4-212ENST00000521151 BICRAQ9NZM4 1560 aa18.68■□□□□ 0.58
MCM4-212ENST00000521151 MYO15BQ96JP2 1530 aa18.55■□□□□ 0.56
MCM4-212ENST00000521151 CC2D2AQ9P2K1 1620 aa18.4■□□□□ 0.54
MCM4-212ENST00000521151 CECR2Q9BXF3 1484 aa18.39■□□□□ 0.54
MCM4-212ENST00000521151 SHROOM4Q9ULL8 1493 aa18.33■□□□□ 0.53
MCM4-212ENST00000521151 EIF4G1Q04637 1599 aaKnown RBP18.25■□□□□ 0.51
MCM4-212ENST00000521151 ZCCHC6Q5VYS8 1495 aaKnown RBP18.2■□□□□ 0.5
MCM4-212ENST00000521151 SCRIBQ14160 1630 aa18.2■□□□□ 0.5
MCM4-212ENST00000521151 DCAF1Q9Y4B6 1507 aa18.18■□□□□ 0.5
MCM4-212ENST00000521151 PLPPR3Q6T4P5 718 aa18.17■□□□□ 0.5
MCM4-212ENST00000521151 DNAJC5Q9H3Z4 198 aa18.16■□□□□ 0.5
MCM4-212ENST00000521151 CUX2O14529 1486 aa17.71■□□□□ 0.43
MCM4-212ENST00000521151 FOXD1Q16676 465 aa17.67■□□□□ 0.42
MCM4-212ENST00000521151 ERCC6Q03468 1493 aa17.63■□□□□ 0.41
MCM4-212ENST00000521151 NCAPD3P42695 1498 aa17.51■□□□□ 0.39
MCM4-212ENST00000521151 ATAD2BQ9ULI0 1458 aa17.43■□□□□ 0.38
MCM4-212ENST00000521151 NESP48681 1621 aa17.4■□□□□ 0.38
MCM4-212ENST00000521151 HMGXB3Q12766 1538 aa17.35■□□□□ 0.37
MCM4-212ENST00000521151 SMARCA2P51531 1590 aa17.35■□□□□ 0.37
MCM4-212ENST00000521151 SMARCA4P51532 1647 aa17.31■□□□□ 0.36
MCM4-212ENST00000521151 THOC2Q8NI27 1593 aaKnown RBP17.3■□□□□ 0.36
MCM4-212ENST00000521151 TRIM41Q8WV44 630 aa17.24■□□□□ 0.35
MCM4-212ENST00000521151 BAZ1BQ9UIG0 1483 aaKnown RBP17.23■□□□□ 0.35
MCM4-212ENST00000521151 LAMC3Q9Y6N6 1575 aa17.19■□□□□ 0.34
MCM4-212ENST00000521151 KIF21AQ7Z4S6 1674 aa17.19■□□□□ 0.34
MCM4-212ENST00000521151 BAZ1AQ9NRL2 1556 aaPredicted RBP17.15■□□□□ 0.34
MCM4-212ENST00000521151 ADRA2BP18089 450 aa17.15■□□□□ 0.34
MCM4-212ENST00000521151 PPP6R1Q9UPN7 881 aa17.14■□□□□ 0.33
MCM4-212ENST00000521151 PEG3Q9GZU2 1588 aa17.12■□□□□ 0.33
MCM4-212ENST00000521151 PDS5BQ9NTI5 1447 aa17.11■□□□□ 0.33
MCM4-212ENST00000521151 MROH2BQ7Z745 1585 aa17.01■□□□□ 0.31
MCM4-212ENST00000521151 MRC2Q9UBG0 1479 aa16.99■□□□□ 0.31
MCM4-212ENST00000521151 CADPSQ9ULU8 1353 aa16.98■□□□□ 0.31
MCM4-212ENST00000521151 WDR62O43379 1518 aa16.96■□□□□ 0.31
MCM4-212ENST00000521151 OSCARQ8IYS5 282 aa16.85■□□□□ 0.29
MCM4-212ENST00000521151 CEP164Q9UPV0 1460 aa16.85■□□□□ 0.29
MCM4-212ENST00000521151 WIZO95785 1651 aa16.81■□□□□ 0.28
MCM4-212ENST00000521151 FANCD2Q9BXW9 1451 aa16.8■□□□□ 0.28
MCM4-212ENST00000521151 PIAS4Q8N2W9 510 aaPredicted RBP16.74■□□□□ 0.27
MCM4-212ENST00000521151 CFTRP13569 1480 aa16.69■□□□□ 0.26
MCM4-212ENST00000521151 RIMBP3CA6NJZ7 1639 aa16.69■□□□□ 0.26
MCM4-212ENST00000521151 RIMBP3BA6NNM3 1639 aa16.69■□□□□ 0.26
MCM4-212ENST00000521151 RIMBP3Q9UFD9 1639 aa16.69■□□□□ 0.26
MCM4-212ENST00000521151 URB2Q14146 1524 aaKnown RBP16.68■□□□□ 0.26
MCM4-212ENST00000521151 ARHGEF11O15085 1522 aa16.58■□□□□ 0.24
MCM4-212ENST00000521151 ZNF608Q9ULD9 1512 aaPredicted RBP16.55■□□□□ 0.24
MCM4-212ENST00000521151 PRDM2Q13029 1718 aa16.54■□□□□ 0.24
MCM4-212ENST00000521151 TOP2AP11388 1531 aaKnown RBP16.54■□□□□ 0.24
MCM4-212ENST00000521151 IFT140Q96RY7 1462 aa16.52■□□□□ 0.23
MCM4-212ENST00000521151 CYB5RLQ6IPT4 315 aa16.51■□□□□ 0.23
MCM4-212ENST00000521151 RSF1Q96T23 1441 aaPredicted RBP16.5■□□□□ 0.23
MCM4-212ENST00000521151 TRHP20396 242 aaPredicted RBP16.46■□□□□ 0.23
MCM4-212ENST00000521151 EIF4G3O43432 1585 aaKnown RBP16.43■□□□□ 0.22
MCM4-212ENST00000521151 TOPBP1Q92547 1522 aa16.43■□□□□ 0.22
MCM4-212ENST00000521151 CHD1O14646 1710 aa16.42■□□□□ 0.22
MCM4-212ENST00000521151 ARAP1Q96P48 1450 aa16.4■□□□□ 0.22
MCM4-212ENST00000521151 KCNA4P22459 653 aa16.39■□□□□ 0.21
MCM4-212ENST00000521151 CCDC88BA6NC98 1476 aa16.36■□□□□ 0.21
MCM4-212ENST00000521151 ABCC8Q09428 1581 aa16.35■□□□□ 0.21
MCM4-212ENST00000521151 AQRO60306 1485 aaKnown RBP eCLIP16.35■□□□□ 0.21
MCM4-212ENST00000521151 FBLN2P98095 1184 aa16.34■□□□□ 0.21
MCM4-212ENST00000521151 DNMBPQ6XZF7 1577 aa16.33■□□□□ 0.2
MCM4-212ENST00000521151 TARBP1Q13395 1621 aaKnown RBP16.31■□□□□ 0.2
MCM4-212ENST00000521151 MSH5O43196 834 aa16.26■□□□□ 0.19
MCM4-212ENST00000521151 POLA1P09884 1462 aaPredicted RBP16.24■□□□□ 0.19
MCM4-212ENST00000521151 RAD54L2Q9Y4B4 1467 aa16.2■□□□□ 0.18
MCM4-212ENST00000521151 TDRD9Q8NDG6 1382 aaKnown RBP16.18■□□□□ 0.18
MCM4-212ENST00000521151 CLASP1Q7Z460 1538 aa16.18■□□□□ 0.18
MCM4-212ENST00000521151 SNAPC4Q5SXM2 1469 aa16.17■□□□□ 0.18
MCM4-212ENST00000521151 SOGA1O94964 1423 aa16.16■□□□□ 0.18
MCM4-212ENST00000521151 SYNJ1O43426 1573 aa16.14■□□□□ 0.17
MCM4-212ENST00000521151 CHMP7Q8WUX9 453 aaPredicted RBP16.14■□□□□ 0.17
MCM4-212ENST00000521151 WDR97A6NE52 1622 aa16.11■□□□□ 0.17
MCM4-212ENST00000521151 PPP4R3CPQ6ZMV5 832 aa16.1■□□□□ 0.17
MCM4-212ENST00000521151 MAGI1Q96QZ7 1491 aaPredicted RBP16.09■□□□□ 0.17
MCM4-212ENST00000521151 FGD5Q6ZNL6 1462 aa16.08■□□□□ 0.16
MCM4-212ENST00000521151 GRIN2BQ13224 1484 aa16.05■□□□□ 0.16
MCM4-212ENST00000521151 SYNJ2O15056 1496 aa16.04■□□□□ 0.16
MCM4-212ENST00000521151 GAPVD1Q14C86 1478 aa16.04■□□□□ 0.16
MCM4-212ENST00000521151 CUX1P39880 1505 aa16■□□□□ 0.15
MCM4-212ENST00000521151 PBRM1Q86U86 1689 aa16■□□□□ 0.15
MCM4-212ENST00000521151 ERCC6L2Q5T890 1561 aa15.92■□□□□ 0.14
MCM4-212ENST00000521151 EHMT2Q96KQ7 1210 aa15.89■□□□□ 0.13
MCM4-212ENST00000521151 ABCA5Q8WWZ7 1642 aa15.89■□□□□ 0.13
MCM4-212ENST00000521151 ABCA10Q8WWZ4 1543 aa15.87■□□□□ 0.13
MCM4-212ENST00000521151 GRIN2AQ12879 1464 aa15.85■□□□□ 0.13
MCM4-212ENST00000521151 CEP170Q5SW79 1584 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms