RNA–Protein interactions for RNA: ENST00000521074.1

LINC01553-203, Transcript of long intergenic non-protein coding RNA 1553, humanhuman

TSL 1 (best) BASIC

Gene LINC01553, Length 4,329 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01553-203ENST00000521074 NISCHQ9Y2I1 1504 aa13.59□□□□□ -0.23
LINC01553-203ENST00000521074 CCDC180Q9P1Z9 1646 aa12.25□□□□□ -0.45
LINC01553-203ENST00000521074 MYO15BQ96JP2 1530 aa11.53□□□□□ -0.56
LINC01553-203ENST00000521074 DCAF1Q9Y4B6 1507 aa11.48□□□□□ -0.57
LINC01553-203ENST00000521074 ZCCHC6Q5VYS8 1495 aaKnown RBP11.41□□□□□ -0.58
LINC01553-203ENST00000521074 ABCC9O60706 1549 aa11.38□□□□□ -0.59
LINC01553-203ENST00000521074 NACADO15069 1562 aa11.37□□□□□ -0.59
LINC01553-203ENST00000521074 RB1CC1Q8TDY2 1594 aa11.29□□□□□ -0.6
LINC01553-203ENST00000521074 UNC13AQ9UPW8 1703 aa11.11□□□□□ -0.63
LINC01553-203ENST00000521074 SHROOM4Q9ULL8 1493 aa11.1□□□□□ -0.63
LINC01553-203ENST00000521074 BICRAQ9NZM4 1560 aa10.98□□□□□ -0.65
LINC01553-203ENST00000521074 SCRIBQ14160 1630 aa10.84□□□□□ -0.67
LINC01553-203ENST00000521074 DCAF8L2P0C7V8 631 aa10.63□□□□□ -0.71
LINC01553-203ENST00000521074 PEG3Q9GZU2 1588 aa10.61□□□□□ -0.71
LINC01553-203ENST00000521074 EIF4G1Q04637 1599 aaKnown RBP10.61□□□□□ -0.71
LINC01553-203ENST00000521074 SMARCA4P51532 1647 aa10.55□□□□□ -0.72
LINC01553-203ENST00000521074 BAZ1AQ9NRL2 1556 aaPredicted RBP10.54□□□□□ -0.72
LINC01553-203ENST00000521074 CC2D2AQ9P2K1 1620 aa10.5□□□□□ -0.73
LINC01553-203ENST00000521074 HMGXB3Q12766 1538 aa10.48□□□□□ -0.73
LINC01553-203ENST00000521074 PABPN1Q86U42 306 aaKnown RBP eCLIP10.48□□□□□ -0.73
LINC01553-203ENST00000521074 SMARCA2P51531 1590 aa10.46□□□□□ -0.73
LINC01553-203ENST00000521074 NCAPD3P42695 1498 aa10.44□□□□□ -0.74
LINC01553-203ENST00000521074 CECR2Q9BXF3 1484 aa10.42□□□□□ -0.74
LINC01553-203ENST00000521074 MROH2BQ7Z745 1585 aa10.39□□□□□ -0.75
LINC01553-203ENST00000521074 ATAD2BQ9ULI0 1458 aa10.39□□□□□ -0.75
LINC01553-203ENST00000521074 RSF1Q96T23 1441 aaPredicted RBP10.31□□□□□ -0.76
LINC01553-203ENST00000521074 TOP2AP11388 1531 aaKnown RBP10.3□□□□□ -0.76
LINC01553-203ENST00000521074 WIZO95785 1651 aa10.28□□□□□ -0.76
LINC01553-203ENST00000521074 DNAJC5BQ9UF47 199 aa10.28□□□□□ -0.76
LINC01553-203ENST00000521074 BAZ1BQ9UIG0 1483 aaKnown RBP10.25□□□□□ -0.77
LINC01553-203ENST00000521074 PRDM2Q13029 1718 aa10.22□□□□□ -0.77
LINC01553-203ENST00000521074 LAMC3Q9Y6N6 1575 aa10.18□□□□□ -0.78
LINC01553-203ENST00000521074 CFTRP13569 1480 aa10.08□□□□□ -0.8
LINC01553-203ENST00000521074 CCDC88BA6NC98 1476 aa10.05□□□□□ -0.8
LINC01553-203ENST00000521074 CADPSQ9ULU8 1353 aa10.02□□□□□ -0.81
LINC01553-203ENST00000521074 THOC2Q8NI27 1593 aaKnown RBP10.02□□□□□ -0.81
LINC01553-203ENST00000521074 KIF21AQ7Z4S6 1674 aa9.99□□□□□ -0.81
LINC01553-203ENST00000521074 WDR62O43379 1518 aa9.96□□□□□ -0.81
LINC01553-203ENST00000521074 PDS5BQ9NTI5 1447 aa9.95□□□□□ -0.82
LINC01553-203ENST00000521074 CUX2O14529 1486 aa9.93□□□□□ -0.82
LINC01553-203ENST00000521074 NESP48681 1621 aa9.93□□□□□ -0.82
LINC01553-203ENST00000521074 WDR97A6NE52 1622 aa9.9□□□□□ -0.82
LINC01553-203ENST00000521074 ABCC8Q09428 1581 aa9.89□□□□□ -0.83
LINC01553-203ENST00000521074 MRC2Q9UBG0 1479 aa9.89□□□□□ -0.83
LINC01553-203ENST00000521074 FANCD2Q9BXW9 1451 aa9.89□□□□□ -0.83
LINC01553-203ENST00000521074 CEP164Q9UPV0 1460 aa9.88□□□□□ -0.83
LINC01553-203ENST00000521074 BIVM-ERCC5R4GMW8 1640 aa9.87□□□□□ -0.83
LINC01553-203ENST00000521074 DNMBPQ6XZF7 1577 aa9.87□□□□□ -0.83
LINC01553-203ENST00000521074 URB2Q14146 1524 aaKnown RBP9.83□□□□□ -0.84
LINC01553-203ENST00000521074 TOP2BQ02880 1626 aa9.81□□□□□ -0.84
LINC01553-203ENST00000521074 ERCC6Q03468 1493 aa9.8□□□□□ -0.84
LINC01553-203ENST00000521074 TOPBP1Q92547 1522 aa9.79□□□□□ -0.84
LINC01553-203ENST00000521074 TARBP1Q13395 1621 aaKnown RBP9.79□□□□□ -0.84
LINC01553-203ENST00000521074 CUX1P39880 1505 aa9.77□□□□□ -0.85
LINC01553-203ENST00000521074 IFT140Q96RY7 1462 aa9.73□□□□□ -0.85
LINC01553-203ENST00000521074 SYNJ1O43426 1573 aa9.72□□□□□ -0.85
LINC01553-203ENST00000521074 ABCA5Q8WWZ7 1642 aa9.71□□□□□ -0.86
LINC01553-203ENST00000521074 POLA1P09884 1462 aaPredicted RBP9.7□□□□□ -0.86
LINC01553-203ENST00000521074 ABCA10Q8WWZ4 1543 aa9.69□□□□□ -0.86
LINC01553-203ENST00000521074 SUPT5HO00267 1087 aaKnown RBP9.68□□□□□ -0.86
LINC01553-203ENST00000521074 WRNQ14191 1432 aaPredicted RBP eCLIP9.67□□□□□ -0.86
LINC01553-203ENST00000521074 FGD5Q6ZNL6 1462 aa9.66□□□□□ -0.86
LINC01553-203ENST00000521074 EIF4G3O43432 1585 aaKnown RBP9.66□□□□□ -0.86
LINC01553-203ENST00000521074 PBRM1Q86U86 1689 aa9.64□□□□□ -0.87
LINC01553-203ENST00000521074 ERICH3Q5RHP9 1530 aa9.61□□□□□ -0.87
LINC01553-203ENST00000521074 CUL7Q14999 1698 aa9.58□□□□□ -0.88
LINC01553-203ENST00000521074 MAGI1Q96QZ7 1491 aaPredicted RBP9.58□□□□□ -0.88
LINC01553-203ENST00000521074 SOGA1O94964 1423 aa9.57□□□□□ -0.88
LINC01553-203ENST00000521074 ADAMTS12P58397 1594 aa9.56□□□□□ -0.88
LINC01553-203ENST00000521074 ZNF608Q9ULD9 1512 aaPredicted RBP9.55□□□□□ -0.88
LINC01553-203ENST00000521074 GRIN2BQ13224 1484 aa9.54□□□□□ -0.88
LINC01553-203ENST00000521074 DNAJC5Q9H3Z4 198 aa9.54□□□□□ -0.88
LINC01553-203ENST00000521074 RAD54L2Q9Y4B4 1467 aa9.53□□□□□ -0.88
LINC01553-203ENST00000521074 GAPVD1Q14C86 1478 aa9.51□□□□□ -0.89
LINC01553-203ENST00000521074 CHD1O14646 1710 aa9.5□□□□□ -0.89
LINC01553-203ENST00000521074 EEA1Q15075 1411 aa9.5□□□□□ -0.89
LINC01553-203ENST00000521074 CLASP1Q7Z460 1538 aa9.49□□□□□ -0.89
LINC01553-203ENST00000521074 SYNJ2O15056 1496 aa9.49□□□□□ -0.89
LINC01553-203ENST00000521074 SHROOM2Q13796 1616 aa9.48□□□□□ -0.89
LINC01553-203ENST00000521074 KIF27Q86VH2 1401 aa9.46□□□□□ -0.89
LINC01553-203ENST00000521074 FHAD1B1AJZ9 1412 aa9.46□□□□□ -0.9
LINC01553-203ENST00000521074 SNAPC4Q5SXM2 1469 aa9.45□□□□□ -0.9
LINC01553-203ENST00000521074 NUP160Q12769 1436 aa9.45□□□□□ -0.9
LINC01553-203ENST00000521074 AQRO60306 1485 aaKnown RBP eCLIP9.44□□□□□ -0.9
LINC01553-203ENST00000521074 KIF21BO75037 1637 aa9.44□□□□□ -0.9
LINC01553-203ENST00000521074 RUSC2Q8N2Y8 1516 aa9.43□□□□□ -0.9
LINC01553-203ENST00000521074 PRXQ9BXM0 1461 aa9.43□□□□□ -0.9
LINC01553-203ENST00000521074 GRIN2AQ12879 1464 aa9.42□□□□□ -0.9
LINC01553-203ENST00000521074 IGF1RP08069 1367 aa9.41□□□□□ -0.9
LINC01553-203ENST00000521074 CEP170Q5SW79 1584 aa9.4□□□□□ -0.9
LINC01553-203ENST00000521074 CTTNBP2Q8WZ74 1663 aa9.4□□□□□ -0.9
LINC01553-203ENST00000521074 TDRD9Q8NDG6 1382 aaKnown RBP9.39□□□□□ -0.91
LINC01553-203ENST00000521074 AEBP2Q6ZN18 517 aaPredicted RBP9.37□□□□□ -0.91
LINC01553-203ENST00000521074 RAPGEF2Q9Y4G8 1499 aa9.34□□□□□ -0.91
LINC01553-203ENST00000521074 UGGT2Q9NYU1 1516 aa9.34□□□□□ -0.91
LINC01553-203ENST00000521074 KIAA0586Q9BVV6 1533 aa9.33□□□□□ -0.92
LINC01553-203ENST00000521074 CHIC1Q5VXU3 224 aa9.33□□□□□ -0.92
LINC01553-203ENST00000521074 PELP1Q8IZL8 1130 aaKnown RBP9.31□□□□□ -0.92
LINC01553-203ENST00000521074 SAMD9Q5K651 1589 aa9.31□□□□□ -0.92
LINC01553-203ENST00000521074 IQGAP2Q13576 1575 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms