RNA–Protein interactions for RNA: ENST00000521029.5

PTK2-227, Transcript of protein tyrosine kinase 2, humanhuman

TSL 4

Gene PTK2, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-227ENST00000521029 CHIC1Q5VXU3 224 aa21.84■■□□□ 1.09
PTK2-227ENST00000521029 AEBP2Q6ZN18 517 aaPredicted RBP21.63■■□□□ 1.05
PTK2-227ENST00000521029 PHF23Q9BUL5 403 aaPredicted RBP19.24■□□□□ 0.67
PTK2-227ENST00000521029 NISCHQ9Y2I1 1504 aa19.18■□□□□ 0.66
PTK2-227ENST00000521029 SENP3Q9H4L4 574 aaPredicted RBP18.34■□□□□ 0.53
PTK2-227ENST00000521029 PLPPR3Q6T4P5 718 aa18.08■□□□□ 0.48
PTK2-227ENST00000521029 ABCC9O60706 1549 aa17.72■□□□□ 0.43
PTK2-227ENST00000521029 CCDC180Q9P1Z9 1646 aa17.35■□□□□ 0.37
PTK2-227ENST00000521029 DNAJC5BQ9UF47 199 aa17■□□□□ 0.31
PTK2-227ENST00000521029 FOXD1Q16676 465 aa16.89■□□□□ 0.29
PTK2-227ENST00000521029 ADRA2BP18089 450 aa16.84■□□□□ 0.29
PTK2-227ENST00000521029 PPP6R1Q9UPN7 881 aa16.76■□□□□ 0.27
PTK2-227ENST00000521029 RB1CC1Q8TDY2 1594 aa16.64■□□□□ 0.25
PTK2-227ENST00000521029 PABPN1Q86U42 306 aaKnown RBP eCLIP16.46■□□□□ 0.23
PTK2-227ENST00000521029 UNC13AQ9UPW8 1703 aa16.45■□□□□ 0.22
PTK2-227ENST00000521029 NACADO15069 1562 aa16.44■□□□□ 0.22
PTK2-227ENST00000521029 KCNA4P22459 653 aa16.35■□□□□ 0.21
PTK2-227ENST00000521029 DCAF8L2P0C7V8 631 aa16.32■□□□□ 0.2
PTK2-227ENST00000521029 BICRAQ9NZM4 1560 aa16.3■□□□□ 0.2
PTK2-227ENST00000521029 PIAS4Q8N2W9 510 aaPredicted RBP16.13■□□□□ 0.17
PTK2-227ENST00000521029 MYO15BQ96JP2 1530 aa16.07■□□□□ 0.16
PTK2-227ENST00000521029 EHMT2Q96KQ7 1210 aa16.05■□□□□ 0.16
PTK2-227ENST00000521029 PPP4R3CPQ6ZMV5 832 aa16■□□□□ 0.15
PTK2-227ENST00000521029 CC2D2AQ9P2K1 1620 aa16■□□□□ 0.15
PTK2-227ENST00000521029 CECR2Q9BXF3 1484 aa15.96■□□□□ 0.14
PTK2-227ENST00000521029 EIF4G1Q04637 1599 aaKnown RBP15.85■□□□□ 0.13
PTK2-227ENST00000521029 SCRIBQ14160 1630 aa15.84■□□□□ 0.13
PTK2-227ENST00000521029 NCBP3Q53F19 620 aaKnown RBP15.84■□□□□ 0.13
PTK2-227ENST00000521029 SHROOM4Q9ULL8 1493 aa15.84■□□□□ 0.13
PTK2-227ENST00000521029 ZCCHC6Q5VYS8 1495 aaKnown RBP15.82■□□□□ 0.12
PTK2-227ENST00000521029 DCAF1Q9Y4B6 1507 aa15.77■□□□□ 0.11
PTK2-227ENST00000521029 SLC4A1APQ9BWU0 796 aaKnown RBP15.74■□□□□ 0.11
PTK2-227ENST00000521029 DNAJC5Q9H3Z4 198 aa15.74■□□□□ 0.11
PTK2-227ENST00000521029 CSRNP3Q8WYN3 585 aa15.53■□□□□ 0.08
PTK2-227ENST00000521029 NPM3O75607 178 aaKnown RBP15.52■□□□□ 0.08
PTK2-227ENST00000521029 SCAF1Q9H7N4 1312 aaKnown RBP15.48■□□□□ 0.07
PTK2-227ENST00000521029 CNKSR2Q8WXI2 1034 aa15.42■□□□□ 0.06
PTK2-227ENST00000521029 MSH5O43196 834 aa15.37■□□□□ 0.05
PTK2-227ENST00000521029 CUX2O14529 1486 aa15.31■□□□□ 0.04
PTK2-227ENST00000521029 ERCC6Q03468 1493 aa15.23■□□□□ 0.03
PTK2-227ENST00000521029 NCAPD3P42695 1498 aa15.2■□□□□ 0.02
PTK2-227ENST00000521029 NESP48681 1621 aa15.17■□□□□ 0.02
PTK2-227ENST00000521029 ATAD2BQ9ULI0 1458 aa15.13■□□□□ 0.01
PTK2-227ENST00000521029 SMARCA4P51532 1647 aa15.06■□□□□ 0
PTK2-227ENST00000521029 THOC2Q8NI27 1593 aaKnown RBP15.05■□□□□ -0
PTK2-227ENST00000521029 HMGXB3Q12766 1538 aa15.04■□□□□ -0
PTK2-227ENST00000521029 MAPK8IP2Q13387 824 aaPredicted RBP15.04■□□□□ -0
PTK2-227ENST00000521029 ZBTB22O15209 634 aa15.02■□□□□ -0
PTK2-227ENST00000521029 SMARCA2P51531 1590 aa15.01□□□□□ -0.01
PTK2-227ENST00000521029 KIF21AQ7Z4S6 1674 aa14.97□□□□□ -0.01
PTK2-227ENST00000521029 BAZ1BQ9UIG0 1483 aaKnown RBP14.94□□□□□ -0.02
PTK2-227ENST00000521029 RNF216Q9NWF9 866 aaPredicted RBP14.93□□□□□ -0.02
PTK2-227ENST00000521029 TRIM41Q8WV44 630 aa14.92□□□□□ -0.02
PTK2-227ENST00000521029 LAMC3Q9Y6N6 1575 aa14.9□□□□□ -0.02
PTK2-227ENST00000521029 FOXD4L1Q9NU39 408 aa14.89□□□□□ -0.03
PTK2-227ENST00000521029 PEG3Q9GZU2 1588 aa14.88□□□□□ -0.03
PTK2-227ENST00000521029 BAZ1AQ9NRL2 1556 aaPredicted RBP14.87□□□□□ -0.03
PTK2-227ENST00000521029 MROH2BQ7Z745 1585 aa14.83□□□□□ -0.04
PTK2-227ENST00000521029 PDS5BQ9NTI5 1447 aa14.77□□□□□ -0.04
PTK2-227ENST00000521029 WDR62O43379 1518 aa14.72□□□□□ -0.05
PTK2-227ENST00000521029 MRC2Q9UBG0 1479 aa14.72□□□□□ -0.05
PTK2-227ENST00000521029 DMRT2Q9Y5R5 561 aa14.72□□□□□ -0.05
PTK2-227ENST00000521029 CADPSQ9ULU8 1353 aa14.71□□□□□ -0.06
PTK2-227ENST00000521029 HOXD11P31277 338 aaPredicted RBP14.67□□□□□ -0.06
PTK2-227ENST00000521029 WIZO95785 1651 aa14.67□□□□□ -0.06
PTK2-227ENST00000521029 CEP164Q9UPV0 1460 aa14.58□□□□□ -0.08
PTK2-227ENST00000521029 FANCD2Q9BXW9 1451 aa14.57□□□□□ -0.08
PTK2-227ENST00000521029 OSCARQ8IYS5 282 aa14.56□□□□□ -0.08
PTK2-227ENST00000521029 URB2Q14146 1524 aaKnown RBP14.52□□□□□ -0.08
PTK2-227ENST00000521029 RIMBP3CA6NJZ7 1639 aa14.52□□□□□ -0.09
PTK2-227ENST00000521029 RIMBP3BA6NNM3 1639 aa14.52□□□□□ -0.09
PTK2-227ENST00000521029 RIMBP3Q9UFD9 1639 aa14.52□□□□□ -0.09
PTK2-227ENST00000521029 CFTRP13569 1480 aa14.49□□□□□ -0.09
PTK2-227ENST00000521029 SLC4A2P04920 1241 aa14.46□□□□□ -0.09
PTK2-227ENST00000521029 ZNF608Q9ULD9 1512 aaPredicted RBP14.41□□□□□ -0.1
PTK2-227ENST00000521029 ARHGEF11O15085 1522 aa14.39□□□□□ -0.11
PTK2-227ENST00000521029 PRDM2Q13029 1718 aa14.38□□□□□ -0.11
PTK2-227ENST00000521029 RSF1Q96T23 1441 aaPredicted RBP14.37□□□□□ -0.11
PTK2-227ENST00000521029 TOP2AP11388 1531 aaKnown RBP14.36□□□□□ -0.11
PTK2-227ENST00000521029 MYCNP04198 464 aaPredicted RBP14.36□□□□□ -0.11
PTK2-227ENST00000521029 ATXN8OSP0DMR3 200 aa14.34□□□□□ -0.11
PTK2-227ENST00000521029 IFT140Q96RY7 1462 aa14.3□□□□□ -0.12
PTK2-227ENST00000521029 CHD1O14646 1710 aa14.29□□□□□ -0.12
PTK2-227ENST00000521029 CYB5RLQ6IPT4 315 aa14.29□□□□□ -0.12
PTK2-227ENST00000521029 EIF4G3O43432 1585 aaKnown RBP14.29□□□□□ -0.12
PTK2-227ENST00000521029 TOPBP1Q92547 1522 aa14.27□□□□□ -0.12
PTK2-227ENST00000521029 CCDC88BA6NC98 1476 aa14.25□□□□□ -0.13
PTK2-227ENST00000521029 ARAP1Q96P48 1450 aa14.24□□□□□ -0.13
PTK2-227ENST00000521029 AQRO60306 1485 aaKnown RBP eCLIP14.22□□□□□ -0.134e-7■■□□□ 11.5
PTK2-227ENST00000521029 TARBP1Q13395 1621 aaKnown RBP14.22□□□□□ -0.13
PTK2-227ENST00000521029 TRHP20396 242 aaPredicted RBP14.2□□□□□ -0.14
PTK2-227ENST00000521029 DNMBPQ6XZF7 1577 aa14.17□□□□□ -0.14
PTK2-227ENST00000521029 FBLN2P98095 1184 aa14.13□□□□□ -0.15
PTK2-227ENST00000521029 ABCC8Q09428 1581 aa14.12□□□□□ -0.15
PTK2-227ENST00000521029 DCAF8L1A6NGE4 600 aa14.11□□□□□ -0.15
PTK2-227ENST00000521029 POLA1P09884 1462 aaPredicted RBP14.11□□□□□ -0.15
PTK2-227ENST00000521029 RAD54L2Q9Y4B4 1467 aa14.11□□□□□ -0.15
PTK2-227ENST00000521029 CLASP1Q7Z460 1538 aa14.07□□□□□ -0.16
PTK2-227ENST00000521029 TDRD9Q8NDG6 1382 aaKnown RBP14.07□□□□□ -0.16
PTK2-227ENST00000521029 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.05□□□□□ -0.162e-7■■■■□ 25.2
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms