RNA–Protein interactions for RNA: ENST00000521005.1

VPS37A-208, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 3 BASIC

Gene VPS37A, Length 479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-208ENST00000521005 NISCHQ9Y2I1 1504 aa18.94■□□□□ 0.62
VPS37A-208ENST00000521005 ABCC9O60706 1549 aa17.34■□□□□ 0.37
VPS37A-208ENST00000521005 CCDC180Q9P1Z9 1646 aa17.13■□□□□ 0.33
VPS37A-208ENST00000521005 AEBP2Q6ZN18 517 aaPredicted RBP16.83■□□□□ 0.28
VPS37A-208ENST00000521005 DNAJC5BQ9UF47 199 aa16.56■□□□□ 0.24
VPS37A-208ENST00000521005 CHIC1Q5VXU3 224 aa16.55■□□□□ 0.24
VPS37A-208ENST00000521005 RB1CC1Q8TDY2 1594 aa16.37■□□□□ 0.21
VPS37A-208ENST00000521005 NACADO15069 1562 aa16.21■□□□□ 0.18
VPS37A-208ENST00000521005 UNC13AQ9UPW8 1703 aa16.19■□□□□ 0.18
VPS37A-208ENST00000521005 PABPN1Q86U42 306 aaKnown RBP eCLIP16.09■□□□□ 0.17
VPS37A-208ENST00000521005 BICRAQ9NZM4 1560 aa16.01■□□□□ 0.15
VPS37A-208ENST00000521005 DCAF8L2P0C7V8 631 aa16■□□□□ 0.15
VPS37A-208ENST00000521005 MYO15BQ96JP2 1530 aa15.89■□□□□ 0.13
VPS37A-208ENST00000521005 CC2D2AQ9P2K1 1620 aa15.69■□□□□ 0.1
VPS37A-208ENST00000521005 ZCCHC6Q5VYS8 1495 aaKnown RBP15.65■□□□□ 0.1
VPS37A-208ENST00000521005 CECR2Q9BXF3 1484 aa15.62■□□□□ 0.09
VPS37A-208ENST00000521005 SHROOM4Q9ULL8 1493 aa15.62■□□□□ 0.09
VPS37A-208ENST00000521005 DCAF1Q9Y4B6 1507 aa15.61■□□□□ 0.09
VPS37A-208ENST00000521005 SCRIBQ14160 1630 aa15.58■□□□□ 0.09
VPS37A-208ENST00000521005 EIF4G1Q04637 1599 aaKnown RBP15.58■□□□□ 0.08
VPS37A-208ENST00000521005 DNAJC5Q9H3Z4 198 aa15.3■□□□□ 0.04
VPS37A-208ENST00000521005 CUX2O14529 1486 aa15.01□□□□□ -0.01
VPS37A-208ENST00000521005 NCAPD3P42695 1498 aa14.96□□□□□ -0.01
VPS37A-208ENST00000521005 ERCC6Q03468 1493 aa14.91□□□□□ -0.02
VPS37A-208ENST00000521005 ATAD2BQ9ULI0 1458 aa14.89□□□□□ -0.03
VPS37A-208ENST00000521005 NESP48681 1621 aa14.87□□□□□ -0.03
VPS37A-208ENST00000521005 SMARCA4P51532 1647 aa14.85□□□□□ -0.03
VPS37A-208ENST00000521005 HMGXB3Q12766 1538 aa14.83□□□□□ -0.04
VPS37A-208ENST00000521005 SMARCA2P51531 1590 aa14.81□□□□□ -0.04
VPS37A-208ENST00000521005 THOC2Q8NI27 1593 aaKnown RBP14.78□□□□□ -0.04
VPS37A-208ENST00000521005 KIF21AQ7Z4S6 1674 aa14.71□□□□□ -0.05
VPS37A-208ENST00000521005 PEG3Q9GZU2 1588 aa14.7□□□□□ -0.06
VPS37A-208ENST00000521005 BAZ1BQ9UIG0 1483 aaKnown RBP14.69□□□□□ -0.06
VPS37A-208ENST00000521005 BAZ1AQ9NRL2 1556 aaPredicted RBP14.68□□□□□ -0.06
VPS37A-208ENST00000521005 LAMC3Q9Y6N6 1575 aa14.68□□□□□ -0.06
VPS37A-208ENST00000521005 MROH2BQ7Z745 1585 aa14.63□□□□□ -0.07
VPS37A-208ENST00000521005 PDS5BQ9NTI5 1447 aa14.53□□□□□ -0.08
VPS37A-208ENST00000521005 PHF23Q9BUL5 403 aaPredicted RBP14.51□□□□□ -0.09
VPS37A-208ENST00000521005 TRIM41Q8WV44 630 aa14.49□□□□□ -0.09
VPS37A-208ENST00000521005 CADPSQ9ULU8 1353 aa14.47□□□□□ -0.09
VPS37A-208ENST00000521005 WDR62O43379 1518 aa14.47□□□□□ -0.09
VPS37A-208ENST00000521005 WIZO95785 1651 aa14.47□□□□□ -0.09
VPS37A-208ENST00000521005 MRC2Q9UBG0 1479 aa14.46□□□□□ -0.09
VPS37A-208ENST00000521005 CEP164Q9UPV0 1460 aa14.35□□□□□ -0.11
VPS37A-208ENST00000521005 SENP3Q9H4L4 574 aaPredicted RBP14.34□□□□□ -0.11
VPS37A-208ENST00000521005 FANCD2Q9BXW9 1451 aa14.32□□□□□ -0.12
VPS37A-208ENST00000521005 CFTRP13569 1480 aa14.28□□□□□ -0.12
VPS37A-208ENST00000521005 URB2Q14146 1524 aaKnown RBP14.27□□□□□ -0.12
VPS37A-208ENST00000521005 OSCARQ8IYS5 282 aa14.25□□□□□ -0.13
VPS37A-208ENST00000521005 PRDM2Q13029 1718 aa14.22□□□□□ -0.13
VPS37A-208ENST00000521005 RIMBP3CA6NJZ7 1639 aa14.21□□□□□ -0.13
VPS37A-208ENST00000521005 RIMBP3BA6NNM3 1639 aa14.21□□□□□ -0.13
VPS37A-208ENST00000521005 RIMBP3Q9UFD9 1639 aa14.21□□□□□ -0.13
VPS37A-208ENST00000521005 TOP2AP11388 1531 aaKnown RBP14.2□□□□□ -0.14
VPS37A-208ENST00000521005 RSF1Q96T23 1441 aaPredicted RBP14.19□□□□□ -0.14
VPS37A-208ENST00000521005 ZNF608Q9ULD9 1512 aaPredicted RBP14.14□□□□□ -0.15
VPS37A-208ENST00000521005 ARHGEF11O15085 1522 aa14.09□□□□□ -0.15
VPS37A-208ENST00000521005 IFT140Q96RY7 1462 aa14.06□□□□□ -0.16
VPS37A-208ENST00000521005 TOPBP1Q92547 1522 aa14.05□□□□□ -0.16
VPS37A-208ENST00000521005 CCDC88BA6NC98 1476 aa14.05□□□□□ -0.16
VPS37A-208ENST00000521005 EIF4G3O43432 1585 aaKnown RBP14.05□□□□□ -0.16
VPS37A-208ENST00000521005 CHD1O14646 1710 aa14.04□□□□□ -0.16
VPS37A-208ENST00000521005 TARBP1Q13395 1621 aaKnown RBP13.99□□□□□ -0.17
VPS37A-208ENST00000521005 DNMBPQ6XZF7 1577 aa13.97□□□□□ -0.17
VPS37A-208ENST00000521005 CYB5RLQ6IPT4 315 aa13.96□□□□□ -0.17
VPS37A-208ENST00000521005 AQRO60306 1485 aaKnown RBP eCLIP13.95□□□□□ -0.18
VPS37A-208ENST00000521005 ARAP1Q96P48 1450 aa13.95□□□□□ -0.18
VPS37A-208ENST00000521005 ABCC8Q09428 1581 aa13.93□□□□□ -0.18
VPS37A-208ENST00000521005 POLA1P09884 1462 aaPredicted RBP13.89□□□□□ -0.19
VPS37A-208ENST00000521005 RAD54L2Q9Y4B4 1467 aa13.87□□□□□ -0.19
VPS37A-208ENST00000521005 TRHP20396 242 aaPredicted RBP13.84□□□□□ -0.19
VPS37A-208ENST00000521005 FBLN2P98095 1184 aa13.83□□□□□ -0.2
VPS37A-208ENST00000521005 CLASP1Q7Z460 1538 aa13.83□□□□□ -0.2
VPS37A-208ENST00000521005 TDRD9Q8NDG6 1382 aaKnown RBP13.81□□□□□ -0.2
VPS37A-208ENST00000521005 SNAPC4Q5SXM2 1469 aa13.8□□□□□ -0.2
VPS37A-208ENST00000521005 SOGA1O94964 1423 aa13.79□□□□□ -0.2
VPS37A-208ENST00000521005 WDR97A6NE52 1622 aa13.76□□□□□ -0.21
VPS37A-208ENST00000521005 FGD5Q6ZNL6 1462 aa13.76□□□□□ -0.21
VPS37A-208ENST00000521005 CUX1P39880 1505 aa13.74□□□□□ -0.21
VPS37A-208ENST00000521005 SYNJ1O43426 1573 aa13.74□□□□□ -0.21
VPS37A-208ENST00000521005 PBRM1Q86U86 1689 aa13.72□□□□□ -0.21
VPS37A-208ENST00000521005 MAGI1Q96QZ7 1491 aaPredicted RBP13.71□□□□□ -0.21
VPS37A-208ENST00000521005 SYNJ2O15056 1496 aa13.68□□□□□ -0.22
VPS37A-208ENST00000521005 GRIN2BQ13224 1484 aa13.68□□□□□ -0.22
VPS37A-208ENST00000521005 CHMP7Q8WUX9 453 aaPredicted RBP13.68□□□□□ -0.22
VPS37A-208ENST00000521005 ERCC6L2Q5T890 1561 aa13.64□□□□□ -0.23
VPS37A-208ENST00000521005 ABCA5Q8WWZ7 1642 aa13.64□□□□□ -0.23
VPS37A-208ENST00000521005 GAPVD1Q14C86 1478 aa13.63□□□□□ -0.23
VPS37A-208ENST00000521005 ABCA10Q8WWZ4 1543 aa13.58□□□□□ -0.24
VPS37A-208ENST00000521005 CEP170Q5SW79 1584 aa13.56□□□□□ -0.24
VPS37A-208ENST00000521005 KIF13AQ9H1H9 1805 aa13.55□□□□□ -0.24
VPS37A-208ENST00000521005 SHROOM2Q13796 1616 aa13.53□□□□□ -0.24
VPS37A-208ENST00000521005 GRIN2AQ12879 1464 aa13.53□□□□□ -0.24
VPS37A-208ENST00000521005 ADAMTS12P58397 1594 aa13.53□□□□□ -0.24
VPS37A-208ENST00000521005 NUP160Q12769 1436 aa13.51□□□□□ -0.25
VPS37A-208ENST00000521005 BIVM-ERCC5R4GMW8 1640 aa13.48□□□□□ -0.25
VPS37A-208ENST00000521005 PLPPR3Q6T4P5 718 aa13.47□□□□□ -0.25
VPS37A-208ENST00000521005 TOP2BQ02880 1626 aa13.44□□□□□ -0.26
VPS37A-208ENST00000521005 FHAD1B1AJZ9 1412 aa13.42□□□□□ -0.26
VPS37A-208ENST00000521005 WRNQ14191 1432 aaPredicted RBP eCLIP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms