RNA–Protein interactions for RNA: ENST00000520895.5

HDAC2-209, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-209ENST00000520895 NISCHQ9Y2I1 1504 aa37.19■■■■□ 3.54
HDAC2-209ENST00000520895 CCDC180Q9P1Z9 1646 aa33.05■■■□□ 2.88
HDAC2-209ENST00000520895 ABCC9O60706 1549 aa32.28■■■□□ 2.76
HDAC2-209ENST00000520895 DCAF8L2P0C7V8 631 aa31.12■■■□□ 2.57
HDAC2-209ENST00000520895 RB1CC1Q8TDY2 1594 aa31.06■■■□□ 2.56
HDAC2-209ENST00000520895 NACADO15069 1562 aa31.04■■■□□ 2.56
HDAC2-209ENST00000520895 ZCCHC6Q5VYS8 1495 aaKnown RBP30.99■■■□□ 2.55
HDAC2-209ENST00000520895 MYO15BQ96JP2 1530 aa30.88■■■□□ 2.53
HDAC2-209ENST00000520895 DCAF1Q9Y4B6 1507 aa30.76■■■□□ 2.51
HDAC2-209ENST00000520895 UNC13AQ9UPW8 1703 aa30.48■■■□□ 2.47
HDAC2-209ENST00000520895 BICRAQ9NZM4 1560 aa30.22■■■□□ 2.43
HDAC2-209ENST00000520895 SCRIBQ14160 1630 aa30.18■■■□□ 2.42
HDAC2-209ENST00000520895 PABPN1Q86U42 306 aaKnown RBP eCLIP30.13■■■□□ 2.41
HDAC2-209ENST00000520895 SHROOM4Q9ULL8 1493 aa29.87■■■□□ 2.37
HDAC2-209ENST00000520895 DNAJC5BQ9UF47 199 aa29.79■■■□□ 2.36
HDAC2-209ENST00000520895 EIF4G1Q04637 1599 aaKnown RBP29.37■■■□□ 2.29
HDAC2-209ENST00000520895 CC2D2AQ9P2K1 1620 aa29.27■■■□□ 2.28
HDAC2-209ENST00000520895 CECR2Q9BXF3 1484 aa29.03■■■□□ 2.24
HDAC2-209ENST00000520895 SMARCA4P51532 1647 aa28.85■■■□□ 2.21
HDAC2-209ENST00000520895 BAZ1AQ9NRL2 1556 aaPredicted RBP28.84■■■□□ 2.21
HDAC2-209ENST00000520895 MROH2BQ7Z745 1585 aa28.67■■■□□ 2.18
HDAC2-209ENST00000520895 NCAPD3P42695 1498 aa28.65■■■□□ 2.18
HDAC2-209ENST00000520895 SMARCA2P51531 1590 aa28.64■■■□□ 2.18
HDAC2-209ENST00000520895 ATAD2BQ9ULI0 1458 aa28.64■■■□□ 2.17
HDAC2-209ENST00000520895 PEG3Q9GZU2 1588 aa28.56■■■□□ 2.16
HDAC2-209ENST00000520895 HMGXB3Q12766 1538 aa28.51■■■□□ 2.15
HDAC2-209ENST00000520895 BAZ1BQ9UIG0 1483 aaKnown RBP28.44■■■□□ 2.14
HDAC2-209ENST00000520895 WIZO95785 1651 aa28.39■■■□□ 2.14
HDAC2-209ENST00000520895 RSF1Q96T23 1441 aaPredicted RBP28.36■■■□□ 2.13
HDAC2-209ENST00000520895 TOP2AP11388 1531 aaKnown RBP28.08■■■□□ 2.09
HDAC2-209ENST00000520895 NESP48681 1621 aa27.96■■■□□ 2.07
HDAC2-209ENST00000520895 LAMC3Q9Y6N6 1575 aa27.9■■■□□ 2.06
HDAC2-209ENST00000520895 SUPT5HO00267 1087 aaKnown RBP27.81■■■□□ 2.04
HDAC2-209ENST00000520895 ERCC6Q03468 1493 aa27.8■■■□□ 2.04
HDAC2-209ENST00000520895 CADPSQ9ULU8 1353 aa27.79■■■□□ 2.04
HDAC2-209ENST00000520895 CCDC88BA6NC98 1476 aa27.74■■■□□ 2.03
HDAC2-209ENST00000520895 PDS5BQ9NTI5 1447 aa27.67■■■□□ 2.02
HDAC2-209ENST00000520895 KIF21AQ7Z4S6 1674 aa27.66■■■□□ 2.02
HDAC2-209ENST00000520895 CFTRP13569 1480 aa27.64■■■□□ 2.01
HDAC2-209ENST00000520895 CUX2O14529 1486 aa27.63■■■□□ 2.01
HDAC2-209ENST00000520895 THOC2Q8NI27 1593 aaKnown RBP27.61■■■□□ 2.01
HDAC2-209ENST00000520895 PRDM2Q13029 1718 aa27.52■■■□□ 2
HDAC2-209ENST00000520895 FANCD2Q9BXW9 1451 aa27.49■■□□□ 1.99
HDAC2-209ENST00000520895 CEP164Q9UPV0 1460 aa27.45■■□□□ 1.99
HDAC2-209ENST00000520895 MRC2Q9UBG0 1479 aa27.39■■□□□ 1.98
HDAC2-209ENST00000520895 WDR62O43379 1518 aa27.36■■□□□ 1.97
HDAC2-209ENST00000520895 URB2Q14146 1524 aaKnown RBP27.21■■□□□ 1.95
HDAC2-209ENST00000520895 ABCC8Q09428 1581 aa27.08■■□□□ 1.93
HDAC2-209ENST00000520895 TOPBP1Q92547 1522 aa27.06■■□□□ 1.92
HDAC2-209ENST00000520895 DNMBPQ6XZF7 1577 aa27.05■■□□□ 1.92
HDAC2-209ENST00000520895 CUX1P39880 1505 aa26.88■■□□□ 1.89
HDAC2-209ENST00000520895 DNAJC5Q9H3Z4 198 aa26.87■■□□□ 1.89
HDAC2-209ENST00000520895 IFT140Q96RY7 1462 aa26.87■■□□□ 1.89
HDAC2-209ENST00000520895 POLA1P09884 1462 aaPredicted RBP26.83■■□□□ 1.89
HDAC2-209ENST00000520895 FGD5Q6ZNL6 1462 aa26.79■■□□□ 1.88
HDAC2-209ENST00000520895 TARBP1Q13395 1621 aaKnown RBP26.79■■□□□ 1.88
HDAC2-209ENST00000520895 WRNQ14191 1432 aaPredicted RBP eCLIP26.77■■□□□ 1.88
HDAC2-209ENST00000520895 ZNF608Q9ULD9 1512 aaPredicted RBP26.75■■□□□ 1.87
HDAC2-209ENST00000520895 SOGA1O94964 1423 aa26.73■■□□□ 1.87
HDAC2-209ENST00000520895 RAD54L2Q9Y4B4 1467 aa26.71■■□□□ 1.87
HDAC2-209ENST00000520895 TOP2BQ02880 1626 aa26.7■■□□□ 1.86
HDAC2-209ENST00000520895 BIVM-ERCC5R4GMW8 1640 aa26.7■■□□□ 1.86
HDAC2-209ENST00000520895 SYNJ1O43426 1573 aa26.7■■□□□ 1.86
HDAC2-209ENST00000520895 EIF4G3O43432 1585 aaKnown RBP26.65■■□□□ 1.86
HDAC2-209ENST00000520895 AQRO60306 1485 aaKnown RBP eCLIP26.59■■□□□ 1.853e-7■■■■■ 30.5
HDAC2-209ENST00000520895 WDR97A6NE52 1622 aa26.57■■□□□ 1.84
HDAC2-209ENST00000520895 TDRD9Q8NDG6 1382 aaKnown RBP26.57■■□□□ 1.84
HDAC2-209ENST00000520895 ABCA10Q8WWZ4 1543 aa26.52■■□□□ 1.84
HDAC2-209ENST00000520895 GAPVD1Q14C86 1478 aa26.42■■□□□ 1.82
HDAC2-209ENST00000520895 ABCA5Q8WWZ7 1642 aa26.42■■□□□ 1.82
HDAC2-209ENST00000520895 GRIN2BQ13224 1484 aa26.41■■□□□ 1.82
HDAC2-209ENST00000520895 PBRM1Q86U86 1689 aa26.41■■□□□ 1.82
HDAC2-209ENST00000520895 OSCARQ8IYS5 282 aa26.38■■□□□ 1.81
HDAC2-209ENST00000520895 SNAPC4Q5SXM2 1469 aa26.36■■□□□ 1.81
HDAC2-209ENST00000520895 CHD1O14646 1710 aa26.35■■□□□ 1.81
HDAC2-209ENST00000520895 MAGI1Q96QZ7 1491 aaPredicted RBP26.32■■□□□ 1.8
HDAC2-209ENST00000520895 FBLN2P98095 1184 aa26.31■■□□□ 1.8
HDAC2-209ENST00000520895 TRIM41Q8WV44 630 aa26.26■■□□□ 1.79
HDAC2-209ENST00000520895 CHMP7Q8WUX9 453 aaPredicted RBP26.24■■□□□ 1.79
HDAC2-209ENST00000520895 ERICH3Q5RHP9 1530 aa26.22■■□□□ 1.79
HDAC2-209ENST00000520895 SYNJ2O15056 1496 aa26.22■■□□□ 1.79
HDAC2-209ENST00000520895 KIF27Q86VH2 1401 aa26.22■■□□□ 1.79
HDAC2-209ENST00000520895 ADAMTS12P58397 1594 aa26.16■■□□□ 1.78
HDAC2-209ENST00000520895 FHAD1B1AJZ9 1412 aa26.12■■□□□ 1.77
HDAC2-209ENST00000520895 CLASP1Q7Z460 1538 aa26.09■■□□□ 1.77
HDAC2-209ENST00000520895 RIMBP3CA6NJZ7 1639 aa26.06■■□□□ 1.76
HDAC2-209ENST00000520895 RIMBP3BA6NNM3 1639 aa26.06■■□□□ 1.76
HDAC2-209ENST00000520895 RIMBP3Q9UFD9 1639 aa26.06■■□□□ 1.76
HDAC2-209ENST00000520895 GRIN2AQ12879 1464 aa26.06■■□□□ 1.76
HDAC2-209ENST00000520895 IGF1RP08069 1367 aa26.06■■□□□ 1.76
HDAC2-209ENST00000520895 CUL7Q14999 1698 aa26.03■■□□□ 1.76
HDAC2-209ENST00000520895 ARHGEF11O15085 1522 aa26.03■■□□□ 1.76
HDAC2-209ENST00000520895 RUSC2Q8N2Y8 1516 aa25.98■■□□□ 1.75
HDAC2-209ENST00000520895 CHIC1Q5VXU3 224 aa25.96■■□□□ 1.75
HDAC2-209ENST00000520895 NUP160Q12769 1436 aa25.94■■□□□ 1.74
HDAC2-209ENST00000520895 CEP170Q5SW79 1584 aa25.93■■□□□ 1.74
HDAC2-209ENST00000520895 CARMIL1Q5VZK9 1371 aa25.93■■□□□ 1.74
HDAC2-209ENST00000520895 ARAP1Q96P48 1450 aa25.83■■□□□ 1.73
HDAC2-209ENST00000520895 SHROOM2Q13796 1616 aa25.8■■□□□ 1.72
HDAC2-209ENST00000520895 RAPGEF2Q9Y4G8 1499 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms