RNA–Protein interactions for RNA: ENST00000520721.1

IGHV3-22-201, Transcript of immunoglobulin heavy variable 3-22 (pseudogene), humanhuman

BASIC

Gene IGHV3-22, Length 359 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-22-201ENST00000520721 NISCHQ9Y2I1 1504 aa43.01■■■■■ 4.48
IGHV3-22-201ENST00000520721 CCDC180Q9P1Z9 1646 aa38.52■■■■□ 3.76
IGHV3-22-201ENST00000520721 ABCC9O60706 1549 aa38.03■■■■□ 3.68
IGHV3-22-201ENST00000520721 RB1CC1Q8TDY2 1594 aa36.42■■■■□ 3.42
IGHV3-22-201ENST00000520721 NACADO15069 1562 aa36.27■■■■□ 3.4
IGHV3-22-201ENST00000520721 DCAF8L2P0C7V8 631 aa35.95■■■■□ 3.35
IGHV3-22-201ENST00000520721 MYO15BQ96JP2 1530 aa35.93■■■■□ 3.34
IGHV3-22-201ENST00000520721 UNC13AQ9UPW8 1703 aa35.75■■■■□ 3.31
IGHV3-22-201ENST00000520721 DNAJC5BQ9UF47 199 aa35.74■■■■□ 3.31
IGHV3-22-201ENST00000520721 ZCCHC6Q5VYS8 1495 aaKnown RBP35.73■■■■□ 3.31
IGHV3-22-201ENST00000520721 DCAF1Q9Y4B6 1507 aa35.59■■■■□ 3.29
IGHV3-22-201ENST00000520721 PABPN1Q86U42 306 aaKnown RBP eCLIP35.42■■■■□ 3.26
IGHV3-22-201ENST00000520721 BICRAQ9NZM4 1560 aa35.42■■■■□ 3.26
IGHV3-22-201ENST00000520721 SCRIBQ14160 1630 aa35.02■■■■□ 3.2
IGHV3-22-201ENST00000520721 SHROOM4Q9ULL8 1493 aa34.94■■■■□ 3.18
IGHV3-22-201ENST00000520721 EIF4G1Q04637 1599 aaKnown RBP34.46■■■■□ 3.11
IGHV3-22-201ENST00000520721 CC2D2AQ9P2K1 1620 aa34.45■■■■□ 3.11
IGHV3-22-201ENST00000520721 CECR2Q9BXF3 1484 aa34.24■■■■□ 3.07
IGHV3-22-201ENST00000520721 SMARCA4P51532 1647 aa33.5■■■□□ 2.95
IGHV3-22-201ENST00000520721 NCAPD3P42695 1498 aa33.47■■■□□ 2.95
IGHV3-22-201ENST00000520721 ATAD2BQ9ULI0 1458 aa33.4■■■□□ 2.94
IGHV3-22-201ENST00000520721 BAZ1AQ9NRL2 1556 aaPredicted RBP33.35■■■□□ 2.93
IGHV3-22-201ENST00000520721 SMARCA2P51531 1590 aa33.34■■■□□ 2.93
IGHV3-22-201ENST00000520721 HMGXB3Q12766 1538 aa33.28■■■□□ 2.92
IGHV3-22-201ENST00000520721 PEG3Q9GZU2 1588 aa33.21■■■□□ 2.91
IGHV3-22-201ENST00000520721 DNAJC5Q9H3Z4 198 aa33.18■■■□□ 2.9
IGHV3-22-201ENST00000520721 MROH2BQ7Z745 1585 aa33.14■■■□□ 2.9
IGHV3-22-201ENST00000520721 BAZ1BQ9UIG0 1483 aaKnown RBP33.06■■■□□ 2.88
IGHV3-22-201ENST00000520721 NESP48681 1621 aa32.81■■■□□ 2.84
IGHV3-22-201ENST00000520721 WIZO95785 1651 aa32.79■■■□□ 2.84
IGHV3-22-201ENST00000520721 ERCC6Q03468 1493 aa32.77■■■□□ 2.84
IGHV3-22-201ENST00000520721 CUX2O14529 1486 aa32.67■■■□□ 2.82
IGHV3-22-201ENST00000520721 LAMC3Q9Y6N6 1575 aa32.67■■■□□ 2.82
IGHV3-22-201ENST00000520721 RSF1Q96T23 1441 aaPredicted RBP32.56■■■□□ 2.8
IGHV3-22-201ENST00000520721 KIF21AQ7Z4S6 1674 aa32.48■■■□□ 2.79
IGHV3-22-201ENST00000520721 THOC2Q8NI27 1593 aaKnown RBP32.48■■■□□ 2.79
IGHV3-22-201ENST00000520721 CADPSQ9ULU8 1353 aa32.43■■■□□ 2.78
IGHV3-22-201ENST00000520721 PDS5BQ9NTI5 1447 aa32.4■■■□□ 2.78
IGHV3-22-201ENST00000520721 TOP2AP11388 1531 aaKnown RBP32.37■■■□□ 2.77
IGHV3-22-201ENST00000520721 CFTRP13569 1480 aa32.17■■■□□ 2.74
IGHV3-22-201ENST00000520721 MRC2Q9UBG0 1479 aa32.12■■■□□ 2.73
IGHV3-22-201ENST00000520721 WDR62O43379 1518 aa32.08■■■□□ 2.73
IGHV3-22-201ENST00000520721 FANCD2Q9BXW9 1451 aa32.06■■■□□ 2.72
IGHV3-22-201ENST00000520721 CEP164Q9UPV0 1460 aa32.06■■■□□ 2.72
IGHV3-22-201ENST00000520721 PRDM2Q13029 1718 aa32.01■■■□□ 2.72
IGHV3-22-201ENST00000520721 CCDC88BA6NC98 1476 aa31.98■■■□□ 2.71
IGHV3-22-201ENST00000520721 URB2Q14146 1524 aaKnown RBP31.81■■■□□ 2.68
IGHV3-22-201ENST00000520721 TOPBP1Q92547 1522 aa31.52■■■□□ 2.64
IGHV3-22-201ENST00000520721 ABCC8Q09428 1581 aa31.47■■■□□ 2.63
IGHV3-22-201ENST00000520721 DNMBPQ6XZF7 1577 aa31.44■■■□□ 2.62
IGHV3-22-201ENST00000520721 TRIM41Q8WV44 630 aa31.44■■■□□ 2.62
IGHV3-22-201ENST00000520721 IFT140Q96RY7 1462 aa31.4■■■□□ 2.62
IGHV3-22-201ENST00000520721 ZNF608Q9ULD9 1512 aaPredicted RBP31.34■■■□□ 2.61
IGHV3-22-201ENST00000520721 TARBP1Q13395 1621 aaKnown RBP31.28■■■□□ 2.6
IGHV3-22-201ENST00000520721 SUPT5HO00267 1087 aaKnown RBP31.24■■■□□ 2.59
IGHV3-22-201ENST00000520721 EIF4G3O43432 1585 aaKnown RBP31.22■■■□□ 2.59
IGHV3-22-201ENST00000520721 POLA1P09884 1462 aaPredicted RBP31.22■■■□□ 2.59
IGHV3-22-201ENST00000520721 OSCARQ8IYS5 282 aa31.17■■■□□ 2.58
IGHV3-22-201ENST00000520721 CUX1P39880 1505 aa31.12■■■□□ 2.57
IGHV3-22-201ENST00000520721 AQRO60306 1485 aaKnown RBP eCLIP31.08■■■□□ 2.57
IGHV3-22-201ENST00000520721 RAD54L2Q9Y4B4 1467 aa31.07■■■□□ 2.56
IGHV3-22-201ENST00000520721 FGD5Q6ZNL6 1462 aa31.06■■■□□ 2.56
IGHV3-22-201ENST00000520721 SOGA1O94964 1423 aa31.04■■■□□ 2.56
IGHV3-22-201ENST00000520721 WDR97A6NE52 1622 aa30.98■■■□□ 2.55
IGHV3-22-201ENST00000520721 CHD1O14646 1710 aa30.97■■■□□ 2.55
IGHV3-22-201ENST00000520721 TDRD9Q8NDG6 1382 aaKnown RBP30.92■■■□□ 2.54
IGHV3-22-201ENST00000520721 RIMBP3CA6NJZ7 1639 aa30.84■■■□□ 2.53
IGHV3-22-201ENST00000520721 RIMBP3BA6NNM3 1639 aa30.84■■■□□ 2.53
IGHV3-22-201ENST00000520721 RIMBP3Q9UFD9 1639 aa30.84■■■□□ 2.53
IGHV3-22-201ENST00000520721 SNAPC4Q5SXM2 1469 aa30.77■■■□□ 2.52
IGHV3-22-201ENST00000520721 BIVM-ERCC5R4GMW8 1640 aa30.76■■■□□ 2.52
IGHV3-22-201ENST00000520721 GRIN2BQ13224 1484 aa30.75■■■□□ 2.51
IGHV3-22-201ENST00000520721 PBRM1Q86U86 1689 aa30.74■■■□□ 2.51
IGHV3-22-201ENST00000520721 ARHGEF11O15085 1522 aa30.74■■■□□ 2.51
IGHV3-22-201ENST00000520721 ABCA10Q8WWZ4 1543 aa30.74■■■□□ 2.51
IGHV3-22-201ENST00000520721 TOP2BQ02880 1626 aa30.73■■■□□ 2.51
IGHV3-22-201ENST00000520721 MAGI1Q96QZ7 1491 aaPredicted RBP30.73■■■□□ 2.51
IGHV3-22-201ENST00000520721 ABCA5Q8WWZ7 1642 aa30.73■■■□□ 2.51
IGHV3-22-201ENST00000520721 SYNJ1O43426 1573 aa30.7■■■□□ 2.5
IGHV3-22-201ENST00000520721 FBLN2P98095 1184 aa30.69■■■□□ 2.5
IGHV3-22-201ENST00000520721 GAPVD1Q14C86 1478 aa30.69■■■□□ 2.5
IGHV3-22-201ENST00000520721 WRNQ14191 1432 aaPredicted RBP eCLIP30.67■■■□□ 2.5
IGHV3-22-201ENST00000520721 SYNJ2O15056 1496 aa30.62■■■□□ 2.49
IGHV3-22-201ENST00000520721 CLASP1Q7Z460 1538 aa30.59■■■□□ 2.49
IGHV3-22-201ENST00000520721 CHMP7Q8WUX9 453 aaPredicted RBP30.56■■■□□ 2.48
IGHV3-22-201ENST00000520721 ARAP1Q96P48 1450 aa30.46■■■□□ 2.47
IGHV3-22-201ENST00000520721 ADAMTS12P58397 1594 aa30.42■■■□□ 2.46
IGHV3-22-201ENST00000520721 CYB5RLQ6IPT4 315 aa30.4■■■□□ 2.46
IGHV3-22-201ENST00000520721 ERICH3Q5RHP9 1530 aa30.37■■■□□ 2.45
IGHV3-22-201ENST00000520721 GRIN2AQ12879 1464 aa30.37■■■□□ 2.45
IGHV3-22-201ENST00000520721 FHAD1B1AJZ9 1412 aa30.3■■■□□ 2.44
IGHV3-22-201ENST00000520721 CEP170Q5SW79 1584 aa30.28■■■□□ 2.44
IGHV3-22-201ENST00000520721 NUP160Q12769 1436 aa30.27■■■□□ 2.44
IGHV3-22-201ENST00000520721 SHROOM2Q13796 1616 aa30.17■■■□□ 2.42
IGHV3-22-201ENST00000520721 ERCC6L2Q5T890 1561 aa30.13■■■□□ 2.41
IGHV3-22-201ENST00000520721 KIF27Q86VH2 1401 aa30.05■■■□□ 2.4
IGHV3-22-201ENST00000520721 TRHP20396 242 aaPredicted RBP30.04■■■□□ 2.4
IGHV3-22-201ENST00000520721 IGF1RP08069 1367 aa30.03■■■□□ 2.4
IGHV3-22-201ENST00000520721 CUL7Q14999 1698 aa30.02■■■□□ 2.4
IGHV3-22-201ENST00000520721 RUSC2Q8N2Y8 1516 aa30.01■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms