RNA–Protein interactions for RNA: ENST00000520717.1

SNTB1-205, Transcript of syntrophin beta 1, humanhuman

TSL 2

Gene SNTB1, Length 559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNTB1-205ENST00000520717 NISCHQ9Y2I1 1504 aa72.45■■■■■ 9.19
SNTB1-205ENST00000520717 CCDC180Q9P1Z9 1646 aa64.79■■■■■ 7.96
SNTB1-205ENST00000520717 ABCC9O60706 1549 aa64.11■■■■■ 7.85
SNTB1-205ENST00000520717 RB1CC1Q8TDY2 1594 aa61.35■■■■■ 7.41
SNTB1-205ENST00000520717 NACADO15069 1562 aa61.09■■■■■ 7.37
SNTB1-205ENST00000520717 DCAF8L2P0C7V8 631 aa60.79■■■■■ 7.32
SNTB1-205ENST00000520717 MYO15BQ96JP2 1530 aa60.48■■■■■ 7.27
SNTB1-205ENST00000520717 ZCCHC6Q5VYS8 1495 aaKnown RBP60.21■■■■■ 7.23
SNTB1-205ENST00000520717 DCAF1Q9Y4B6 1507 aa59.93■■■■■ 7.18
SNTB1-205ENST00000520717 UNC13AQ9UPW8 1703 aa59.91■■■■■ 7.18
SNTB1-205ENST00000520717 PABPN1Q86U42 306 aaKnown RBP eCLIP59.74■■■■■ 7.15
SNTB1-205ENST00000520717 DNAJC5BQ9UF47 199 aa59.51■■■■■ 7.12
SNTB1-205ENST00000520717 BICRAQ9NZM4 1560 aa59.51■■■■■ 7.12
SNTB1-205ENST00000520717 SCRIBQ14160 1630 aa59.03■■■■■ 7.04
SNTB1-205ENST00000520717 SHROOM4Q9ULL8 1493 aa58.87■■■■■ 7.02
SNTB1-205ENST00000520717 EIF4G1Q04637 1599 aaKnown RBP58.02■■■■■ 6.88
SNTB1-205ENST00000520717 CC2D2AQ9P2K1 1620 aa57.97■■■■■ 6.87
SNTB1-205ENST00000520717 CECR2Q9BXF3 1484 aa57.71■■■■■ 6.83
SNTB1-205ENST00000520717 SMARCA4P51532 1647 aa56.41■■■■■ 6.62
SNTB1-205ENST00000520717 NCAPD3P42695 1498 aa56.37■■■■■ 6.61
SNTB1-205ENST00000520717 ATAD2BQ9ULI0 1458 aa56.28■■■■■ 6.6
SNTB1-205ENST00000520717 BAZ1AQ9NRL2 1556 aaPredicted RBP56.23■■■■■ 6.59
SNTB1-205ENST00000520717 SMARCA2P51531 1590 aa56.2■■■■■ 6.59
SNTB1-205ENST00000520717 HMGXB3Q12766 1538 aa56.05■■■■■ 6.56
SNTB1-205ENST00000520717 PEG3Q9GZU2 1588 aa55.87■■■■■ 6.53
SNTB1-205ENST00000520717 MROH2BQ7Z745 1585 aa55.82■■■■■ 6.53
SNTB1-205ENST00000520717 BAZ1BQ9UIG0 1483 aaKnown RBP55.8■■■■■ 6.52
SNTB1-205ENST00000520717 ERCC6Q03468 1493 aa55.35■■■■■ 6.45
SNTB1-205ENST00000520717 NESP48681 1621 aa55.24■■■■■ 6.43
SNTB1-205ENST00000520717 WIZO95785 1651 aa55.17■■■■■ 6.42
SNTB1-205ENST00000520717 CUX2O14529 1486 aa55.05■■■■■ 6.4
SNTB1-205ENST00000520717 LAMC3Q9Y6N6 1575 aa55.02■■■■■ 6.4
SNTB1-205ENST00000520717 RSF1Q96T23 1441 aaPredicted RBP54.89■■■■■ 6.38
SNTB1-205ENST00000520717 CADPSQ9ULU8 1353 aa54.68■■■■■ 6.34
SNTB1-205ENST00000520717 PDS5BQ9NTI5 1447 aa54.67■■■■■ 6.34
SNTB1-205ENST00000520717 THOC2Q8NI27 1593 aaKnown RBP54.61■■■■■ 6.33
SNTB1-205ENST00000520717 TOP2AP11388 1531 aaKnown RBP54.58■■■■■ 6.33
SNTB1-205ENST00000520717 KIF21AQ7Z4S6 1674 aa54.58■■■■■ 6.33
SNTB1-205ENST00000520717 DNAJC5Q9H3Z4 198 aa54.23■■■■■ 6.27
SNTB1-205ENST00000520717 CFTRP13569 1480 aa54.2■■■■■ 6.27
SNTB1-205ENST00000520717 MRC2Q9UBG0 1479 aa54.17■■■■■ 6.26
SNTB1-205ENST00000520717 CEP164Q9UPV0 1460 aa54.09■■■■■ 6.25
SNTB1-205ENST00000520717 FANCD2Q9BXW9 1451 aa54.07■■■■■ 6.25
SNTB1-205ENST00000520717 WDR62O43379 1518 aa54.03■■■■■ 6.24
SNTB1-205ENST00000520717 CCDC88BA6NC98 1476 aa53.9■■■■■ 6.22
SNTB1-205ENST00000520717 PRDM2Q13029 1718 aa53.73■■■■■ 6.19
SNTB1-205ENST00000520717 URB2Q14146 1524 aaKnown RBP53.58■■■■■ 6.17
SNTB1-205ENST00000520717 TOPBP1Q92547 1522 aa53.12■■■■■ 6.09
SNTB1-205ENST00000520717 ABCC8Q09428 1581 aa53.06■■■■■ 6.09
SNTB1-205ENST00000520717 DNMBPQ6XZF7 1577 aa53■■■■■ 6.07
SNTB1-205ENST00000520717 IFT140Q96RY7 1462 aa52.98■■■■■ 6.07
SNTB1-205ENST00000520717 SUPT5HO00267 1087 aaKnown RBP52.88■■■■■ 6.06
SNTB1-205ENST00000520717 ZNF608Q9ULD9 1512 aaPredicted RBP52.8■■■■■ 6.04
SNTB1-205ENST00000520717 POLA1P09884 1462 aaPredicted RBP52.62■■■■■ 6.01
SNTB1-205ENST00000520717 TARBP1Q13395 1621 aaKnown RBP52.59■■■■■ 6.01
SNTB1-205ENST00000520717 OSCARQ8IYS5 282 aa52.58■■■■■ 6.01
SNTB1-205ENST00000520717 EIF4G3O43432 1585 aaKnown RBP52.58■■■■■ 6.01
SNTB1-205ENST00000520717 CUX1P39880 1505 aa52.42■■■■■ 5.98
SNTB1-205ENST00000520717 AQRO60306 1485 aaKnown RBP eCLIP52.38■■■■■ 5.981e-9■■■■■ 63.8
SNTB1-205ENST00000520717 FGD5Q6ZNL6 1462 aa52.37■■■■■ 5.97
SNTB1-205ENST00000520717 RAD54L2Q9Y4B4 1467 aa52.37■■■■■ 5.97
SNTB1-205ENST00000520717 SOGA1O94964 1423 aa52.37■■■■■ 5.97
SNTB1-205ENST00000520717 TDRD9Q8NDG6 1382 aaKnown RBP52.17■■■■■ 5.94
SNTB1-205ENST00000520717 WDR97A6NE52 1622 aa52.16■■■■■ 5.94
SNTB1-205ENST00000520717 TRIM41Q8WV44 630 aa52.1■■■■■ 5.93
SNTB1-205ENST00000520717 CHD1O14646 1710 aa52.04■■■■■ 5.92
SNTB1-205ENST00000520717 SNAPC4Q5SXM2 1469 aa51.92■■■■■ 5.9
SNTB1-205ENST00000520717 FBLN2P98095 1184 aa51.9■■■■■ 5.9
SNTB1-205ENST00000520717 GRIN2BQ13224 1484 aa51.87■■■■■ 5.89
SNTB1-205ENST00000520717 RIMBP3CA6NJZ7 1639 aa51.86■■■■■ 5.89
SNTB1-205ENST00000520717 RIMBP3BA6NNM3 1639 aa51.86■■■■■ 5.89
SNTB1-205ENST00000520717 RIMBP3Q9UFD9 1639 aa51.86■■■■■ 5.89
SNTB1-205ENST00000520717 MAGI1Q96QZ7 1491 aaPredicted RBP51.83■■■■■ 5.89
SNTB1-205ENST00000520717 ABCA10Q8WWZ4 1543 aa51.83■■■■■ 5.89
SNTB1-205ENST00000520717 WRNQ14191 1432 aaPredicted RBP eCLIP51.8■■■■■ 5.88
SNTB1-205ENST00000520717 ARHGEF11O15085 1522 aa51.78■■■■■ 5.88
SNTB1-205ENST00000520717 TOP2BQ02880 1626 aa51.78■■■■■ 5.88
SNTB1-205ENST00000520717 BIVM-ERCC5R4GMW8 1640 aa51.78■■■■■ 5.88
SNTB1-205ENST00000520717 GAPVD1Q14C86 1478 aa51.76■■■■■ 5.88
SNTB1-205ENST00000520717 SYNJ1O43426 1573 aa51.71■■■■■ 5.87
SNTB1-205ENST00000520717 PBRM1Q86U86 1689 aa51.71■■■■■ 5.87
SNTB1-205ENST00000520717 ABCA5Q8WWZ7 1642 aa51.71■■■■■ 5.87
SNTB1-205ENST00000520717 CHMP7Q8WUX9 453 aaPredicted RBP51.64■■■■■ 5.86
SNTB1-205ENST00000520717 SYNJ2O15056 1496 aa51.64■■■■■ 5.86
SNTB1-205ENST00000520717 CLASP1Q7Z460 1538 aa51.48■■■■■ 5.83
SNTB1-205ENST00000520717 ARAP1Q96P48 1450 aa51.3■■■■■ 5.8
SNTB1-205ENST00000520717 CYB5RLQ6IPT4 315 aa51.29■■■■■ 5.8
SNTB1-205ENST00000520717 ADAMTS12P58397 1594 aa51.28■■■■■ 5.8
SNTB1-205ENST00000520717 ERICH3Q5RHP9 1530 aa51.21■■■■■ 5.79
SNTB1-205ENST00000520717 GRIN2AQ12879 1464 aa51.21■■■■■ 5.79
SNTB1-205ENST00000520717 FHAD1B1AJZ9 1412 aa51.14■■■■■ 5.78
SNTB1-205ENST00000520717 NUP160Q12769 1436 aa51.01■■■■■ 5.76
SNTB1-205ENST00000520717 CEP170Q5SW79 1584 aa50.98■■■■■ 5.75
SNTB1-205ENST00000520717 KIF27Q86VH2 1401 aa50.78■■■■■ 5.72
SNTB1-205ENST00000520717 SHROOM2Q13796 1616 aa50.72■■■■■ 5.71
SNTB1-205ENST00000520717 ERCC6L2Q5T890 1561 aa50.68■■■■■ 5.7
SNTB1-205ENST00000520717 IGF1RP08069 1367 aa50.64■■■■■ 5.7
SNTB1-205ENST00000520717 CUL7Q14999 1698 aa50.6■■■■■ 5.69
SNTB1-205ENST00000520717 RUSC2Q8N2Y8 1516 aa50.54■■■■■ 5.68
SNTB1-205ENST00000520717 TRHP20396 242 aaPredicted RBP50.52■■■■■ 5.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms