RNA–Protein interactions for RNA: ENST00000520578.5

G3BP1-209, Transcript of G3BP stress granule assembly factor 1, humanhuman

TSL 3

Gene G3BP1, Length 530 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
G3BP1-209ENST00000520578 NISCHQ9Y2I1 1504 aa36.11■■■■□ 3.37
G3BP1-209ENST00000520578 CCDC180Q9P1Z9 1646 aa31.76■■■□□ 2.67
G3BP1-209ENST00000520578 ZCCHC6Q5VYS8 1495 aaKnown RBP30.27■■■□□ 2.44
G3BP1-209ENST00000520578 ABCC9O60706 1549 aa30.22■■■□□ 2.43
G3BP1-209ENST00000520578 DCAF1Q9Y4B6 1507 aa29.92■■■□□ 2.38
G3BP1-209ENST00000520578 MYO15BQ96JP2 1530 aa29.74■■■□□ 2.35
G3BP1-209ENST00000520578 DCAF8L2P0C7V8 631 aa29.65■■■□□ 2.34
G3BP1-209ENST00000520578 NACADO15069 1562 aa29.61■■■□□ 2.33
G3BP1-209ENST00000520578 RB1CC1Q8TDY2 1594 aa29.43■■■□□ 2.3
G3BP1-209ENST00000520578 SCRIBQ14160 1630 aa29.02■■■□□ 2.24
G3BP1-209ENST00000520578 SHROOM4Q9ULL8 1493 aa28.97■■■□□ 2.23
G3BP1-209ENST00000520578 UNC13AQ9UPW8 1703 aa28.91■■■□□ 2.22
G3BP1-209ENST00000520578 BICRAQ9NZM4 1560 aa28.62■■■□□ 2.17
G3BP1-209ENST00000520578 PABPN1Q86U42 306 aaKnown RBP eCLIP28.35■■■□□ 2.13
G3BP1-209ENST00000520578 CECR2Q9BXF3 1484 aa28.06■■■□□ 2.08
G3BP1-209ENST00000520578 BAZ1AQ9NRL2 1556 aaPredicted RBP27.9■■■□□ 2.06
G3BP1-209ENST00000520578 MROH2BQ7Z745 1585 aa27.86■■■□□ 2.05
G3BP1-209ENST00000520578 SMARCA4P51532 1647 aa27.86■■■□□ 2.05
G3BP1-209ENST00000520578 RSF1Q96T23 1441 aaPredicted RBP27.83■■■□□ 2.05
G3BP1-209ENST00000520578 EIF4G1Q04637 1599 aaKnown RBP27.73■■■□□ 2.03
G3BP1-209ENST00000520578 SUPT5HO00267 1087 aaKnown RBP27.63■■■□□ 2.01
G3BP1-209ENST00000520578 WIZO95785 1651 aa27.62■■■□□ 2.01
G3BP1-209ENST00000520578 PEG3Q9GZU2 1588 aa27.59■■■□□ 2.01
G3BP1-209ENST00000520578 ATAD2BQ9ULI0 1458 aa27.47■■□□□ 1.99
G3BP1-209ENST00000520578 SMARCA2P51531 1590 aa27.45■■□□□ 1.99
G3BP1-209ENST00000520578 CC2D2AQ9P2K1 1620 aa27.41■■□□□ 1.98
G3BP1-209ENST00000520578 TOP2AP11388 1531 aaKnown RBP27.34■■□□□ 1.97
G3BP1-209ENST00000520578 NCAPD3P42695 1498 aa27.32■■□□□ 1.96
G3BP1-209ENST00000520578 HMGXB3Q12766 1538 aa27.28■■□□□ 1.96
G3BP1-209ENST00000520578 BAZ1BQ9UIG0 1483 aaKnown RBP27.25■■□□□ 1.95
G3BP1-209ENST00000520578 DNAJC5BQ9UF47 199 aa27.03■■□□□ 1.92
G3BP1-209ENST00000520578 CCDC88BA6NC98 1476 aa27.01■■□□□ 1.91
G3BP1-209ENST00000520578 CFTRP13569 1480 aa26.59■■□□□ 1.85
G3BP1-209ENST00000520578 CADPSQ9ULU8 1353 aa26.54■■□□□ 1.84
G3BP1-209ENST00000520578 PRDM2Q13029 1718 aa26.53■■□□□ 1.84
G3BP1-209ENST00000520578 LAMC3Q9Y6N6 1575 aa26.47■■□□□ 1.83
G3BP1-209ENST00000520578 NESP48681 1621 aa26.44■■□□□ 1.82
G3BP1-209ENST00000520578 CHIC1Q5VXU3 224 aa26.35■■□□□ 1.81
G3BP1-209ENST00000520578 ABCC8Q09428 1581 aa26.29■■□□□ 1.8
G3BP1-209ENST00000520578 FANCD2Q9BXW9 1451 aa26.25■■□□□ 1.79
G3BP1-209ENST00000520578 PDS5BQ9NTI5 1447 aa26.2■■□□□ 1.78
G3BP1-209ENST00000520578 KIF21AQ7Z4S6 1674 aa26.19■■□□□ 1.78
G3BP1-209ENST00000520578 WRNQ14191 1432 aaPredicted RBP eCLIP26.17■■□□□ 1.78
G3BP1-209ENST00000520578 SYNJ1O43426 1573 aa26.13■■□□□ 1.77
G3BP1-209ENST00000520578 CEP164Q9UPV0 1460 aa26.12■■□□□ 1.77
G3BP1-209ENST00000520578 CUX1P39880 1505 aa26.09■■□□□ 1.77
G3BP1-209ENST00000520578 BIVM-ERCC5R4GMW8 1640 aa26.09■■□□□ 1.77
G3BP1-209ENST00000520578 TOP2BQ02880 1626 aa26.07■■□□□ 1.76
G3BP1-209ENST00000520578 TRIM41Q8WV44 630 aa26.04■■□□□ 1.76
G3BP1-209ENST00000520578 DNMBPQ6XZF7 1577 aa25.99■■□□□ 1.75
G3BP1-209ENST00000520578 URB2Q14146 1524 aaKnown RBP25.98■■□□□ 1.75
G3BP1-209ENST00000520578 TOPBP1Q92547 1522 aa25.95■■□□□ 1.74
G3BP1-209ENST00000520578 MRC2Q9UBG0 1479 aa25.93■■□□□ 1.74
G3BP1-209ENST00000520578 ERCC6Q03468 1493 aa25.91■■□□□ 1.74
G3BP1-209ENST00000520578 THOC2Q8NI27 1593 aaKnown RBP25.9■■□□□ 1.74
G3BP1-209ENST00000520578 WDR62O43379 1518 aa25.85■■□□□ 1.73
G3BP1-209ENST00000520578 FGD5Q6ZNL6 1462 aa25.84■■□□□ 1.73
G3BP1-209ENST00000520578 POLA1P09884 1462 aaPredicted RBP25.79■■□□□ 1.72
G3BP1-209ENST00000520578 SOGA1O94964 1423 aa25.7■■□□□ 1.7
G3BP1-209ENST00000520578 WDR97A6NE52 1622 aa25.66■■□□□ 1.7
G3BP1-209ENST00000520578 CUX2O14529 1486 aa25.66■■□□□ 1.7
G3BP1-209ENST00000520578 RAD54L2Q9Y4B4 1467 aa25.66■■□□□ 1.7
G3BP1-209ENST00000520578 RUSC2Q8N2Y8 1516 aa25.65■■□□□ 1.7
G3BP1-209ENST00000520578 TARBP1Q13395 1621 aaKnown RBP25.65■■□□□ 1.7
G3BP1-209ENST00000520578 ABCA10Q8WWZ4 1543 aa25.63■■□□□ 1.69
G3BP1-209ENST00000520578 EEA1Q15075 1411 aa25.6■■□□□ 1.69
G3BP1-209ENST00000520578 IFT140Q96RY7 1462 aa25.54■■□□□ 1.68
G3BP1-209ENST00000520578 KIF27Q86VH2 1401 aa25.53■■□□□ 1.68
G3BP1-209ENST00000520578 FAM9AQ8IZU1 332 aaPredicted RBP25.5■■□□□ 1.67
G3BP1-209ENST00000520578 ABCA5Q8WWZ7 1642 aa25.5■■□□□ 1.67
G3BP1-209ENST00000520578 CSRNP3Q8WYN3 585 aa25.42■■□□□ 1.66
G3BP1-209ENST00000520578 ZNF608Q9ULD9 1512 aaPredicted RBP25.41■■□□□ 1.66
G3BP1-209ENST00000520578 TDRD9Q8NDG6 1382 aaKnown RBP25.41■■□□□ 1.66
G3BP1-209ENST00000520578 GAPVD1Q14C86 1478 aa25.38■■□□□ 1.65
G3BP1-209ENST00000520578 IGF1RP08069 1367 aa25.36■■□□□ 1.65
G3BP1-209ENST00000520578 EIF4G3O43432 1585 aaKnown RBP25.35■■□□□ 1.65
G3BP1-209ENST00000520578 KIF21BO75037 1637 aa25.34■■□□□ 1.65
G3BP1-209ENST00000520578 PBRM1Q86U86 1689 aa25.34■■□□□ 1.65
G3BP1-209ENST00000520578 AQRO60306 1485 aaKnown RBP eCLIP25.34■■□□□ 1.655e-8■■■■□ 26.3
G3BP1-209ENST00000520578 ERICH3Q5RHP9 1530 aa25.33■■□□□ 1.65
G3BP1-209ENST00000520578 PRXQ9BXM0 1461 aa25.33■■□□□ 1.65
G3BP1-209ENST00000520578 CUL7Q14999 1698 aa25.27■■□□□ 1.64
G3BP1-209ENST00000520578 LOC105371045A0A1W2PR82 267 aa25.25■■□□□ 1.63
G3BP1-209ENST00000520578 GRIN2BQ13224 1484 aa25.25■■□□□ 1.63
G3BP1-209ENST00000520578 GOLGA3Q08378 1498 aa25.21■■□□□ 1.63
G3BP1-209ENST00000520578 RAPGEF2Q9Y4G8 1499 aa25.21■■□□□ 1.63
G3BP1-209ENST00000520578 CARMIL1Q5VZK9 1371 aa25.19■■□□□ 1.62
G3BP1-209ENST00000520578 ADAMTS12P58397 1594 aa25.18■■□□□ 1.62
G3BP1-209ENST00000520578 SNAPC4Q5SXM2 1469 aa25.13■■□□□ 1.61
G3BP1-209ENST00000520578 MAGI1Q96QZ7 1491 aaPredicted RBP25.11■■□□□ 1.61
G3BP1-209ENST00000520578 FHAD1B1AJZ9 1412 aa25.11■■□□□ 1.61
G3BP1-209ENST00000520578 EHMT2Q96KQ7 1210 aa25.08■■□□□ 1.61
G3BP1-209ENST00000520578 TNIKQ9UKE5 1360 aa25.05■■□□□ 1.6
G3BP1-209ENST00000520578 SYNJ2O15056 1496 aa25■■□□□ 1.59
G3BP1-209ENST00000520578 UBTFP17480 764 aaKnown RBP24.96■■□□□ 1.59
G3BP1-209ENST00000520578 GRIN2AQ12879 1464 aa24.96■■□□□ 1.59
G3BP1-209ENST00000520578 CTTNBP2Q8WZ74 1663 aa24.94■■□□□ 1.58
G3BP1-209ENST00000520578 CHD1O14646 1710 aa24.89■■□□□ 1.58
G3BP1-209ENST00000520578 CEP162Q5TB80 1403 aa24.86■■□□□ 1.57
G3BP1-209ENST00000520578 CEP170Q5SW79 1584 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms