RNA–Protein interactions for RNA: ENST00000520448.5

ADAM28-206, Transcript of ADAM metallopeptidase domain 28, humanhuman

TSL 2

Gene ADAM28, Length 2,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ADAM28-206ENST00000520448 NISCHQ9Y2I1 1504 aa16.9■□□□□ 0.3
ADAM28-206ENST00000520448 CCDC180Q9P1Z9 1646 aa14.93□□□□□ -0.02
ADAM28-206ENST00000520448 AEBP2Q6ZN18 517 aaPredicted RBP14.67□□□□□ -0.06
ADAM28-206ENST00000520448 SHROOM4Q9ULL8 1493 aa14.56□□□□□ -0.08
ADAM28-206ENST00000520448 SUPT5HO00267 1087 aaKnown RBP14.42□□□□□ -0.1
ADAM28-206ENST00000520448 CHIC1Q5VXU3 224 aa14.2□□□□□ -0.14
ADAM28-206ENST00000520448 HRCP23327 699 aa14.18□□□□□ -0.14
ADAM28-206ENST00000520448 ZCCHC6Q5VYS8 1495 aaKnown RBP14.17□□□□□ -0.14
ADAM28-206ENST00000520448 MYO15BQ96JP2 1530 aa14.14□□□□□ -0.15
ADAM28-206ENST00000520448 DCAF1Q9Y4B6 1507 aa14.1□□□□□ -0.15
ADAM28-206ENST00000520448 ABCC9O60706 1549 aa14.09□□□□□ -0.15
ADAM28-206ENST00000520448 PCGF6Q9BYE7 350 aa14.04□□□□□ -0.16
ADAM28-206ENST00000520448 PPARGC1BQ86YN6 1023 aaKnown RBP13.96□□□□□ -0.17
ADAM28-206ENST00000520448 NACADO15069 1562 aa13.95□□□□□ -0.18
ADAM28-206ENST00000520448 DCAF8L2P0C7V8 631 aa13.87□□□□□ -0.19
ADAM28-206ENST00000520448 RB1CC1Q8TDY2 1594 aa13.85□□□□□ -0.19
ADAM28-206ENST00000520448 LOC105371045A0A1W2PR82 267 aa13.77□□□□□ -0.21
ADAM28-206ENST00000520448 TRIM26Q12899 539 aaPredicted RBP13.6□□□□□ -0.23
ADAM28-206ENST00000520448 SCRIBQ14160 1630 aa13.51□□□□□ -0.25
ADAM28-206ENST00000520448 UNC13AQ9UPW8 1703 aa13.45□□□□□ -0.26
ADAM28-206ENST00000520448 ZEB1P37275 1124 aaPredicted RBP13.38□□□□□ -0.27
ADAM28-206ENST00000520448 BICRAQ9NZM4 1560 aa13.37□□□□□ -0.27
ADAM28-206ENST00000520448 FAM9AQ8IZU1 332 aaPredicted RBP13.35□□□□□ -0.27
ADAM28-206ENST00000520448 TRIM41Q8WV44 630 aa13.32□□□□□ -0.28
ADAM28-206ENST00000520448 SCAF1Q9H7N4 1312 aaKnown RBP13.32□□□□□ -0.28
ADAM28-206ENST00000520448 EHMT2Q96KQ7 1210 aa13.32□□□□□ -0.28
ADAM28-206ENST00000520448 PELP1Q8IZL8 1130 aaKnown RBP13.28□□□□□ -0.28
ADAM28-206ENST00000520448 RSF1Q96T23 1441 aaPredicted RBP13.26□□□□□ -0.29
ADAM28-206ENST00000520448 PABPN1Q86U42 306 aaKnown RBP eCLIP13.19□□□□□ -0.3
ADAM28-206ENST00000520448 BAZ1AQ9NRL2 1556 aaPredicted RBP13.1□□□□□ -0.31
ADAM28-206ENST00000520448 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.09□□□□□ -0.31
ADAM28-206ENST00000520448 CECR2Q9BXF3 1484 aa13.05□□□□□ -0.32
ADAM28-206ENST00000520448 NEUROD1Q13562 356 aa13.04□□□□□ -0.32
ADAM28-206ENST00000520448 CCER1Q8TC90 406 aaPredicted RBP13.04□□□□□ -0.32
ADAM28-206ENST00000520448 ACIN1Q9UKV3 1341 aaKnown RBP13.04□□□□□ -0.32
ADAM28-206ENST00000520448 SMARCA4P51532 1647 aa13.03□□□□□ -0.32
ADAM28-206ENST00000520448 EIF4G1Q04637 1599 aaKnown RBP12.99□□□□□ -0.33
ADAM28-206ENST00000520448 MROH2BQ7Z745 1585 aa12.98□□□□□ -0.33
ADAM28-206ENST00000520448 PEG3Q9GZU2 1588 aa12.97□□□□□ -0.33
ADAM28-206ENST00000520448 TTBK1Q5TCY1 1321 aaPredicted RBP12.95□□□□□ -0.34
ADAM28-206ENST00000520448 DIEXFQ68CQ4 756 aaKnown RBP12.94□□□□□ -0.34
ADAM28-206ENST00000520448 GTF3C3Q9Y5Q9 886 aa12.94□□□□□ -0.34
ADAM28-206ENST00000520448 SMARCA2P51531 1590 aa12.91□□□□□ -0.34
ADAM28-206ENST00000520448 WIZO95785 1651 aa12.89□□□□□ -0.35
ADAM28-206ENST00000520448 CENPBP07199 599 aaPredicted RBP12.88□□□□□ -0.35
ADAM28-206ENST00000520448 ATAD2BQ9ULI0 1458 aa12.87□□□□□ -0.35
ADAM28-206ENST00000520448 NCAPD3P42695 1498 aa12.85□□□□□ -0.35
ADAM28-206ENST00000520448 HMGXB3Q12766 1538 aa12.83□□□□□ -0.36
ADAM28-206ENST00000520448 SLC24A1O60721 1099 aa12.83□□□□□ -0.36
ADAM28-206ENST00000520448 CC2D2AQ9P2K1 1620 aa12.82□□□□□ -0.36
ADAM28-206ENST00000520448 TOP2AP11388 1531 aaKnown RBP12.8□□□□□ -0.36
ADAM28-206ENST00000520448 BAZ1BQ9UIG0 1483 aaKnown RBP12.77□□□□□ -0.37
ADAM28-206ENST00000520448 CEP162Q5TB80 1403 aa12.76□□□□□ -0.37
ADAM28-206ENST00000520448 ABCC8Q09428 1581 aa12.76□□□□□ -0.37
ADAM28-206ENST00000520448 YTHDC1Q96MU7 727 aaKnown RBP12.76□□□□□ -0.37
ADAM28-206ENST00000520448 WRNQ14191 1432 aaPredicted RBP eCLIP12.75□□□□□ -0.37
ADAM28-206ENST00000520448 CCDC88BA6NC98 1476 aa12.75□□□□□ -0.37
ADAM28-206ENST00000520448 ZNF316A6NFI3 1004 aaPredicted RBP12.73□□□□□ -0.37
ADAM28-206ENST00000520448 PHF23Q9BUL5 403 aaPredicted RBP12.71□□□□□ -0.37
ADAM28-206ENST00000520448 SOGA1O94964 1423 aa12.7□□□□□ -0.38
ADAM28-206ENST00000520448 UBTFP17480 764 aaKnown RBP12.68□□□□□ -0.38
ADAM28-206ENST00000520448 TNIKQ9UKE5 1360 aa12.67□□□□□ -0.38
ADAM28-206ENST00000520448 MYT1Q01538 1121 aa12.65□□□□□ -0.38
ADAM28-206ENST00000520448 MIER1Q8N108 512 aa12.65□□□□□ -0.38
ADAM28-206ENST00000520448 RUSC2Q8N2Y8 1516 aa12.64□□□□□ -0.39
ADAM28-206ENST00000520448 CSRNP3Q8WYN3 585 aa12.63□□□□□ -0.39
ADAM28-206ENST00000520448 HNRNPUL2Q1KMD3 747 aaKnown RBP12.62□□□□□ -0.39
ADAM28-206ENST00000520448 DNAJC5BQ9UF47 199 aa12.58□□□□□ -0.4
ADAM28-206ENST00000520448 GOLGA3Q08378 1498 aa12.54□□□□□ -0.4
ADAM28-206ENST00000520448 EEA1Q15075 1411 aa12.54□□□□□ -0.4
ADAM28-206ENST00000520448 CFTRP13569 1480 aa12.47□□□□□ -0.41
ADAM28-206ENST00000520448 RANGAP1P46060 587 aaPredicted RBP12.47□□□□□ -0.41
ADAM28-206ENST00000520448 CADPSQ9ULU8 1353 aa12.46□□□□□ -0.41
ADAM28-206ENST00000520448 CLIP1P30622 1438 aa12.45□□□□□ -0.42
ADAM28-206ENST00000520448 LAMC3Q9Y6N6 1575 aa12.45□□□□□ -0.42
ADAM28-206ENST00000520448 CEP164Q9UPV0 1460 aa12.42□□□□□ -0.42
ADAM28-206ENST00000520448 APLP2Q06481 763 aa12.42□□□□□ -0.42
ADAM28-206ENST00000520448 PRDM2Q13029 1718 aa12.42□□□□□ -0.42
ADAM28-206ENST00000520448 VPS8Q8N3P4 1428 aa12.41□□□□□ -0.42
ADAM28-206ENST00000520448 SYNJ1O43426 1573 aa12.38□□□□□ -0.43
ADAM28-206ENST00000520448 KIF21BO75037 1637 aa12.37□□□□□ -0.43
ADAM28-206ENST00000520448 RAPGEF2Q9Y4G8 1499 aa12.36□□□□□ -0.43
ADAM28-206ENST00000520448 SUPT16HQ9Y5B9 1047 aaKnown RBP12.36□□□□□ -0.43
ADAM28-206ENST00000520448 PDS5BQ9NTI5 1447 aa12.34□□□□□ -0.43
ADAM28-206ENST00000520448 DHX57Q6P158 1386 aaKnown RBP12.32□□□□□ -0.44
ADAM28-206ENST00000520448 NESP48681 1621 aa12.29□□□□□ -0.44
ADAM28-206ENST00000520448 FANCD2Q9BXW9 1451 aa12.29□□□□□ -0.44
ADAM28-206ENST00000520448 KANK4Q5T7N3 995 aaPredicted RBP12.27□□□□□ -0.45
ADAM28-206ENST00000520448 CLSPNQ9HAW4 1339 aa12.26□□□□□ -0.45
ADAM28-206ENST00000520448 TSHZ2Q9NRE2 1034 aa12.25□□□□□ -0.45
ADAM28-206ENST00000520448 KCNH8Q96L42 1107 aa12.22□□□□□ -0.45
ADAM28-206ENST00000520448 BIVM-ERCC5R4GMW8 1640 aa12.21□□□□□ -0.46
ADAM28-206ENST00000520448 ARAP1Q96P48 1450 aa12.2□□□□□ -0.46
ADAM28-206ENST00000520448 ITGAEP38570 1179 aa12.2□□□□□ -0.46
ADAM28-206ENST00000520448 TOP2BQ02880 1626 aa12.2□□□□□ -0.46
ADAM28-206ENST00000520448 KIF21AQ7Z4S6 1674 aa12.2□□□□□ -0.46
ADAM28-206ENST00000520448 DNMBPQ6XZF7 1577 aa12.19□□□□□ -0.46
ADAM28-206ENST00000520448 MRC2Q9UBG0 1479 aa12.18□□□□□ -0.46
ADAM28-206ENST00000520448 BCANQ96GW7 911 aa12.18□□□□□ -0.46
ADAM28-206ENST00000520448 CUX1P39880 1505 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms