RNA–Protein interactions for RNA: ENST00000520254.5

FAM49B-217, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 4

Gene FAM49B, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-217ENST00000520254 NISCHQ9Y2I1 1504 aa46.03■■■■■ 4.96
FAM49B-217ENST00000520254 CCDC180Q9P1Z9 1646 aa40.98■■■■■ 4.15
FAM49B-217ENST00000520254 ABCC9O60706 1549 aa40.11■■■■■ 4.01
FAM49B-217ENST00000520254 RB1CC1Q8TDY2 1594 aa38.61■■■■□ 3.77
FAM49B-217ENST00000520254 DCAF8L2P0C7V8 631 aa38.6■■■■□ 3.77
FAM49B-217ENST00000520254 NACADO15069 1562 aa38.53■■■■□ 3.76
FAM49B-217ENST00000520254 ZCCHC6Q5VYS8 1495 aaKnown RBP38.35■■■■□ 3.73
FAM49B-217ENST00000520254 MYO15BQ96JP2 1530 aa38.25■■■■□ 3.71
FAM49B-217ENST00000520254 DCAF1Q9Y4B6 1507 aa38.09■■■■□ 3.69
FAM49B-217ENST00000520254 UNC13AQ9UPW8 1703 aa37.6■■■■□ 3.61
FAM49B-217ENST00000520254 PABPN1Q86U42 306 aaKnown RBP eCLIP37.45■■■■□ 3.59
FAM49B-217ENST00000520254 SCRIBQ14160 1630 aa37.42■■■■□ 3.58
FAM49B-217ENST00000520254 BICRAQ9NZM4 1560 aa37.29■■■■□ 3.56
FAM49B-217ENST00000520254 SHROOM4Q9ULL8 1493 aa37.06■■■■□ 3.52
FAM49B-217ENST00000520254 DNAJC5BQ9UF47 199 aa36.64■■■■□ 3.46
FAM49B-217ENST00000520254 EIF4G1Q04637 1599 aaKnown RBP36.4■■■■□ 3.42
FAM49B-217ENST00000520254 CC2D2AQ9P2K1 1620 aa36.25■■■■□ 3.39
FAM49B-217ENST00000520254 CECR2Q9BXF3 1484 aa36.05■■■■□ 3.36
FAM49B-217ENST00000520254 BAZ1AQ9NRL2 1556 aaPredicted RBP35.75■■■■□ 3.31
FAM49B-217ENST00000520254 SMARCA4P51532 1647 aa35.75■■■■□ 3.31
FAM49B-217ENST00000520254 SMARCA2P51531 1590 aa35.57■■■■□ 3.28
FAM49B-217ENST00000520254 ATAD2BQ9ULI0 1458 aa35.53■■■■□ 3.28
FAM49B-217ENST00000520254 NCAPD3P42695 1498 aa35.5■■■■□ 3.27
FAM49B-217ENST00000520254 MROH2BQ7Z745 1585 aa35.45■■■■□ 3.27
FAM49B-217ENST00000520254 HMGXB3Q12766 1538 aa35.38■■■■□ 3.25
FAM49B-217ENST00000520254 PEG3Q9GZU2 1588 aa35.35■■■■□ 3.25
FAM49B-217ENST00000520254 BAZ1BQ9UIG0 1483 aaKnown RBP35.33■■■■□ 3.25
FAM49B-217ENST00000520254 WIZO95785 1651 aa35.09■■■■□ 3.21
FAM49B-217ENST00000520254 RSF1Q96T23 1441 aaPredicted RBP35.05■■■■□ 3.2
FAM49B-217ENST00000520254 TOP2AP11388 1531 aaKnown RBP34.77■■■■□ 3.16
FAM49B-217ENST00000520254 ERCC6Q03468 1493 aa34.68■■■■□ 3.14
FAM49B-217ENST00000520254 NESP48681 1621 aa34.64■■■■□ 3.14
FAM49B-217ENST00000520254 LAMC3Q9Y6N6 1575 aa34.63■■■■□ 3.13
FAM49B-217ENST00000520254 CADPSQ9ULU8 1353 aa34.5■■■■□ 3.11
FAM49B-217ENST00000520254 PDS5BQ9NTI5 1447 aa34.44■■■■□ 3.1
FAM49B-217ENST00000520254 CCDC88BA6NC98 1476 aa34.31■■■■□ 3.08
FAM49B-217ENST00000520254 CFTRP13569 1480 aa34.27■■■■□ 3.08
FAM49B-217ENST00000520254 SUPT5HO00267 1087 aaKnown RBP34.27■■■■□ 3.08
FAM49B-217ENST00000520254 KIF21AQ7Z4S6 1674 aa34.27■■■■□ 3.08
FAM49B-217ENST00000520254 CUX2O14529 1486 aa34.23■■■■□ 3.07
FAM49B-217ENST00000520254 THOC2Q8NI27 1593 aaKnown RBP34.15■■■■□ 3.06
FAM49B-217ENST00000520254 FANCD2Q9BXW9 1451 aa34.14■■■■□ 3.06
FAM49B-217ENST00000520254 CEP164Q9UPV0 1460 aa34.14■■■■□ 3.06
FAM49B-217ENST00000520254 MRC2Q9UBG0 1479 aa34.07■■■■□ 3.04
FAM49B-217ENST00000520254 PRDM2Q13029 1718 aa34.05■■■■□ 3.04
FAM49B-217ENST00000520254 WDR62O43379 1518 aa33.91■■■■□ 3.02
FAM49B-217ENST00000520254 URB2Q14146 1524 aaKnown RBP33.74■■■□□ 2.99
FAM49B-217ENST00000520254 ABCC8Q09428 1581 aa33.63■■■□□ 2.97
FAM49B-217ENST00000520254 TOPBP1Q92547 1522 aa33.56■■■□□ 2.96
FAM49B-217ENST00000520254 DNMBPQ6XZF7 1577 aa33.55■■■□□ 2.96
FAM49B-217ENST00000520254 IFT140Q96RY7 1462 aa33.4■■■□□ 2.94
FAM49B-217ENST00000520254 CUX1P39880 1505 aa33.28■■■□□ 2.92
FAM49B-217ENST00000520254 POLA1P09884 1462 aaPredicted RBP33.27■■■□□ 2.92
FAM49B-217ENST00000520254 FGD5Q6ZNL6 1462 aa33.22■■■□□ 2.91
FAM49B-217ENST00000520254 SOGA1O94964 1423 aa33.17■■■□□ 2.9
FAM49B-217ENST00000520254 ZNF608Q9ULD9 1512 aaPredicted RBP33.17■■■□□ 2.9
FAM49B-217ENST00000520254 TARBP1Q13395 1621 aaKnown RBP33.15■■■□□ 2.9
FAM49B-217ENST00000520254 WRNQ14191 1432 aaPredicted RBP eCLIP33.13■■■□□ 2.89
FAM49B-217ENST00000520254 RAD54L2Q9Y4B4 1467 aa33.12■■■□□ 2.89
FAM49B-217ENST00000520254 EIF4G3O43432 1585 aaKnown RBP33.11■■■□□ 2.89
FAM49B-217ENST00000520254 DNAJC5Q9H3Z4 198 aa33.1■■■□□ 2.89
FAM49B-217ENST00000520254 TOP2BQ02880 1626 aa33.02■■■□□ 2.88
FAM49B-217ENST00000520254 BIVM-ERCC5R4GMW8 1640 aa33.01■■■□□ 2.87
FAM49B-217ENST00000520254 AQRO60306 1485 aaKnown RBP eCLIP33■■■□□ 2.87
FAM49B-217ENST00000520254 SYNJ1O43426 1573 aa33■■■□□ 2.87
FAM49B-217ENST00000520254 WDR97A6NE52 1622 aa32.99■■■□□ 2.87
FAM49B-217ENST00000520254 TDRD9Q8NDG6 1382 aaKnown RBP32.96■■■□□ 2.87
FAM49B-217ENST00000520254 ABCA10Q8WWZ4 1543 aa32.87■■■□□ 2.85
FAM49B-217ENST00000520254 OSCARQ8IYS5 282 aa32.81■■■□□ 2.84
FAM49B-217ENST00000520254 GRIN2BQ13224 1484 aa32.8■■■□□ 2.84
FAM49B-217ENST00000520254 GAPVD1Q14C86 1478 aa32.8■■■□□ 2.84
FAM49B-217ENST00000520254 SNAPC4Q5SXM2 1469 aa32.75■■■□□ 2.83
FAM49B-217ENST00000520254 FBLN2P98095 1184 aa32.74■■■□□ 2.83
FAM49B-217ENST00000520254 ABCA5Q8WWZ7 1642 aa32.73■■■□□ 2.83
FAM49B-217ENST00000520254 PBRM1Q86U86 1689 aa32.72■■■□□ 2.83
FAM49B-217ENST00000520254 MAGI1Q96QZ7 1491 aaPredicted RBP32.72■■■□□ 2.83
FAM49B-217ENST00000520254 CHD1O14646 1710 aa32.66■■■□□ 2.82
FAM49B-217ENST00000520254 CHMP7Q8WUX9 453 aaPredicted RBP32.62■■■□□ 2.81
FAM49B-217ENST00000520254 SYNJ2O15056 1496 aa32.58■■■□□ 2.81
FAM49B-217ENST00000520254 ERICH3Q5RHP9 1530 aa32.51■■■□□ 2.8
FAM49B-217ENST00000520254 KIF27Q86VH2 1401 aa32.48■■■□□ 2.79
FAM49B-217ENST00000520254 ADAMTS12P58397 1594 aa32.46■■■□□ 2.79
FAM49B-217ENST00000520254 FHAD1B1AJZ9 1412 aa32.42■■■□□ 2.78
FAM49B-217ENST00000520254 TRIM41Q8WV44 630 aa32.4■■■□□ 2.78
FAM49B-217ENST00000520254 GRIN2AQ12879 1464 aa32.36■■■□□ 2.77
FAM49B-217ENST00000520254 CLASP1Q7Z460 1538 aa32.29■■■□□ 2.76
FAM49B-217ENST00000520254 ARHGEF11O15085 1522 aa32.26■■■□□ 2.76
FAM49B-217ENST00000520254 CUL7Q14999 1698 aa32.26■■■□□ 2.75
FAM49B-217ENST00000520254 RIMBP3CA6NJZ7 1639 aa32.25■■■□□ 2.75
FAM49B-217ENST00000520254 RIMBP3BA6NNM3 1639 aa32.25■■■□□ 2.75
FAM49B-217ENST00000520254 RIMBP3Q9UFD9 1639 aa32.25■■■□□ 2.75
FAM49B-217ENST00000520254 IGF1RP08069 1367 aa32.22■■■□□ 2.75
FAM49B-217ENST00000520254 NUP160Q12769 1436 aa32.17■■■□□ 2.74
FAM49B-217ENST00000520254 CEP170Q5SW79 1584 aa32.16■■■□□ 2.74
FAM49B-217ENST00000520254 CARMIL1Q5VZK9 1371 aa32.1■■■□□ 2.73
FAM49B-217ENST00000520254 RUSC2Q8N2Y8 1516 aa32.03■■■□□ 2.72
FAM49B-217ENST00000520254 CYB5RLQ6IPT4 315 aa31.98■■■□□ 2.71
FAM49B-217ENST00000520254 ARAP1Q96P48 1450 aa31.97■■■□□ 2.71
FAM49B-217ENST00000520254 RAPGEF2Q9Y4G8 1499 aa31.93■■■□□ 2.7
FAM49B-217ENST00000520254 SHROOM2Q13796 1616 aa31.92■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms