RNA–Protein interactions for RNA: ENST00000520140.5

VPS37A-206, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS37A, Length 2,102 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-206ENST00000520140 NISCHQ9Y2I1 1504 aa33.6■■■□□ 2.97
VPS37A-206ENST00000520140 CCDC180Q9P1Z9 1646 aa29.61■■■□□ 2.33
VPS37A-206ENST00000520140 ABCC9O60706 1549 aa28.71■■■□□ 2.19
VPS37A-206ENST00000520140 DCAF8L2P0C7V8 631 aa28.13■■■□□ 2.09
VPS37A-206ENST00000520140 ZCCHC6Q5VYS8 1495 aaKnown RBP28.07■■■□□ 2.08
VPS37A-206ENST00000520140 NACADO15069 1562 aa27.73■■■□□ 2.03
VPS37A-206ENST00000520140 DCAF1Q9Y4B6 1507 aa27.71■■■□□ 2.03
VPS37A-206ENST00000520140 RB1CC1Q8TDY2 1594 aa27.69■■■□□ 2.02
VPS37A-206ENST00000520140 MYO15BQ96JP2 1530 aa27.62■■■□□ 2.01
VPS37A-206ENST00000520140 SCRIBQ14160 1630 aa27.23■■□□□ 1.95
VPS37A-206ENST00000520140 UNC13AQ9UPW8 1703 aa27.17■■□□□ 1.94
VPS37A-206ENST00000520140 SHROOM4Q9ULL8 1493 aa27.07■■□□□ 1.92
VPS37A-206ENST00000520140 PABPN1Q86U42 306 aaKnown RBP eCLIP26.96■■□□□ 1.91
VPS37A-206ENST00000520140 BICRAQ9NZM4 1560 aa26.87■■□□□ 1.89
VPS37A-206ENST00000520140 CECR2Q9BXF3 1484 aa26.22■■□□□ 1.79
VPS37A-206ENST00000520140 EIF4G1Q04637 1599 aaKnown RBP26.13■■□□□ 1.77
VPS37A-206ENST00000520140 BAZ1AQ9NRL2 1556 aaPredicted RBP26.01■■□□□ 1.75
VPS37A-206ENST00000520140 SMARCA4P51532 1647 aa26■■□□□ 1.75
VPS37A-206ENST00000520140 MROH2BQ7Z745 1585 aa25.97■■□□□ 1.75
VPS37A-206ENST00000520140 DNAJC5BQ9UF47 199 aa25.96■■□□□ 1.75
VPS37A-206ENST00000520140 CC2D2AQ9P2K1 1620 aa25.94■■□□□ 1.74
VPS37A-206ENST00000520140 RSF1Q96T23 1441 aaPredicted RBP25.81■■□□□ 1.72
VPS37A-206ENST00000520140 WIZO95785 1651 aa25.75■■□□□ 1.71
VPS37A-206ENST00000520140 ATAD2BQ9ULI0 1458 aa25.72■■□□□ 1.71
VPS37A-206ENST00000520140 SUPT5HO00267 1087 aaKnown RBP25.69■■□□□ 1.7
VPS37A-206ENST00000520140 SMARCA2P51531 1590 aa25.68■■□□□ 1.7
VPS37A-206ENST00000520140 PEG3Q9GZU2 1588 aa25.65■■□□□ 1.7
VPS37A-206ENST00000520140 NCAPD3P42695 1498 aa25.59■■□□□ 1.69
VPS37A-206ENST00000520140 BAZ1BQ9UIG0 1483 aaKnown RBP25.57■■□□□ 1.68
VPS37A-206ENST00000520140 HMGXB3Q12766 1538 aa25.5■■□□□ 1.67
VPS37A-206ENST00000520140 TOP2AP11388 1531 aaKnown RBP25.4■■□□□ 1.66
VPS37A-206ENST00000520140 CCDC88BA6NC98 1476 aa25.16■■□□□ 1.62
VPS37A-206ENST00000520140 NESP48681 1621 aa24.99■■□□□ 1.59
VPS37A-206ENST00000520140 CADPSQ9ULU8 1353 aa24.91■■□□□ 1.58
VPS37A-206ENST00000520140 LAMC3Q9Y6N6 1575 aa24.86■■□□□ 1.57
VPS37A-206ENST00000520140 CFTRP13569 1480 aa24.85■■□□□ 1.57
VPS37A-206ENST00000520140 PRDM2Q13029 1718 aa24.72■■□□□ 1.55
VPS37A-206ENST00000520140 KIF21AQ7Z4S6 1674 aa24.69■■□□□ 1.54
VPS37A-206ENST00000520140 PDS5BQ9NTI5 1447 aa24.69■■□□□ 1.54
VPS37A-206ENST00000520140 ERCC6Q03468 1493 aa24.68■■□□□ 1.54
VPS37A-206ENST00000520140 FANCD2Q9BXW9 1451 aa24.66■■□□□ 1.54
VPS37A-206ENST00000520140 CEP164Q9UPV0 1460 aa24.57■■□□□ 1.52
VPS37A-206ENST00000520140 ABCC8Q09428 1581 aa24.47■■□□□ 1.51
VPS37A-206ENST00000520140 MRC2Q9UBG0 1479 aa24.42■■□□□ 1.5
VPS37A-206ENST00000520140 THOC2Q8NI27 1593 aaKnown RBP24.42■■□□□ 1.5
VPS37A-206ENST00000520140 URB2Q14146 1524 aaKnown RBP24.39■■□□□ 1.5
VPS37A-206ENST00000520140 WRNQ14191 1432 aaPredicted RBP eCLIP24.33■■□□□ 1.49
VPS37A-206ENST00000520140 CUX1P39880 1505 aa24.32■■□□□ 1.48
VPS37A-206ENST00000520140 TOPBP1Q92547 1522 aa24.31■■□□□ 1.48
VPS37A-206ENST00000520140 WDR62O43379 1518 aa24.31■■□□□ 1.48
VPS37A-206ENST00000520140 DNMBPQ6XZF7 1577 aa24.3■■□□□ 1.48
VPS37A-206ENST00000520140 SYNJ1O43426 1573 aa24.29■■□□□ 1.48
VPS37A-206ENST00000520140 TOP2BQ02880 1626 aa24.2■■□□□ 1.46
VPS37A-206ENST00000520140 BIVM-ERCC5R4GMW8 1640 aa24.18■■□□□ 1.46
VPS37A-206ENST00000520140 FGD5Q6ZNL6 1462 aa24.17■■□□□ 1.46
VPS37A-206ENST00000520140 TRIM41Q8WV44 630 aa24.16■■□□□ 1.46
VPS37A-206ENST00000520140 POLA1P09884 1462 aaPredicted RBP24.15■■□□□ 1.46
VPS37A-206ENST00000520140 CHIC1Q5VXU3 224 aa24.14■■□□□ 1.46
VPS37A-206ENST00000520140 CUX2O14529 1486 aa24.12■■□□□ 1.45
VPS37A-206ENST00000520140 RAD54L2Q9Y4B4 1467 aa24.1■■□□□ 1.45
VPS37A-206ENST00000520140 SOGA1O94964 1423 aa24.06■■□□□ 1.44
VPS37A-206ENST00000520140 TARBP1Q13395 1621 aaKnown RBP24■■□□□ 1.43
VPS37A-206ENST00000520140 IFT140Q96RY7 1462 aa23.99■■□□□ 1.43
VPS37A-206ENST00000520140 ZNF608Q9ULD9 1512 aaPredicted RBP23.96■■□□□ 1.43
VPS37A-206ENST00000520140 TDRD9Q8NDG6 1382 aaKnown RBP23.93■■□□□ 1.42
VPS37A-206ENST00000520140 WDR97A6NE52 1622 aa23.91■■□□□ 1.42
VPS37A-206ENST00000520140 ABCA10Q8WWZ4 1543 aa23.9■■□□□ 1.42
VPS37A-206ENST00000520140 AQRO60306 1485 aaKnown RBP eCLIP23.89■■□□□ 1.42
VPS37A-206ENST00000520140 EIF4G3O43432 1585 aaKnown RBP23.85■■□□□ 1.41
VPS37A-206ENST00000520140 RUSC2Q8N2Y8 1516 aa23.81■■□□□ 1.4
VPS37A-206ENST00000520140 GAPVD1Q14C86 1478 aa23.79■■□□□ 1.4
VPS37A-206ENST00000520140 ABCA5Q8WWZ7 1642 aa23.78■■□□□ 1.4
VPS37A-206ENST00000520140 FAM9AQ8IZU1 332 aaPredicted RBP23.77■■□□□ 1.4
VPS37A-206ENST00000520140 KIF27Q86VH2 1401 aa23.76■■□□□ 1.39
VPS37A-206ENST00000520140 PBRM1Q86U86 1689 aa23.73■■□□□ 1.39
VPS37A-206ENST00000520140 GRIN2BQ13224 1484 aa23.69■■□□□ 1.38
VPS37A-206ENST00000520140 SNAPC4Q5SXM2 1469 aa23.65■■□□□ 1.38
VPS37A-206ENST00000520140 IGF1RP08069 1367 aa23.62■■□□□ 1.37
VPS37A-206ENST00000520140 ERICH3Q5RHP9 1530 aa23.61■■□□□ 1.37
VPS37A-206ENST00000520140 FBLN2P98095 1184 aa23.6■■□□□ 1.37
VPS37A-206ENST00000520140 CSRNP3Q8WYN3 585 aa23.56■■□□□ 1.36
VPS37A-206ENST00000520140 MAGI1Q96QZ7 1491 aaPredicted RBP23.55■■□□□ 1.36
VPS37A-206ENST00000520140 EEA1Q15075 1411 aa23.55■■□□□ 1.36
VPS37A-206ENST00000520140 EHMT2Q96KQ7 1210 aa23.54■■□□□ 1.36
VPS37A-206ENST00000520140 ADAMTS12P58397 1594 aa23.53■■□□□ 1.36
VPS37A-206ENST00000520140 CHMP7Q8WUX9 453 aaPredicted RBP23.51■■□□□ 1.35
VPS37A-206ENST00000520140 CARMIL1Q5VZK9 1371 aa23.51■■□□□ 1.35
VPS37A-206ENST00000520140 CUL7Q14999 1698 aa23.5■■□□□ 1.35
VPS37A-206ENST00000520140 CHD1O14646 1710 aa23.5■■□□□ 1.35
VPS37A-206ENST00000520140 FHAD1B1AJZ9 1412 aa23.49■■□□□ 1.35
VPS37A-206ENST00000520140 SYNJ2O15056 1496 aa23.47■■□□□ 1.35
VPS37A-206ENST00000520140 GRIN2AQ12879 1464 aa23.41■■□□□ 1.34
VPS37A-206ENST00000520140 PRXQ9BXM0 1461 aa23.41■■□□□ 1.34
VPS37A-206ENST00000520140 RAPGEF2Q9Y4G8 1499 aa23.4■■□□□ 1.34
VPS37A-206ENST00000520140 KIF21BO75037 1637 aa23.32■■□□□ 1.32
VPS37A-206ENST00000520140 OSCARQ8IYS5 282 aa23.3■■□□□ 1.32
VPS37A-206ENST00000520140 CEP170Q5SW79 1584 aa23.29■■□□□ 1.32
VPS37A-206ENST00000520140 LOC105371045A0A1W2PR82 267 aa23.27■■□□□ 1.32
VPS37A-206ENST00000520140 UBTFP17480 764 aaKnown RBP23.26■■□□□ 1.31
VPS37A-206ENST00000520140 GOLGA3Q08378 1498 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms