RNA–Protein interactions for RNA: ENST00000519977.5

TOP1MT-210, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 892 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-210ENST00000519977 NISCHQ9Y2I1 1504 aa40.43■■■■■ 4.06
TOP1MT-210ENST00000519977 CCDC180Q9P1Z9 1646 aa36.31■■■■□ 3.4
TOP1MT-210ENST00000519977 ABCC9O60706 1549 aa35.67■■■■□ 3.3
TOP1MT-210ENST00000519977 RB1CC1Q8TDY2 1594 aa34.26■■■■□ 3.07
TOP1MT-210ENST00000519977 NACADO15069 1562 aa34.11■■■■□ 3.05
TOP1MT-210ENST00000519977 MYO15BQ96JP2 1530 aa33.78■■■■□ 3
TOP1MT-210ENST00000519977 DCAF8L2P0C7V8 631 aa33.7■■■□□ 2.99
TOP1MT-210ENST00000519977 ZCCHC6Q5VYS8 1495 aaKnown RBP33.65■■■□□ 2.98
TOP1MT-210ENST00000519977 UNC13AQ9UPW8 1703 aa33.59■■■□□ 2.97
TOP1MT-210ENST00000519977 DCAF1Q9Y4B6 1507 aa33.49■■■□□ 2.95
TOP1MT-210ENST00000519977 BICRAQ9NZM4 1560 aa33.21■■■□□ 2.91
TOP1MT-210ENST00000519977 PABPN1Q86U42 306 aaKnown RBP eCLIP33.12■■■□□ 2.89
TOP1MT-210ENST00000519977 SCRIBQ14160 1630 aa32.99■■■□□ 2.87
TOP1MT-210ENST00000519977 DNAJC5BQ9UF47 199 aa32.91■■■□□ 2.86
TOP1MT-210ENST00000519977 SHROOM4Q9ULL8 1493 aa32.89■■■□□ 2.86
TOP1MT-210ENST00000519977 EIF4G1Q04637 1599 aaKnown RBP32.36■■■□□ 2.77
TOP1MT-210ENST00000519977 CC2D2AQ9P2K1 1620 aa32.33■■■□□ 2.77
TOP1MT-210ENST00000519977 CECR2Q9BXF3 1484 aa32.1■■■□□ 2.73
TOP1MT-210ENST00000519977 SMARCA4P51532 1647 aa31.53■■■□□ 2.64
TOP1MT-210ENST00000519977 BAZ1AQ9NRL2 1556 aaPredicted RBP31.41■■■□□ 2.62
TOP1MT-210ENST00000519977 NCAPD3P42695 1498 aa31.39■■■□□ 2.62
TOP1MT-210ENST00000519977 SMARCA2P51531 1590 aa31.39■■■□□ 2.61
TOP1MT-210ENST00000519977 ATAD2BQ9ULI0 1458 aa31.35■■■□□ 2.61
TOP1MT-210ENST00000519977 HMGXB3Q12766 1538 aa31.32■■■□□ 2.6
TOP1MT-210ENST00000519977 PEG3Q9GZU2 1588 aa31.24■■■□□ 2.59
TOP1MT-210ENST00000519977 MROH2BQ7Z745 1585 aa31.13■■■□□ 2.57
TOP1MT-210ENST00000519977 BAZ1BQ9UIG0 1483 aaKnown RBP31.12■■■□□ 2.57
TOP1MT-210ENST00000519977 WIZO95785 1651 aa30.84■■■□□ 2.53
TOP1MT-210ENST00000519977 ERCC6Q03468 1493 aa30.81■■■□□ 2.52
TOP1MT-210ENST00000519977 NESP48681 1621 aa30.75■■■□□ 2.51
TOP1MT-210ENST00000519977 LAMC3Q9Y6N6 1575 aa30.73■■■□□ 2.51
TOP1MT-210ENST00000519977 CUX2O14529 1486 aa30.66■■■□□ 2.5
TOP1MT-210ENST00000519977 RSF1Q96T23 1441 aaPredicted RBP30.58■■■□□ 2.49
TOP1MT-210ENST00000519977 KIF21AQ7Z4S6 1674 aa30.55■■■□□ 2.48
TOP1MT-210ENST00000519977 THOC2Q8NI27 1593 aaKnown RBP30.52■■■□□ 2.48
TOP1MT-210ENST00000519977 TOP2AP11388 1531 aaKnown RBP30.52■■■□□ 2.48
TOP1MT-210ENST00000519977 PDS5BQ9NTI5 1447 aa30.42■■■□□ 2.46
TOP1MT-210ENST00000519977 CADPSQ9ULU8 1353 aa30.41■■■□□ 2.46
TOP1MT-210ENST00000519977 PRDM2Q13029 1718 aa30.23■■■□□ 2.43
TOP1MT-210ENST00000519977 CFTRP13569 1480 aa30.2■■■□□ 2.43
TOP1MT-210ENST00000519977 MRC2Q9UBG0 1479 aa30.19■■■□□ 2.42
TOP1MT-210ENST00000519977 CEP164Q9UPV0 1460 aa30.17■■■□□ 2.42
TOP1MT-210ENST00000519977 WDR62O43379 1518 aa30.16■■■□□ 2.42
TOP1MT-210ENST00000519977 FANCD2Q9BXW9 1451 aa30.12■■■□□ 2.41
TOP1MT-210ENST00000519977 CCDC88BA6NC98 1476 aa30.04■■■□□ 2.4
TOP1MT-210ENST00000519977 DNAJC5Q9H3Z4 198 aa29.97■■■□□ 2.39
TOP1MT-210ENST00000519977 URB2Q14146 1524 aaKnown RBP29.86■■■□□ 2.37
TOP1MT-210ENST00000519977 TOPBP1Q92547 1522 aa29.62■■■□□ 2.33
TOP1MT-210ENST00000519977 DNMBPQ6XZF7 1577 aa29.61■■■□□ 2.33
TOP1MT-210ENST00000519977 ABCC8Q09428 1581 aa29.6■■■□□ 2.33
TOP1MT-210ENST00000519977 IFT140Q96RY7 1462 aa29.52■■■□□ 2.32
TOP1MT-210ENST00000519977 EIF4G3O43432 1585 aaKnown RBP29.4■■■□□ 2.3
TOP1MT-210ENST00000519977 SUPT5HO00267 1087 aaKnown RBP29.4■■■□□ 2.3
TOP1MT-210ENST00000519977 ZNF608Q9ULD9 1512 aaPredicted RBP29.39■■■□□ 2.3
TOP1MT-210ENST00000519977 TARBP1Q13395 1621 aaKnown RBP29.38■■■□□ 2.29
TOP1MT-210ENST00000519977 POLA1P09884 1462 aaPredicted RBP29.34■■■□□ 2.29
TOP1MT-210ENST00000519977 CUX1P39880 1505 aa29.26■■■□□ 2.27
TOP1MT-210ENST00000519977 FGD5Q6ZNL6 1462 aa29.22■■■□□ 2.27
TOP1MT-210ENST00000519977 WDR97A6NE52 1622 aa29.2■■■□□ 2.27
TOP1MT-210ENST00000519977 RAD54L2Q9Y4B4 1467 aa29.16■■■□□ 2.26
TOP1MT-210ENST00000519977 CHD1O14646 1710 aa29.14■■■□□ 2.25
TOP1MT-210ENST00000519977 SOGA1O94964 1423 aa29.13■■■□□ 2.25
TOP1MT-210ENST00000519977 AQRO60306 1485 aaKnown RBP eCLIP29.13■■■□□ 2.255e-15■■■■■ 69.3
TOP1MT-210ENST00000519977 OSCARQ8IYS5 282 aa29.13■■■□□ 2.25
TOP1MT-210ENST00000519977 BIVM-ERCC5R4GMW8 1640 aa29.02■■■□□ 2.24
TOP1MT-210ENST00000519977 PBRM1Q86U86 1689 aa29■■■□□ 2.23
TOP1MT-210ENST00000519977 TDRD9Q8NDG6 1382 aaKnown RBP28.98■■■□□ 2.23
TOP1MT-210ENST00000519977 TOP2BQ02880 1626 aa28.96■■■□□ 2.23
TOP1MT-210ENST00000519977 SNAPC4Q5SXM2 1469 aa28.94■■■□□ 2.22
TOP1MT-210ENST00000519977 ABCA5Q8WWZ7 1642 aa28.94■■■□□ 2.22
TOP1MT-210ENST00000519977 RIMBP3CA6NJZ7 1639 aa28.93■■■□□ 2.22
TOP1MT-210ENST00000519977 RIMBP3BA6NNM3 1639 aa28.93■■■□□ 2.22
TOP1MT-210ENST00000519977 RIMBP3Q9UFD9 1639 aa28.93■■■□□ 2.22
TOP1MT-210ENST00000519977 ABCA10Q8WWZ4 1543 aa28.92■■■□□ 2.22
TOP1MT-210ENST00000519977 SYNJ1O43426 1573 aa28.92■■■□□ 2.22
TOP1MT-210ENST00000519977 MAGI1Q96QZ7 1491 aaPredicted RBP28.91■■■□□ 2.22
TOP1MT-210ENST00000519977 GRIN2BQ13224 1484 aa28.91■■■□□ 2.22
TOP1MT-210ENST00000519977 WRNQ14191 1432 aaPredicted RBP eCLIP28.88■■■□□ 2.21
TOP1MT-210ENST00000519977 GAPVD1Q14C86 1478 aa28.84■■■□□ 2.21
TOP1MT-210ENST00000519977 ARHGEF11O15085 1522 aa28.84■■■□□ 2.21
TOP1MT-210ENST00000519977 TRIM41Q8WV44 630 aa28.83■■■□□ 2.21
TOP1MT-210ENST00000519977 SYNJ2O15056 1496 aa28.78■■■□□ 2.2
TOP1MT-210ENST00000519977 FBLN2P98095 1184 aa28.78■■■□□ 2.2
TOP1MT-210ENST00000519977 CLASP1Q7Z460 1538 aa28.74■■■□□ 2.19
TOP1MT-210ENST00000519977 ADAMTS12P58397 1594 aa28.68■■■□□ 2.18
TOP1MT-210ENST00000519977 CHMP7Q8WUX9 453 aaPredicted RBP28.66■■■□□ 2.18
TOP1MT-210ENST00000519977 ERICH3Q5RHP9 1530 aa28.6■■■□□ 2.17
TOP1MT-210ENST00000519977 GRIN2AQ12879 1464 aa28.56■■■□□ 2.16
TOP1MT-210ENST00000519977 ARAP1Q96P48 1450 aa28.56■■■□□ 2.16
TOP1MT-210ENST00000519977 FHAD1B1AJZ9 1412 aa28.49■■■□□ 2.15
TOP1MT-210ENST00000519977 CEP170Q5SW79 1584 aa28.47■■■□□ 2.15
TOP1MT-210ENST00000519977 NUP160Q12769 1436 aa28.43■■■□□ 2.14
TOP1MT-210ENST00000519977 CYB5RLQ6IPT4 315 aa28.4■■■□□ 2.14
TOP1MT-210ENST00000519977 SHROOM2Q13796 1616 aa28.36■■■□□ 2.13
TOP1MT-210ENST00000519977 CUL7Q14999 1698 aa28.35■■■□□ 2.13
TOP1MT-210ENST00000519977 KIF27Q86VH2 1401 aa28.31■■■□□ 2.12
TOP1MT-210ENST00000519977 RUSC2Q8N2Y8 1516 aa28.28■■■□□ 2.12
TOP1MT-210ENST00000519977 ERCC6L2Q5T890 1561 aa28.25■■■□□ 2.11
TOP1MT-210ENST00000519977 IGF1RP08069 1367 aa28.14■■■□□ 2.1
TOP1MT-210ENST00000519977 PRG4Q92954 1404 aaPredicted RBP28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms