RNA–Protein interactions for RNA: ENST00000519921.5

GPAT4-204, Transcript of glycerol-3-phosphate acyltransferase 4, humanhuman

TSL 5

Gene GPAT4, Length 997 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPAT4-204ENST00000519921 NISCHQ9Y2I1 1504 aa26.05■■□□□ 1.76
GPAT4-204ENST00000519921 CCDC180Q9P1Z9 1646 aa23.15■■□□□ 1.3
GPAT4-204ENST00000519921 ABCC9O60706 1549 aa22.63■■□□□ 1.21
GPAT4-204ENST00000519921 DCAF8L2P0C7V8 631 aa21.79■■□□□ 1.08
GPAT4-204ENST00000519921 RB1CC1Q8TDY2 1594 aa21.76■■□□□ 1.07
GPAT4-204ENST00000519921 NACADO15069 1562 aa21.72■■□□□ 1.07
GPAT4-204ENST00000519921 ZCCHC6Q5VYS8 1495 aaKnown RBP21.7■■□□□ 1.06
GPAT4-204ENST00000519921 MYO15BQ96JP2 1530 aa21.57■■□□□ 1.04
GPAT4-204ENST00000519921 DCAF1Q9Y4B6 1507 aa21.51■■□□□ 1.03
GPAT4-204ENST00000519921 UNC13AQ9UPW8 1703 aa21.38■■□□□ 1.01
GPAT4-204ENST00000519921 SCRIBQ14160 1630 aa21.16■□□□□ 0.98
GPAT4-204ENST00000519921 PABPN1Q86U42 306 aaKnown RBP eCLIP21.16■□□□□ 0.98
GPAT4-204ENST00000519921 BICRAQ9NZM4 1560 aa21.14■□□□□ 0.97
GPAT4-204ENST00000519921 SHROOM4Q9ULL8 1493 aa20.8■□□□□ 0.92
GPAT4-204ENST00000519921 DNAJC5BQ9UF47 199 aa20.75■□□□□ 0.91
GPAT4-204ENST00000519921 EIF4G1Q04637 1599 aaKnown RBP20.55■□□□□ 0.88
GPAT4-204ENST00000519921 CC2D2AQ9P2K1 1620 aa20.48■□□□□ 0.87
GPAT4-204ENST00000519921 CECR2Q9BXF3 1484 aa20.32■□□□□ 0.84
GPAT4-204ENST00000519921 SMARCA4P51532 1647 aa20.23■□□□□ 0.83
GPAT4-204ENST00000519921 BAZ1AQ9NRL2 1556 aaPredicted RBP20.17■□□□□ 0.82
GPAT4-204ENST00000519921 MROH2BQ7Z745 1585 aa20.11■□□□□ 0.81
GPAT4-204ENST00000519921 ATAD2BQ9ULI0 1458 aa20.08■□□□□ 0.81
GPAT4-204ENST00000519921 NCAPD3P42695 1498 aa20.04■□□□□ 0.8
GPAT4-204ENST00000519921 SMARCA2P51531 1590 aa20.04■□□□□ 0.8
GPAT4-204ENST00000519921 PEG3Q9GZU2 1588 aa19.99■□□□□ 0.79
GPAT4-204ENST00000519921 HMGXB3Q12766 1538 aa19.95■□□□□ 0.78
GPAT4-204ENST00000519921 WIZO95785 1651 aa19.93■□□□□ 0.78
GPAT4-204ENST00000519921 BAZ1BQ9UIG0 1483 aaKnown RBP19.92■□□□□ 0.78
GPAT4-204ENST00000519921 RSF1Q96T23 1441 aaPredicted RBP19.86■□□□□ 0.77
GPAT4-204ENST00000519921 SUPT5HO00267 1087 aaKnown RBP19.66■□□□□ 0.74
GPAT4-204ENST00000519921 TOP2AP11388 1531 aaKnown RBP19.66■□□□□ 0.74
GPAT4-204ENST00000519921 NESP48681 1621 aa19.62■□□□□ 0.73
GPAT4-204ENST00000519921 LAMC3Q9Y6N6 1575 aa19.53■□□□□ 0.72
GPAT4-204ENST00000519921 ERCC6Q03468 1493 aa19.47■□□□□ 0.71
GPAT4-204ENST00000519921 CADPSQ9ULU8 1353 aa19.46■□□□□ 0.71
GPAT4-204ENST00000519921 CCDC88BA6NC98 1476 aa19.44■□□□□ 0.7
GPAT4-204ENST00000519921 KIF21AQ7Z4S6 1674 aa19.41■□□□□ 0.7
GPAT4-204ENST00000519921 PDS5BQ9NTI5 1447 aa19.36■□□□□ 0.69
GPAT4-204ENST00000519921 CFTRP13569 1480 aa19.35■□□□□ 0.69
GPAT4-204ENST00000519921 THOC2Q8NI27 1593 aaKnown RBP19.3■□□□□ 0.68
GPAT4-204ENST00000519921 PRDM2Q13029 1718 aa19.29■□□□□ 0.68
GPAT4-204ENST00000519921 FANCD2Q9BXW9 1451 aa19.26■□□□□ 0.67
GPAT4-204ENST00000519921 CUX2O14529 1486 aa19.22■□□□□ 0.67
GPAT4-204ENST00000519921 CEP164Q9UPV0 1460 aa19.22■□□□□ 0.67
GPAT4-204ENST00000519921 MRC2Q9UBG0 1479 aa19.18■□□□□ 0.66
GPAT4-204ENST00000519921 WDR62O43379 1518 aa19.12■□□□□ 0.65
GPAT4-204ENST00000519921 URB2Q14146 1524 aaKnown RBP19.08■□□□□ 0.64
GPAT4-204ENST00000519921 TOPBP1Q92547 1522 aa18.96■□□□□ 0.63
GPAT4-204ENST00000519921 DNMBPQ6XZF7 1577 aa18.94■□□□□ 0.62
GPAT4-204ENST00000519921 ABCC8Q09428 1581 aa18.92■□□□□ 0.62
GPAT4-204ENST00000519921 CUX1P39880 1505 aa18.85■□□□□ 0.61
GPAT4-204ENST00000519921 CHIC1Q5VXU3 224 aa18.85■□□□□ 0.61
GPAT4-204ENST00000519921 POLA1P09884 1462 aaPredicted RBP18.8■□□□□ 0.6
GPAT4-204ENST00000519921 IFT140Q96RY7 1462 aa18.8■□□□□ 0.6
GPAT4-204ENST00000519921 TARBP1Q13395 1621 aaKnown RBP18.78■□□□□ 0.6
GPAT4-204ENST00000519921 FGD5Q6ZNL6 1462 aa18.77■□□□□ 0.59
GPAT4-204ENST00000519921 ZNF608Q9ULD9 1512 aaPredicted RBP18.76■□□□□ 0.59
GPAT4-204ENST00000519921 RAD54L2Q9Y4B4 1467 aa18.75■□□□□ 0.59
GPAT4-204ENST00000519921 SOGA1O94964 1423 aa18.72■□□□□ 0.59
GPAT4-204ENST00000519921 SYNJ1O43426 1573 aa18.72■□□□□ 0.59
GPAT4-204ENST00000519921 WRNQ14191 1432 aaPredicted RBP eCLIP18.71■□□□□ 0.59
GPAT4-204ENST00000519921 BIVM-ERCC5R4GMW8 1640 aa18.71■□□□□ 0.58
GPAT4-204ENST00000519921 EIF4G3O43432 1585 aaKnown RBP18.7■□□□□ 0.58
GPAT4-204ENST00000519921 TOP2BQ02880 1626 aa18.69■□□□□ 0.58
GPAT4-204ENST00000519921 AQRO60306 1485 aaKnown RBP eCLIP18.67■□□□□ 0.589e-14■■■■□ 22.1
GPAT4-204ENST00000519921 WDR97A6NE52 1622 aa18.65■□□□□ 0.58
GPAT4-204ENST00000519921 TDRD9Q8NDG6 1382 aaKnown RBP18.62■□□□□ 0.57
GPAT4-204ENST00000519921 DNAJC5Q9H3Z4 198 aa18.6■□□□□ 0.57
GPAT4-204ENST00000519921 TRIM41Q8WV44 630 aa18.59■□□□□ 0.57
GPAT4-204ENST00000519921 ABCA10Q8WWZ4 1543 aa18.57■□□□□ 0.56
GPAT4-204ENST00000519921 PBRM1Q86U86 1689 aa18.53■□□□□ 0.56
GPAT4-204ENST00000519921 ABCA5Q8WWZ7 1642 aa18.52■□□□□ 0.56
GPAT4-204ENST00000519921 GAPVD1Q14C86 1478 aa18.51■□□□□ 0.55
GPAT4-204ENST00000519921 CHD1O14646 1710 aa18.49■□□□□ 0.55
GPAT4-204ENST00000519921 GRIN2BQ13224 1484 aa18.48■□□□□ 0.55
GPAT4-204ENST00000519921 SNAPC4Q5SXM2 1469 aa18.48■□□□□ 0.55
GPAT4-204ENST00000519921 OSCARQ8IYS5 282 aa18.44■□□□□ 0.54
GPAT4-204ENST00000519921 MAGI1Q96QZ7 1491 aaPredicted RBP18.42■□□□□ 0.54
GPAT4-204ENST00000519921 FBLN2P98095 1184 aa18.42■□□□□ 0.54
GPAT4-204ENST00000519921 SYNJ2O15056 1496 aa18.35■□□□□ 0.53
GPAT4-204ENST00000519921 CHMP7Q8WUX9 453 aaPredicted RBP18.35■□□□□ 0.53
GPAT4-204ENST00000519921 ERICH3Q5RHP9 1530 aa18.34■□□□□ 0.53
GPAT4-204ENST00000519921 ADAMTS12P58397 1594 aa18.34■□□□□ 0.53
GPAT4-204ENST00000519921 KIF27Q86VH2 1401 aa18.31■□□□□ 0.52
GPAT4-204ENST00000519921 FHAD1B1AJZ9 1412 aa18.27■□□□□ 0.52
GPAT4-204ENST00000519921 GRIN2AQ12879 1464 aa18.26■□□□□ 0.51
GPAT4-204ENST00000519921 EEA1Q15075 1411 aa18.25■□□□□ 0.51
GPAT4-204ENST00000519921 IGF1RP08069 1367 aa18.24■□□□□ 0.51
GPAT4-204ENST00000519921 CLASP1Q7Z460 1538 aa18.23■□□□□ 0.51
GPAT4-204ENST00000519921 RUSC2Q8N2Y8 1516 aa18.23■□□□□ 0.51
GPAT4-204ENST00000519921 CUL7Q14999 1698 aa18.21■□□□□ 0.51
GPAT4-204ENST00000519921 RIMBP3CA6NJZ7 1639 aa18.2■□□□□ 0.5
GPAT4-204ENST00000519921 RIMBP3BA6NNM3 1639 aa18.2■□□□□ 0.5
GPAT4-204ENST00000519921 RIMBP3Q9UFD9 1639 aa18.2■□□□□ 0.5
GPAT4-204ENST00000519921 CEP170Q5SW79 1584 aa18.2■□□□□ 0.5
GPAT4-204ENST00000519921 ARHGEF11O15085 1522 aa18.18■□□□□ 0.5
GPAT4-204ENST00000519921 NUP160Q12769 1436 aa18.16■□□□□ 0.5
GPAT4-204ENST00000519921 CARMIL1Q5VZK9 1371 aa18.14■□□□□ 0.49
GPAT4-204ENST00000519921 FAM9AQ8IZU1 332 aaPredicted RBP18.1■□□□□ 0.49
GPAT4-204ENST00000519921 CSRNP3Q8WYN3 585 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms