RNA–Protein interactions for RNA: ENST00000519534.1

CHTF8-206, Transcript of chromosome transmission fidelity factor 8, human

TSL 2

Gene CHTF8, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHTF8-206	ENST00000519534	NISCH	Q9Y2I1	1504 aa		25.53	■■□□□ 1.68
CHTF8-206	ENST00000519534	CCDC180	Q9P1Z9	1646 aa		22.46	■■□□□ 1.19
CHTF8-206	ENST00000519534	AEBP2	Q6ZN18	517 aa	Predicted RBP	22.11	■■□□□ 1.13
CHTF8-206	ENST00000519534	ABCC9	O60706	1549 aa		21.65	■■□□□ 1.06
CHTF8-206	ENST00000519534	ZCCHC6	Q5VYS8	1495 aa	Known RBP	21.31	■■□□□ 1
CHTF8-206	ENST00000519534	MYO15B	Q96JP2	1530 aa		21.23	■□□□□ 0.99
CHTF8-206	ENST00000519534	DCAF1	Q9Y4B6	1507 aa		21.22	■□□□□ 0.99
CHTF8-206	ENST00000519534	DCAF8L2	P0C7V8	631 aa		21.18	■□□□□ 0.98
CHTF8-206	ENST00000519534	NACAD	O15069	1562 aa		21.15	■□□□□ 0.98
CHTF8-206	ENST00000519534	RB1CC1	Q8TDY2	1594 aa		21.03	■□□□□ 0.96
CHTF8-206	ENST00000519534	CHIC1	Q5VXU3	224 aa		20.65	■□□□□ 0.9
CHTF8-206	ENST00000519534	SCRIB	Q14160	1630 aa		20.42	■□□□□ 0.86
CHTF8-206	ENST00000519534	PABPN1	Q86U42	306 aa	Known RBP eCLIP	20.35	■□□□□ 0.85
CHTF8-206	ENST00000519534	BICRA	Q9NZM4	1560 aa		20.34	■□□□□ 0.85
CHTF8-206	ENST00000519534	SHROOM4	Q9ULL8	1493 aa		20.33	■□□□□ 0.85
CHTF8-206	ENST00000519534	UNC13A	Q9UPW8	1703 aa		20.33	■□□□□ 0.84
CHTF8-206	ENST00000519534	CECR2	Q9BXF3	1484 aa		19.79	■□□□□ 0.76
CHTF8-206	ENST00000519534	EIF4G1	Q04637	1599 aa	Known RBP	19.79	■□□□□ 0.76
CHTF8-206	ENST00000519534	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	19.75	■□□□□ 0.75
CHTF8-206	ENST00000519534	DNAJC5B	Q9UF47	199 aa		19.66	■□□□□ 0.74
CHTF8-206	ENST00000519534	SMARCA4	P51532	1647 aa		19.65	■□□□□ 0.74
CHTF8-206	ENST00000519534	MROH2B	Q7Z745	1585 aa		19.61	■□□□□ 0.73
CHTF8-206	ENST00000519534	RSF1	Q96T23	1441 aa	Predicted RBP	19.59	■□□□□ 0.73
CHTF8-206	ENST00000519534	CC2D2A	Q9P2K1	1620 aa		19.59	■□□□□ 0.73
CHTF8-206	ENST00000519534	NCAPD3	P42695	1498 aa		19.58	■□□□□ 0.72
CHTF8-206	ENST00000519534	ATAD2B	Q9ULI0	1458 aa		19.56	■□□□□ 0.72
CHTF8-206	ENST00000519534	PEG3	Q9GZU2	1588 aa		19.56	■□□□□ 0.72
CHTF8-206	ENST00000519534	SMARCA2	P51531	1590 aa		19.54	■□□□□ 0.72
CHTF8-206	ENST00000519534	HMGXB3	Q12766	1538 aa		19.41	■□□□□ 0.7
CHTF8-206	ENST00000519534	BAZ1B	Q9UIG0	1483 aa	Known RBP	19.37	■□□□□ 0.69
CHTF8-206	ENST00000519534	WIZ	O95785	1651 aa		19.33	■□□□□ 0.68
CHTF8-206	ENST00000519534	SUPT5H	O00267	1087 aa	Known RBP	19.29	■□□□□ 0.68
CHTF8-206	ENST00000519534	TOP2A	P11388	1531 aa	Known RBP	19.25	■□□□□ 0.67
CHTF8-206	ENST00000519534	CCDC88B	A6NC98	1476 aa		19.06	■□□□□ 0.64
CHTF8-206	ENST00000519534	CADPS	Q9ULU8	1353 aa		19.02	■□□□□ 0.64
CHTF8-206	ENST00000519534	CFTR	P13569	1480 aa		18.95	■□□□□ 0.62
CHTF8-206	ENST00000519534	LAMC3	Q9Y6N6	1575 aa		18.9	■□□□□ 0.62
CHTF8-206	ENST00000519534	SENP3	Q9H4L4	574 aa	Predicted RBP	18.9	■□□□□ 0.62
CHTF8-206	ENST00000519534	PDS5B	Q9NTI5	1447 aa		18.85	■□□□□ 0.61
CHTF8-206	ENST00000519534	NES	P48681	1621 aa		18.81	■□□□□ 0.6
CHTF8-206	ENST00000519534	FANCD2	Q9BXW9	1451 aa		18.71	■□□□□ 0.59
CHTF8-206	ENST00000519534	ERCC6	Q03468	1493 aa		18.67	■□□□□ 0.58
CHTF8-206	ENST00000519534	CEP164	Q9UPV0	1460 aa		18.64	■□□□□ 0.57
CHTF8-206	ENST00000519534	PHF23	Q9BUL5	403 aa	Predicted RBP	18.6	■□□□□ 0.57
CHTF8-206	ENST00000519534	ABCC8	Q09428	1581 aa		18.57	■□□□□ 0.56
CHTF8-206	ENST00000519534	PRDM2	Q13029	1718 aa		18.56	■□□□□ 0.56
CHTF8-206	ENST00000519534	MRC2	Q9UBG0	1479 aa		18.55	■□□□□ 0.56
CHTF8-206	ENST00000519534	KIF21A	Q7Z4S6	1674 aa		18.49	■□□□□ 0.55
CHTF8-206	ENST00000519534	WDR62	O43379	1518 aa		18.47	■□□□□ 0.55
CHTF8-206	ENST00000519534	WRN	Q14191	1432 aa	Predicted RBP eCLIP	18.46	■□□□□ 0.55
CHTF8-206	ENST00000519534	URB2	Q14146	1524 aa	Known RBP	18.45	■□□□□ 0.54
CHTF8-206	ENST00000519534	CUX2	O14529	1486 aa		18.44	■□□□□ 0.54
CHTF8-206	ENST00000519534	THOC2	Q8NI27	1593 aa	Known RBP	18.43	■□□□□ 0.54
CHTF8-206	ENST00000519534	TOPBP1	Q92547	1522 aa		18.43	■□□□□ 0.54
CHTF8-206	ENST00000519534	DNMBP	Q6XZF7	1577 aa		18.41	■□□□□ 0.54
CHTF8-206	ENST00000519534	CUX1	P39880	1505 aa		18.38	■□□□□ 0.53
CHTF8-206	ENST00000519534	TOP2B	Q02880	1626 aa		18.32	■□□□□ 0.52
CHTF8-206	ENST00000519534	TRIM41	Q8WV44	630 aa		18.3	■□□□□ 0.52
CHTF8-206	ENST00000519534	POLA1	P09884	1462 aa	Predicted RBP	18.3	■□□□□ 0.52
CHTF8-206	ENST00000519534	IFT140	Q96RY7	1462 aa		18.29	■□□□□ 0.52
CHTF8-206	ENST00000519534	SOGA1	O94964	1423 aa		18.29	■□□□□ 0.52
CHTF8-206	ENST00000519534	FGD5	Q6ZNL6	1462 aa		18.27	■□□□□ 0.52
CHTF8-206	ENST00000519534	BIVM-ERCC5	R4GMW8	1640 aa		18.27	■□□□□ 0.51
CHTF8-206	ENST00000519534	SYNJ1	O43426	1573 aa		18.25	■□□□□ 0.51
CHTF8-206	ENST00000519534	ABCA10	Q8WWZ4	1543 aa		18.18	■□□□□ 0.5
CHTF8-206	ENST00000519534	RAD54L2	Q9Y4B4	1467 aa		18.18	■□□□□ 0.5
CHTF8-206	ENST00000519534	TARBP1	Q13395	1621 aa	Known RBP	18.16	■□□□□ 0.5
CHTF8-206	ENST00000519534	WDR97	A6NE52	1622 aa		18.13	■□□□□ 0.49
CHTF8-206	ENST00000519534	TDRD9	Q8NDG6	1382 aa	Known RBP	18.1	■□□□□ 0.49
CHTF8-206	ENST00000519534	KIF27	Q86VH2	1401 aa		18.08	■□□□□ 0.49
CHTF8-206	ENST00000519534	ZNF608	Q9ULD9	1512 aa	Predicted RBP	18.08	■□□□□ 0.48
CHTF8-206	ENST00000519534	AQR	O60306	1485 aa	Known RBP eCLIP	18.07	■□□□□ 0.48
CHTF8-206	ENST00000519534	GAPVD1	Q14C86	1478 aa		18.06	■□□□□ 0.48
CHTF8-206	ENST00000519534	GRIN2B	Q13224	1484 aa		18.02	■□□□□ 0.48
CHTF8-206	ENST00000519534	EEA1	Q15075	1411 aa		18	■□□□□ 0.47
CHTF8-206	ENST00000519534	IGF1R	P08069	1367 aa		18	■□□□□ 0.47
CHTF8-206	ENST00000519534	ABCA5	Q8WWZ7	1642 aa		17.97	■□□□□ 0.47
CHTF8-206	ENST00000519534	ERICH3	Q5RHP9	1530 aa		17.97	■□□□□ 0.47
CHTF8-206	ENST00000519534	EIF4G3	O43432	1585 aa	Known RBP	17.96	■□□□□ 0.46
CHTF8-206	ENST00000519534	MAGI1	Q96QZ7	1491 aa	Predicted RBP	17.94	■□□□□ 0.46
CHTF8-206	ENST00000519534	CSRNP3	Q8WYN3	585 aa		17.93	■□□□□ 0.46
CHTF8-206	ENST00000519534	FHAD1	B1AJZ9	1412 aa		17.89	■□□□□ 0.46
CHTF8-206	ENST00000519534	RUSC2	Q8N2Y8	1516 aa		17.88	■□□□□ 0.45
CHTF8-206	ENST00000519534	CHMP7	Q8WUX9	453 aa	Predicted RBP	17.88	■□□□□ 0.45
CHTF8-206	ENST00000519534	CARMIL1	Q5VZK9	1371 aa		17.88	■□□□□ 0.45
CHTF8-206	ENST00000519534	SNAPC4	Q5SXM2	1469 aa		17.87	■□□□□ 0.45
CHTF8-206	ENST00000519534	SYNJ2	O15056	1496 aa		17.86	■□□□□ 0.45
CHTF8-206	ENST00000519534	OSCAR	Q8IYS5	282 aa		17.82	■□□□□ 0.44
CHTF8-206	ENST00000519534	PRX	Q9BXM0	1461 aa		17.82	■□□□□ 0.44
CHTF8-206	ENST00000519534	FBLN2	P98095	1184 aa		17.79	■□□□□ 0.44
CHTF8-206	ENST00000519534	PBRM1	Q86U86	1689 aa		17.79	■□□□□ 0.44
CHTF8-206	ENST00000519534	CUL7	Q14999	1698 aa		17.78	■□□□□ 0.44
CHTF8-206	ENST00000519534	RAPGEF2	Q9Y4G8	1499 aa		17.77	■□□□□ 0.44
CHTF8-206	ENST00000519534	FAM9A	Q8IZU1	332 aa	Predicted RBP	17.77	■□□□□ 0.44
CHTF8-206	ENST00000519534	ADAMTS12	P58397	1594 aa		17.76	■□□□□ 0.43
CHTF8-206	ENST00000519534	GRIN2A	Q12879	1464 aa		17.75	■□□□□ 0.43
CHTF8-206	ENST00000519534	NUP160	Q12769	1436 aa		17.71	■□□□□ 0.43
CHTF8-206	ENST00000519534	FOXD1	Q16676	465 aa		17.66	■□□□□ 0.42
CHTF8-206	ENST00000519534	KIAA0586	Q9BVV6	1533 aa		17.64	■□□□□ 0.41
CHTF8-206	ENST00000519534	KIF21B	O75037	1637 aa		17.64	■□□□□ 0.41

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