RNA–Protein interactions for RNA: ENST00000519020.5

FAM49B-210, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 5

Gene FAM49B, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-210ENST00000519020 NISCHQ9Y2I1 1504 aa39.59■■■■□ 3.93
FAM49B-210ENST00000519020 CCDC180Q9P1Z9 1646 aa35.52■■■■□ 3.28
FAM49B-210ENST00000519020 ABCC9O60706 1549 aa34.83■■■■□ 3.17
FAM49B-210ENST00000519020 RB1CC1Q8TDY2 1594 aa33.53■■■□□ 2.96
FAM49B-210ENST00000519020 NACADO15069 1562 aa33.41■■■□□ 2.94
FAM49B-210ENST00000519020 MYO15BQ96JP2 1530 aa33.14■■■□□ 2.9
FAM49B-210ENST00000519020 DCAF8L2P0C7V8 631 aa33.02■■■□□ 2.88
FAM49B-210ENST00000519020 ZCCHC6Q5VYS8 1495 aaKnown RBP32.92■■■□□ 2.86
FAM49B-210ENST00000519020 DCAF1Q9Y4B6 1507 aa32.84■■■□□ 2.85
FAM49B-210ENST00000519020 UNC13AQ9UPW8 1703 aa32.82■■■□□ 2.84
FAM49B-210ENST00000519020 BICRAQ9NZM4 1560 aa32.44■■■□□ 2.78
FAM49B-210ENST00000519020 PABPN1Q86U42 306 aaKnown RBP eCLIP32.39■■■□□ 2.78
FAM49B-210ENST00000519020 SHROOM4Q9ULL8 1493 aa32.24■■■□□ 2.75
FAM49B-210ENST00000519020 SCRIBQ14160 1630 aa32.19■■■□□ 2.74
FAM49B-210ENST00000519020 DNAJC5BQ9UF47 199 aa32.18■■■□□ 2.74
FAM49B-210ENST00000519020 EIF4G1Q04637 1599 aaKnown RBP31.64■■■□□ 2.65
FAM49B-210ENST00000519020 CC2D2AQ9P2K1 1620 aa31.6■■■□□ 2.65
FAM49B-210ENST00000519020 CECR2Q9BXF3 1484 aa31.4■■■□□ 2.62
FAM49B-210ENST00000519020 SMARCA4P51532 1647 aa30.83■■■□□ 2.53
FAM49B-210ENST00000519020 NCAPD3P42695 1498 aa30.76■■■□□ 2.52
FAM49B-210ENST00000519020 BAZ1AQ9NRL2 1556 aaPredicted RBP30.76■■■□□ 2.52
FAM49B-210ENST00000519020 SMARCA2P51531 1590 aa30.74■■■□□ 2.51
FAM49B-210ENST00000519020 ATAD2BQ9ULI0 1458 aa30.7■■■□□ 2.5
FAM49B-210ENST00000519020 HMGXB3Q12766 1538 aa30.65■■■□□ 2.5
FAM49B-210ENST00000519020 PEG3Q9GZU2 1588 aa30.59■■■□□ 2.49
FAM49B-210ENST00000519020 BAZ1BQ9UIG0 1483 aaKnown RBP30.44■■■□□ 2.46
FAM49B-210ENST00000519020 MROH2BQ7Z745 1585 aa30.44■■■□□ 2.46
FAM49B-210ENST00000519020 WIZO95785 1651 aa30.14■■■□□ 2.42
FAM49B-210ENST00000519020 ERCC6Q03468 1493 aa30.12■■■□□ 2.41
FAM49B-210ENST00000519020 LAMC3Q9Y6N6 1575 aa30.08■■■□□ 2.41
FAM49B-210ENST00000519020 NESP48681 1621 aa30.02■■■□□ 2.4
FAM49B-210ENST00000519020 CUX2O14529 1486 aa30.01■■■□□ 2.4
FAM49B-210ENST00000519020 RSF1Q96T23 1441 aaPredicted RBP29.95■■■□□ 2.38
FAM49B-210ENST00000519020 TOP2AP11388 1531 aaKnown RBP29.85■■■□□ 2.37
FAM49B-210ENST00000519020 PDS5BQ9NTI5 1447 aa29.83■■■□□ 2.37
FAM49B-210ENST00000519020 KIF21AQ7Z4S6 1674 aa29.82■■■□□ 2.36
FAM49B-210ENST00000519020 CADPSQ9ULU8 1353 aa29.81■■■□□ 2.36
FAM49B-210ENST00000519020 THOC2Q8NI27 1593 aaKnown RBP29.79■■■□□ 2.36
FAM49B-210ENST00000519020 CFTRP13569 1480 aa29.59■■■□□ 2.33
FAM49B-210ENST00000519020 PRDM2Q13029 1718 aa29.57■■■□□ 2.32
FAM49B-210ENST00000519020 MRC2Q9UBG0 1479 aa29.53■■■□□ 2.32
FAM49B-210ENST00000519020 CEP164Q9UPV0 1460 aa29.5■■■□□ 2.31
FAM49B-210ENST00000519020 WDR62O43379 1518 aa29.48■■■□□ 2.31
FAM49B-210ENST00000519020 FANCD2Q9BXW9 1451 aa29.48■■■□□ 2.31
FAM49B-210ENST00000519020 CCDC88BA6NC98 1476 aa29.41■■■□□ 2.3
FAM49B-210ENST00000519020 DNAJC5Q9H3Z4 198 aa29.38■■■□□ 2.29
FAM49B-210ENST00000519020 URB2Q14146 1524 aaKnown RBP29.18■■■□□ 2.26
FAM49B-210ENST00000519020 ABCC8Q09428 1581 aa29.05■■■□□ 2.24
FAM49B-210ENST00000519020 TOPBP1Q92547 1522 aa28.98■■■□□ 2.23
FAM49B-210ENST00000519020 DNMBPQ6XZF7 1577 aa28.96■■■□□ 2.23
FAM49B-210ENST00000519020 IFT140Q96RY7 1462 aa28.91■■■□□ 2.22
FAM49B-210ENST00000519020 SUPT5HO00267 1087 aaKnown RBP28.81■■■□□ 2.2
FAM49B-210ENST00000519020 TARBP1Q13395 1621 aaKnown RBP28.72■■■□□ 2.19
FAM49B-210ENST00000519020 ZNF608Q9ULD9 1512 aaPredicted RBP28.7■■■□□ 2.19
FAM49B-210ENST00000519020 EIF4G3O43432 1585 aaKnown RBP28.7■■■□□ 2.18
FAM49B-210ENST00000519020 POLA1P09884 1462 aaPredicted RBP28.69■■■□□ 2.18
FAM49B-210ENST00000519020 WDR97A6NE52 1622 aa28.62■■■□□ 2.17
FAM49B-210ENST00000519020 OSCARQ8IYS5 282 aa28.6■■■□□ 2.17
FAM49B-210ENST00000519020 CUX1P39880 1505 aa28.59■■■□□ 2.17
FAM49B-210ENST00000519020 FGD5Q6ZNL6 1462 aa28.57■■■□□ 2.16
FAM49B-210ENST00000519020 SOGA1O94964 1423 aa28.54■■■□□ 2.16
FAM49B-210ENST00000519020 RAD54L2Q9Y4B4 1467 aa28.5■■■□□ 2.15
FAM49B-210ENST00000519020 AQRO60306 1485 aaKnown RBP eCLIP28.49■■■□□ 2.15
FAM49B-210ENST00000519020 CHD1O14646 1710 aa28.44■■■□□ 2.14
FAM49B-210ENST00000519020 BIVM-ERCC5R4GMW8 1640 aa28.38■■■□□ 2.13
FAM49B-210ENST00000519020 TDRD9Q8NDG6 1382 aaKnown RBP28.36■■■□□ 2.13
FAM49B-210ENST00000519020 TOP2BQ02880 1626 aa28.34■■■□□ 2.13
FAM49B-210ENST00000519020 ABCA10Q8WWZ4 1543 aa28.33■■■□□ 2.13
FAM49B-210ENST00000519020 PBRM1Q86U86 1689 aa28.32■■■□□ 2.12
FAM49B-210ENST00000519020 GRIN2BQ13224 1484 aa28.31■■■□□ 2.12
FAM49B-210ENST00000519020 MAGI1Q96QZ7 1491 aaPredicted RBP28.31■■■□□ 2.12
FAM49B-210ENST00000519020 WRNQ14191 1432 aaPredicted RBP eCLIP28.29■■■□□ 2.12
FAM49B-210ENST00000519020 SNAPC4Q5SXM2 1469 aa28.27■■■□□ 2.12
FAM49B-210ENST00000519020 ABCA5Q8WWZ7 1642 aa28.27■■■□□ 2.12
FAM49B-210ENST00000519020 RIMBP3CA6NJZ7 1639 aa28.25■■■□□ 2.11
FAM49B-210ENST00000519020 RIMBP3BA6NNM3 1639 aa28.25■■■□□ 2.11
FAM49B-210ENST00000519020 RIMBP3Q9UFD9 1639 aa28.25■■■□□ 2.11
FAM49B-210ENST00000519020 GAPVD1Q14C86 1478 aa28.24■■■□□ 2.11
FAM49B-210ENST00000519020 SYNJ1O43426 1573 aa28.24■■■□□ 2.11
FAM49B-210ENST00000519020 FBLN2P98095 1184 aa28.18■■■□□ 2.1
FAM49B-210ENST00000519020 ARHGEF11O15085 1522 aa28.18■■■□□ 2.1
FAM49B-210ENST00000519020 SYNJ2O15056 1496 aa28.17■■■□□ 2.1
FAM49B-210ENST00000519020 TRIM41Q8WV44 630 aa28.17■■■□□ 2.1
FAM49B-210ENST00000519020 CHMP7Q8WUX9 453 aaPredicted RBP28.11■■■□□ 2.09
FAM49B-210ENST00000519020 CLASP1Q7Z460 1538 aa28.08■■■□□ 2.08
FAM49B-210ENST00000519020 ERICH3Q5RHP9 1530 aa28.02■■■□□ 2.08
FAM49B-210ENST00000519020 ADAMTS12P58397 1594 aa28.01■■■□□ 2.07
FAM49B-210ENST00000519020 GRIN2AQ12879 1464 aa27.94■■■□□ 2.06
FAM49B-210ENST00000519020 FHAD1B1AJZ9 1412 aa27.92■■■□□ 2.06
FAM49B-210ENST00000519020 ARAP1Q96P48 1450 aa27.89■■■□□ 2.06
FAM49B-210ENST00000519020 NUP160Q12769 1436 aa27.83■■■□□ 2.05
FAM49B-210ENST00000519020 CYB5RLQ6IPT4 315 aa27.82■■■□□ 2.04
FAM49B-210ENST00000519020 CEP170Q5SW79 1584 aa27.8■■■□□ 2.04
FAM49B-210ENST00000519020 KIF27Q86VH2 1401 aa27.75■■■□□ 2.03
FAM49B-210ENST00000519020 CUL7Q14999 1698 aa27.75■■■□□ 2.03
FAM49B-210ENST00000519020 SHROOM2Q13796 1616 aa27.74■■■□□ 2.03
FAM49B-210ENST00000519020 IGF1RP08069 1367 aa27.61■■■□□ 2.01
FAM49B-210ENST00000519020 RUSC2Q8N2Y8 1516 aa27.61■■■□□ 2.01
FAM49B-210ENST00000519020 ERCC6L2Q5T890 1561 aa27.56■■■□□ 2
FAM49B-210ENST00000519020 KIAA0586Q9BVV6 1533 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms