RNA–Protein interactions for RNA: ENST00000518910.5

CTNNA1-211, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-211ENST00000518910 NISCHQ9Y2I1 1504 aa29.4■■■□□ 2.3
CTNNA1-211ENST00000518910 CCDC180Q9P1Z9 1646 aa26.1■■□□□ 1.77
CTNNA1-211ENST00000518910 ABCC9O60706 1549 aa25.58■■□□□ 1.69
CTNNA1-211ENST00000518910 DCAF8L2P0C7V8 631 aa24.78■■□□□ 1.56
CTNNA1-211ENST00000518910 RB1CC1Q8TDY2 1594 aa24.52■■□□□ 1.52
CTNNA1-211ENST00000518910 ZCCHC6Q5VYS8 1495 aaKnown RBP24.51■■□□□ 1.51
CTNNA1-211ENST00000518910 NACADO15069 1562 aa24.45■■□□□ 1.5
CTNNA1-211ENST00000518910 UNC13AQ9UPW8 1703 aa24.19■■□□□ 1.46
CTNNA1-211ENST00000518910 DCAF1Q9Y4B6 1507 aa24.18■■□□□ 1.46
CTNNA1-211ENST00000518910 MYO15BQ96JP2 1530 aa24.16■■□□□ 1.46
CTNNA1-211ENST00000518910 SCRIBQ14160 1630 aa24.04■■□□□ 1.44
CTNNA1-211ENST00000518910 PABPN1Q86U42 306 aaKnown RBP eCLIP23.93■■□□□ 1.42
CTNNA1-211ENST00000518910 BICRAQ9NZM4 1560 aa23.79■■□□□ 1.4
CTNNA1-211ENST00000518910 SHROOM4Q9ULL8 1493 aa23.63■■□□□ 1.37
CTNNA1-211ENST00000518910 DNAJC5BQ9UF47 199 aa23.27■■□□□ 1.32
CTNNA1-211ENST00000518910 EIF4G1Q04637 1599 aaKnown RBP23.16■■□□□ 1.3
CTNNA1-211ENST00000518910 CC2D2AQ9P2K1 1620 aa23.1■■□□□ 1.29
CTNNA1-211ENST00000518910 CECR2Q9BXF3 1484 aa22.99■■□□□ 1.27
CTNNA1-211ENST00000518910 SMARCA4P51532 1647 aa22.87■■□□□ 1.25
CTNNA1-211ENST00000518910 BAZ1AQ9NRL2 1556 aaPredicted RBP22.79■■□□□ 1.24
CTNNA1-211ENST00000518910 MROH2BQ7Z745 1585 aa22.76■■□□□ 1.23
CTNNA1-211ENST00000518910 ATAD2BQ9ULI0 1458 aa22.63■■□□□ 1.21
CTNNA1-211ENST00000518910 WIZO95785 1651 aa22.62■■□□□ 1.21
CTNNA1-211ENST00000518910 SMARCA2P51531 1590 aa22.6■■□□□ 1.21
CTNNA1-211ENST00000518910 BAZ1BQ9UIG0 1483 aaKnown RBP22.52■■□□□ 1.2
CTNNA1-211ENST00000518910 NCAPD3P42695 1498 aa22.49■■□□□ 1.19
CTNNA1-211ENST00000518910 PEG3Q9GZU2 1588 aa22.47■■□□□ 1.19
CTNNA1-211ENST00000518910 RSF1Q96T23 1441 aaPredicted RBP22.46■■□□□ 1.19
CTNNA1-211ENST00000518910 HMGXB3Q12766 1538 aa22.46■■□□□ 1.19
CTNNA1-211ENST00000518910 TOP2AP11388 1531 aaKnown RBP22.25■■□□□ 1.15
CTNNA1-211ENST00000518910 SUPT5HO00267 1087 aaKnown RBP22.23■■□□□ 1.15
CTNNA1-211ENST00000518910 NESP48681 1621 aa22.17■■□□□ 1.14
CTNNA1-211ENST00000518910 ERCC6Q03468 1493 aa22.01■■□□□ 1.11
CTNNA1-211ENST00000518910 KIF21AQ7Z4S6 1674 aa21.99■■□□□ 1.11
CTNNA1-211ENST00000518910 CCDC88BA6NC98 1476 aa21.99■■□□□ 1.11
CTNNA1-211ENST00000518910 LAMC3Q9Y6N6 1575 aa21.98■■□□□ 1.11
CTNNA1-211ENST00000518910 CADPSQ9ULU8 1353 aa21.9■■□□□ 1.1
CTNNA1-211ENST00000518910 PRDM2Q13029 1718 aa21.87■■□□□ 1.09
CTNNA1-211ENST00000518910 CFTRP13569 1480 aa21.79■■□□□ 1.08
CTNNA1-211ENST00000518910 PDS5BQ9NTI5 1447 aa21.79■■□□□ 1.08
CTNNA1-211ENST00000518910 FANCD2Q9BXW9 1451 aa21.75■■□□□ 1.07
CTNNA1-211ENST00000518910 THOC2Q8NI27 1593 aaKnown RBP21.74■■□□□ 1.07
CTNNA1-211ENST00000518910 CEP164Q9UPV0 1460 aa21.72■■□□□ 1.07
CTNNA1-211ENST00000518910 MRC2Q9UBG0 1479 aa21.63■■□□□ 1.05
CTNNA1-211ENST00000518910 URB2Q14146 1524 aaKnown RBP21.55■■□□□ 1.04
CTNNA1-211ENST00000518910 CUX2O14529 1486 aa21.54■■□□□ 1.04
CTNNA1-211ENST00000518910 WDR62O43379 1518 aa21.52■■□□□ 1.04
CTNNA1-211ENST00000518910 TOPBP1Q92547 1522 aa21.42■■□□□ 1.02
CTNNA1-211ENST00000518910 DNMBPQ6XZF7 1577 aa21.4■■□□□ 1.02
CTNNA1-211ENST00000518910 ABCC8Q09428 1581 aa21.39■■□□□ 1.01
CTNNA1-211ENST00000518910 CUX1P39880 1505 aa21.34■■□□□ 1.01
CTNNA1-211ENST00000518910 SYNJ1O43426 1573 aa21.25■□□□□ 0.99
CTNNA1-211ENST00000518910 FGD5Q6ZNL6 1462 aa21.25■□□□□ 0.99
CTNNA1-211ENST00000518910 POLA1P09884 1462 aaPredicted RBP21.24■□□□□ 0.99
CTNNA1-211ENST00000518910 RAD54L2Q9Y4B4 1467 aa21.23■□□□□ 0.99
CTNNA1-211ENST00000518910 WRNQ14191 1432 aaPredicted RBP eCLIP21.21■□□□□ 0.99
CTNNA1-211ENST00000518910 ZNF608Q9ULD9 1512 aaPredicted RBP21.2■□□□□ 0.98
CTNNA1-211ENST00000518910 IFT140Q96RY7 1462 aa21.19■□□□□ 0.98
CTNNA1-211ENST00000518910 TARBP1Q13395 1621 aaKnown RBP21.18■□□□□ 0.98
CTNNA1-211ENST00000518910 BIVM-ERCC5R4GMW8 1640 aa21.18■□□□□ 0.98
CTNNA1-211ENST00000518910 TOP2BQ02880 1626 aa21.15■□□□□ 0.98
CTNNA1-211ENST00000518910 EIF4G3O43432 1585 aaKnown RBP21.15■□□□□ 0.98
CTNNA1-211ENST00000518910 SOGA1O94964 1423 aa21.14■□□□□ 0.98
CTNNA1-211ENST00000518910 WDR97A6NE52 1622 aa21.1■□□□□ 0.97
CTNNA1-211ENST00000518910 AQRO60306 1485 aaKnown RBP eCLIP21.09■□□□□ 0.973e-6■■■□□ 17.2
CTNNA1-211ENST00000518910 TDRD9Q8NDG6 1382 aaKnown RBP21.07■□□□□ 0.96
CTNNA1-211ENST00000518910 PBRM1Q86U86 1689 aa21.02■□□□□ 0.96
CTNNA1-211ENST00000518910 CHD1O14646 1710 aa20.96■□□□□ 0.95
CTNNA1-211ENST00000518910 ABCA10Q8WWZ4 1543 aa20.94■□□□□ 0.94
CTNNA1-211ENST00000518910 ABCA5Q8WWZ7 1642 aa20.93■□□□□ 0.94
CTNNA1-211ENST00000518910 FBLN2P98095 1184 aa20.91■□□□□ 0.94
CTNNA1-211ENST00000518910 GAPVD1Q14C86 1478 aa20.91■□□□□ 0.94
CTNNA1-211ENST00000518910 SNAPC4Q5SXM2 1469 aa20.9■□□□□ 0.94
CTNNA1-211ENST00000518910 TRIM41Q8WV44 630 aa20.86■□□□□ 0.93
CTNNA1-211ENST00000518910 GRIN2BQ13224 1484 aa20.85■□□□□ 0.93
CTNNA1-211ENST00000518910 MAGI1Q96QZ7 1491 aaPredicted RBP20.75■□□□□ 0.91
CTNNA1-211ENST00000518910 ADAMTS12P58397 1594 aa20.75■□□□□ 0.91
CTNNA1-211ENST00000518910 CHMP7Q8WUX9 453 aaPredicted RBP20.74■□□□□ 0.91
CTNNA1-211ENST00000518910 DNAJC5Q9H3Z4 198 aa20.73■□□□□ 0.91
CTNNA1-211ENST00000518910 RUSC2Q8N2Y8 1516 aa20.73■□□□□ 0.91
CTNNA1-211ENST00000518910 KIF27Q86VH2 1401 aa20.72■□□□□ 0.91
CTNNA1-211ENST00000518910 OSCARQ8IYS5 282 aa20.71■□□□□ 0.91
CTNNA1-211ENST00000518910 SYNJ2O15056 1496 aa20.69■□□□□ 0.9
CTNNA1-211ENST00000518910 ERICH3Q5RHP9 1530 aa20.69■□□□□ 0.9
CTNNA1-211ENST00000518910 CHIC1Q5VXU3 224 aa20.67■□□□□ 0.9
CTNNA1-211ENST00000518910 FAM9AQ8IZU1 332 aaPredicted RBP20.63■□□□□ 0.89
CTNNA1-211ENST00000518910 CUL7Q14999 1698 aa20.62■□□□□ 0.89
CTNNA1-211ENST00000518910 GRIN2AQ12879 1464 aa20.62■□□□□ 0.89
CTNNA1-211ENST00000518910 FHAD1B1AJZ9 1412 aa20.61■□□□□ 0.89
CTNNA1-211ENST00000518910 IGF1RP08069 1367 aa20.59■□□□□ 0.89
CTNNA1-211ENST00000518910 CEP170Q5SW79 1584 aa20.58■□□□□ 0.88
CTNNA1-211ENST00000518910 CLASP1Q7Z460 1538 aa20.53■□□□□ 0.88
CTNNA1-211ENST00000518910 RIMBP3CA6NJZ7 1639 aa20.53■□□□□ 0.88
CTNNA1-211ENST00000518910 RIMBP3BA6NNM3 1639 aa20.53■□□□□ 0.88
CTNNA1-211ENST00000518910 RIMBP3Q9UFD9 1639 aa20.53■□□□□ 0.88
CTNNA1-211ENST00000518910 CARMIL1Q5VZK9 1371 aa20.52■□□□□ 0.88
CTNNA1-211ENST00000518910 EHMT2Q96KQ7 1210 aa20.51■□□□□ 0.87
CTNNA1-211ENST00000518910 ARHGEF11O15085 1522 aa20.46■□□□□ 0.87
CTNNA1-211ENST00000518910 NUP160Q12769 1436 aa20.44■□□□□ 0.86
CTNNA1-211ENST00000518910 RAPGEF2Q9Y4G8 1499 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms