RNA–Protein interactions for RNA: ENST00000518776.1

PTDSS1-205, Transcript of phosphatidylserine synthase 1, humanhuman

TSL 3

Gene PTDSS1, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTDSS1-205ENST00000518776 NISCHQ9Y2I1 1504 aa22.06■■□□□ 1.12
PTDSS1-205ENST00000518776 ABCC9O60706 1549 aa19.75■□□□□ 0.75
PTDSS1-205ENST00000518776 CCDC180Q9P1Z9 1646 aa19.42■□□□□ 0.7
PTDSS1-205ENST00000518776 DNAJC5BQ9UF47 199 aa18.92■□□□□ 0.62
PTDSS1-205ENST00000518776 RB1CC1Q8TDY2 1594 aa18.59■□□□□ 0.57
PTDSS1-205ENST00000518776 ZCCHC6Q5VYS8 1495 aaKnown RBP18.47■□□□□ 0.55
PTDSS1-205ENST00000518776 PABPN1Q86U42 306 aaKnown RBP eCLIP18.36■□□□□ 0.53
PTDSS1-205ENST00000518776 NACADO15069 1562 aa18.34■□□□□ 0.53
PTDSS1-205ENST00000518776 DCAF1Q9Y4B6 1507 aa18.32■□□□□ 0.52
PTDSS1-205ENST00000518776 DCAF8L2P0C7V8 631 aa18.3■□□□□ 0.52
PTDSS1-205ENST00000518776 MYO15BQ96JP2 1530 aa18.23■□□□□ 0.51
PTDSS1-205ENST00000518776 BICRAQ9NZM4 1560 aa17.96■□□□□ 0.47
PTDSS1-205ENST00000518776 UNC13AQ9UPW8 1703 aa17.94■□□□□ 0.46
PTDSS1-205ENST00000518776 CECR2Q9BXF3 1484 aa17.87■□□□□ 0.45
PTDSS1-205ENST00000518776 DNAJC5Q9H3Z4 198 aa17.82■□□□□ 0.44
PTDSS1-205ENST00000518776 SHROOM4Q9ULL8 1493 aa17.81■□□□□ 0.44
PTDSS1-205ENST00000518776 CC2D2AQ9P2K1 1620 aa17.76■□□□□ 0.43
PTDSS1-205ENST00000518776 SCRIBQ14160 1630 aa17.72■□□□□ 0.43
PTDSS1-205ENST00000518776 EIF4G1Q04637 1599 aaKnown RBP17.62■□□□□ 0.41
PTDSS1-205ENST00000518776 CUX2O14529 1486 aa17.25■□□□□ 0.35
PTDSS1-205ENST00000518776 ERCC6Q03468 1493 aa17.17■□□□□ 0.34
PTDSS1-205ENST00000518776 BAZ1AQ9NRL2 1556 aaPredicted RBP17.11■□□□□ 0.33
PTDSS1-205ENST00000518776 SMARCA4P51532 1647 aa17■□□□□ 0.31
PTDSS1-205ENST00000518776 RSF1Q96T23 1441 aaPredicted RBP16.99■□□□□ 0.31
PTDSS1-205ENST00000518776 SUPT5HO00267 1087 aaKnown RBP16.99■□□□□ 0.31
PTDSS1-205ENST00000518776 MROH2BQ7Z745 1585 aa16.97■□□□□ 0.31
PTDSS1-205ENST00000518776 NCAPD3P42695 1498 aa16.96■□□□□ 0.31
PTDSS1-205ENST00000518776 TRIM41Q8WV44 630 aa16.87■□□□□ 0.29
PTDSS1-205ENST00000518776 SMARCA2P51531 1590 aa16.86■□□□□ 0.29
PTDSS1-205ENST00000518776 PEG3Q9GZU2 1588 aa16.84■□□□□ 0.29
PTDSS1-205ENST00000518776 ATAD2BQ9ULI0 1458 aa16.82■□□□□ 0.28
PTDSS1-205ENST00000518776 WIZO95785 1651 aa16.81■□□□□ 0.28
PTDSS1-205ENST00000518776 NESP48681 1621 aa16.78■□□□□ 0.28
PTDSS1-205ENST00000518776 HMGXB3Q12766 1538 aa16.75■□□□□ 0.27
PTDSS1-205ENST00000518776 TOP2AP11388 1531 aaKnown RBP16.72■□□□□ 0.27
PTDSS1-205ENST00000518776 BAZ1BQ9UIG0 1483 aaKnown RBP16.72■□□□□ 0.27
PTDSS1-205ENST00000518776 THOC2Q8NI27 1593 aaKnown RBP16.67■□□□□ 0.26
PTDSS1-205ENST00000518776 PDS5BQ9NTI5 1447 aa16.64■□□□□ 0.25
PTDSS1-205ENST00000518776 LAMC3Q9Y6N6 1575 aa16.63■□□□□ 0.25
PTDSS1-205ENST00000518776 CCDC88BA6NC98 1476 aa16.5■□□□□ 0.23
PTDSS1-205ENST00000518776 KIF21AQ7Z4S6 1674 aa16.47■□□□□ 0.23
PTDSS1-205ENST00000518776 OSCARQ8IYS5 282 aa16.47■□□□□ 0.23
PTDSS1-205ENST00000518776 MRC2Q9UBG0 1479 aa16.47■□□□□ 0.23
PTDSS1-205ENST00000518776 CADPSQ9ULU8 1353 aa16.45■□□□□ 0.22
PTDSS1-205ENST00000518776 WDR62O43379 1518 aa16.4■□□□□ 0.22
PTDSS1-205ENST00000518776 CEP164Q9UPV0 1460 aa16.31■□□□□ 0.2
PTDSS1-205ENST00000518776 CFTRP13569 1480 aa16.27■□□□□ 0.19
PTDSS1-205ENST00000518776 FANCD2Q9BXW9 1451 aa16.24■□□□□ 0.19
PTDSS1-205ENST00000518776 PRDM2Q13029 1718 aa16.19■□□□□ 0.18
PTDSS1-205ENST00000518776 RIMBP3CA6NJZ7 1639 aa16.14■□□□□ 0.17
PTDSS1-205ENST00000518776 RIMBP3BA6NNM3 1639 aa16.14■□□□□ 0.17
PTDSS1-205ENST00000518776 RIMBP3Q9UFD9 1639 aa16.14■□□□□ 0.17
PTDSS1-205ENST00000518776 CHIC1Q5VXU3 224 aa16.13■□□□□ 0.17
PTDSS1-205ENST00000518776 TRHP20396 242 aaPredicted RBP16.12■□□□□ 0.17
PTDSS1-205ENST00000518776 CYB5RLQ6IPT4 315 aa16.09■□□□□ 0.17
PTDSS1-205ENST00000518776 ARHGEF11O15085 1522 aa16.09■□□□□ 0.17
PTDSS1-205ENST00000518776 URB2Q14146 1524 aaKnown RBP16.09■□□□□ 0.17
PTDSS1-205ENST00000518776 WRNQ14191 1432 aaPredicted RBP eCLIP16.05■□□□□ 0.16
PTDSS1-205ENST00000518776 AEBP2Q6ZN18 517 aaPredicted RBP16.05■□□□□ 0.16
PTDSS1-205ENST00000518776 IFT140Q96RY7 1462 aa16.02■□□□□ 0.15
PTDSS1-205ENST00000518776 ABCC8Q09428 1581 aa16.01■□□□□ 0.15
PTDSS1-205ENST00000518776 ZNF608Q9ULD9 1512 aaPredicted RBP15.97■□□□□ 0.15
PTDSS1-205ENST00000518776 TOP2BQ02880 1626 aa15.94■□□□□ 0.14
PTDSS1-205ENST00000518776 BIVM-ERCC5R4GMW8 1640 aa15.92■□□□□ 0.14
PTDSS1-205ENST00000518776 FBLN2P98095 1184 aa15.91■□□□□ 0.14
PTDSS1-205ENST00000518776 SYNJ1O43426 1573 aa15.91■□□□□ 0.14
PTDSS1-205ENST00000518776 DNMBPQ6XZF7 1577 aa15.91■□□□□ 0.14
PTDSS1-205ENST00000518776 CUX1P39880 1505 aa15.9■□□□□ 0.14
PTDSS1-205ENST00000518776 ARAP1Q96P48 1450 aa15.88■□□□□ 0.13
PTDSS1-205ENST00000518776 TOPBP1Q92547 1522 aa15.86■□□□□ 0.13
PTDSS1-205ENST00000518776 EIF4G3O43432 1585 aaKnown RBP15.83■□□□□ 0.12
PTDSS1-205ENST00000518776 AQRO60306 1485 aaKnown RBP eCLIP15.8■□□□□ 0.128e-8■■■■■ 39.5
PTDSS1-205ENST00000518776 FGD5Q6ZNL6 1462 aa15.79■□□□□ 0.12
PTDSS1-205ENST00000518776 EEA1Q15075 1411 aa15.79■□□□□ 0.12
PTDSS1-205ENST00000518776 POLA1P09884 1462 aaPredicted RBP15.76■□□□□ 0.11
PTDSS1-205ENST00000518776 SOGA1O94964 1423 aa15.75■□□□□ 0.11
PTDSS1-205ENST00000518776 CHD1O14646 1710 aa15.74■□□□□ 0.11
PTDSS1-205ENST00000518776 KIF27Q86VH2 1401 aa15.72■□□□□ 0.11
PTDSS1-205ENST00000518776 CHMP7Q8WUX9 453 aaPredicted RBP15.71■□□□□ 0.11
PTDSS1-205ENST00000518776 ABCA10Q8WWZ4 1543 aa15.69■□□□□ 0.1
PTDSS1-205ENST00000518776 TARBP1Q13395 1621 aaKnown RBP15.68■□□□□ 0.1
PTDSS1-205ENST00000518776 FAM9AQ8IZU1 332 aaPredicted RBP15.67■□□□□ 0.1
PTDSS1-205ENST00000518776 RAD54L2Q9Y4B4 1467 aa15.65■□□□□ 0.1
PTDSS1-205ENST00000518776 TDRD9Q8NDG6 1382 aaKnown RBP15.65■□□□□ 0.1
PTDSS1-205ENST00000518776 CSRNP3Q8WYN3 585 aa15.65■□□□□ 0.1
PTDSS1-205ENST00000518776 WDR97A6NE52 1622 aa15.63■□□□□ 0.09
PTDSS1-205ENST00000518776 SNAPC4Q5SXM2 1469 aa15.62■□□□□ 0.09
PTDSS1-205ENST00000518776 CLASP1Q7Z460 1538 aa15.62■□□□□ 0.09
PTDSS1-205ENST00000518776 MAGI1Q96QZ7 1491 aaPredicted RBP15.59■□□□□ 0.09
PTDSS1-205ENST00000518776 RUSC2Q8N2Y8 1516 aa15.58■□□□□ 0.09
PTDSS1-205ENST00000518776 GAPVD1Q14C86 1478 aa15.57■□□□□ 0.08
PTDSS1-205ENST00000518776 GRIN2BQ13224 1484 aa15.55■□□□□ 0.08
PTDSS1-205ENST00000518776 ABCA5Q8WWZ7 1642 aa15.54■□□□□ 0.08
PTDSS1-205ENST00000518776 SYNJ2O15056 1496 aa15.54■□□□□ 0.08
PTDSS1-205ENST00000518776 ERICH3Q5RHP9 1530 aa15.53■□□□□ 0.08
PTDSS1-205ENST00000518776 IGF1RP08069 1367 aa15.53■□□□□ 0.08
PTDSS1-205ENST00000518776 KIF21BO75037 1637 aa15.5■□□□□ 0.07
PTDSS1-205ENST00000518776 CUL7Q14999 1698 aa15.5■□□□□ 0.07
PTDSS1-205ENST00000518776 GOLGA3Q08378 1498 aa15.49■□□□□ 0.07
PTDSS1-205ENST00000518776 CARMIL1Q5VZK9 1371 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 607.8 ms