RNA–Protein interactions for RNA: ENST00000518310.5

TCEA1-203, Transcript of transcription elongation factor A1, humanhuman

TSL 4

Gene TCEA1, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA1-203ENST00000518310 NISCHQ9Y2I1 1504 aa52.31■■■■■ 5.96
TCEA1-203ENST00000518310 CCDC180Q9P1Z9 1646 aa47.24■■■■■ 5.15
TCEA1-203ENST00000518310 ABCC9O60706 1549 aa47.03■■■■■ 5.12
TCEA1-203ENST00000518310 RB1CC1Q8TDY2 1594 aa44.9■■■■■ 4.78
TCEA1-203ENST00000518310 NACADO15069 1562 aa44.57■■■■■ 4.73
TCEA1-203ENST00000518310 DNAJC5BQ9UF47 199 aa44.15■■■■■ 4.66
TCEA1-203ENST00000518310 UNC13AQ9UPW8 1703 aa44.06■■■■■ 4.64
TCEA1-203ENST00000518310 MYO15BQ96JP2 1530 aa43.99■■■■■ 4.63
TCEA1-203ENST00000518310 DCAF8L2P0C7V8 631 aa43.82■■■■■ 4.61
TCEA1-203ENST00000518310 PABPN1Q86U42 306 aaKnown RBP eCLIP43.6■■■■■ 4.57
TCEA1-203ENST00000518310 BICRAQ9NZM4 1560 aa43.59■■■■■ 4.57
TCEA1-203ENST00000518310 ZCCHC6Q5VYS8 1495 aaKnown RBP43.36■■■■■ 4.53
TCEA1-203ENST00000518310 DCAF1Q9Y4B6 1507 aa43.33■■■■■ 4.53
TCEA1-203ENST00000518310 SHROOM4Q9ULL8 1493 aa43.12■■■■■ 4.49
TCEA1-203ENST00000518310 SCRIBQ14160 1630 aa42.79■■■■■ 4.44
TCEA1-203ENST00000518310 CC2D2AQ9P2K1 1620 aa42.63■■■■■ 4.41
TCEA1-203ENST00000518310 EIF4G1Q04637 1599 aaKnown RBP42.52■■■■■ 4.4
TCEA1-203ENST00000518310 CECR2Q9BXF3 1484 aa42.43■■■■■ 4.38
TCEA1-203ENST00000518310 NCAPD3P42695 1498 aa41.07■■■■■ 4.16
TCEA1-203ENST00000518310 SMARCA4P51532 1647 aa40.91■■■■■ 4.14
TCEA1-203ENST00000518310 ATAD2BQ9ULI0 1458 aa40.89■■■■■ 4.14
TCEA1-203ENST00000518310 SMARCA2P51531 1590 aa40.86■■■■■ 4.13
TCEA1-203ENST00000518310 HMGXB3Q12766 1538 aa40.85■■■■■ 4.13
TCEA1-203ENST00000518310 CUX2O14529 1486 aa40.77■■■■■ 4.12
TCEA1-203ENST00000518310 DNAJC5Q9H3Z4 198 aa40.74■■■■■ 4.11
TCEA1-203ENST00000518310 BAZ1AQ9NRL2 1556 aaPredicted RBP40.66■■■■■ 4.1
TCEA1-203ENST00000518310 ERCC6Q03468 1493 aa40.64■■■■■ 4.1
TCEA1-203ENST00000518310 PEG3Q9GZU2 1588 aa40.59■■■■■ 4.09
TCEA1-203ENST00000518310 BAZ1BQ9UIG0 1483 aaKnown RBP40.48■■■■■ 4.07
TCEA1-203ENST00000518310 NESP48681 1621 aa40.37■■■■■ 4.05
TCEA1-203ENST00000518310 LAMC3Q9Y6N6 1575 aa40.27■■■■■ 4.04
TCEA1-203ENST00000518310 MROH2BQ7Z745 1585 aa40.25■■■■■ 4.03
TCEA1-203ENST00000518310 THOC2Q8NI27 1593 aaKnown RBP40.2■■■■■ 4.03
TCEA1-203ENST00000518310 KIF21AQ7Z4S6 1674 aa40.06■■■■■ 4
TCEA1-203ENST00000518310 PDS5BQ9NTI5 1447 aa39.9■■■■□ 3.98
TCEA1-203ENST00000518310 WIZO95785 1651 aa39.82■■■■□ 3.96
TCEA1-203ENST00000518310 CADPSQ9ULU8 1353 aa39.73■■■■□ 3.95
TCEA1-203ENST00000518310 MRC2Q9UBG0 1479 aa39.6■■■■□ 3.93
TCEA1-203ENST00000518310 WDR62O43379 1518 aa39.59■■■■□ 3.93
TCEA1-203ENST00000518310 CEP164Q9UPV0 1460 aa39.4■■■■□ 3.9
TCEA1-203ENST00000518310 TOP2AP11388 1531 aaKnown RBP39.34■■■■□ 3.89
TCEA1-203ENST00000518310 RSF1Q96T23 1441 aaPredicted RBP39.33■■■■□ 3.89
TCEA1-203ENST00000518310 CFTRP13569 1480 aa39.32■■■■□ 3.89
TCEA1-203ENST00000518310 FANCD2Q9BXW9 1451 aa39.31■■■■□ 3.88
TCEA1-203ENST00000518310 PRDM2Q13029 1718 aa39.24■■■■□ 3.87
TCEA1-203ENST00000518310 URB2Q14146 1524 aaKnown RBP39.02■■■■□ 3.84
TCEA1-203ENST00000518310 CCDC88BA6NC98 1476 aa38.78■■■■□ 3.8
TCEA1-203ENST00000518310 TRIM41Q8WV44 630 aa38.73■■■■□ 3.79
TCEA1-203ENST00000518310 OSCARQ8IYS5 282 aa38.67■■■■□ 3.78
TCEA1-203ENST00000518310 IFT140Q96RY7 1462 aa38.62■■■■□ 3.77
TCEA1-203ENST00000518310 TOPBP1Q92547 1522 aa38.58■■■■□ 3.77
TCEA1-203ENST00000518310 ABCC8Q09428 1581 aa38.56■■■■□ 3.76
TCEA1-203ENST00000518310 DNMBPQ6XZF7 1577 aa38.5■■■■□ 3.75
TCEA1-203ENST00000518310 ZNF608Q9ULD9 1512 aaPredicted RBP38.5■■■■□ 3.75
TCEA1-203ENST00000518310 EIF4G3O43432 1585 aaKnown RBP38.44■■■■□ 3.74
TCEA1-203ENST00000518310 RIMBP3CA6NJZ7 1639 aa38.38■■■■□ 3.74
TCEA1-203ENST00000518310 RIMBP3BA6NNM3 1639 aa38.38■■■■□ 3.74
TCEA1-203ENST00000518310 RIMBP3Q9UFD9 1639 aa38.38■■■■□ 3.74
TCEA1-203ENST00000518310 TARBP1Q13395 1621 aaKnown RBP38.34■■■■□ 3.73
TCEA1-203ENST00000518310 CHD1O14646 1710 aa38.24■■■■□ 3.71
TCEA1-203ENST00000518310 ARHGEF11O15085 1522 aa38.2■■■■□ 3.71
TCEA1-203ENST00000518310 POLA1P09884 1462 aaPredicted RBP38.16■■■■□ 3.7
TCEA1-203ENST00000518310 AQRO60306 1485 aaKnown RBP eCLIP38.09■■■■□ 3.694e-8■■□□□ 13.7
TCEA1-203ENST00000518310 WDR97A6NE52 1622 aa38.07■■■■□ 3.68
TCEA1-203ENST00000518310 RAD54L2Q9Y4B4 1467 aa37.93■■■■□ 3.66
TCEA1-203ENST00000518310 SOGA1O94964 1423 aa37.9■■■■□ 3.66
TCEA1-203ENST00000518310 FGD5Q6ZNL6 1462 aa37.89■■■■□ 3.66
TCEA1-203ENST00000518310 CUX1P39880 1505 aa37.86■■■■□ 3.65
TCEA1-203ENST00000518310 TDRD9Q8NDG6 1382 aaKnown RBP37.79■■■■□ 3.64
TCEA1-203ENST00000518310 ARAP1Q96P48 1450 aa37.78■■■■□ 3.64
TCEA1-203ENST00000518310 SNAPC4Q5SXM2 1469 aa37.77■■■■□ 3.64
TCEA1-203ENST00000518310 MAGI1Q96QZ7 1491 aaPredicted RBP37.76■■■■□ 3.63
TCEA1-203ENST00000518310 CLASP1Q7Z460 1538 aa37.74■■■■□ 3.63
TCEA1-203ENST00000518310 FBLN2P98095 1184 aa37.72■■■■□ 3.63
TCEA1-203ENST00000518310 CYB5RLQ6IPT4 315 aa37.7■■■■□ 3.63
TCEA1-203ENST00000518310 PBRM1Q86U86 1689 aa37.69■■■■□ 3.62
TCEA1-203ENST00000518310 SYNJ1O43426 1573 aa37.69■■■■□ 3.62
TCEA1-203ENST00000518310 GRIN2BQ13224 1484 aa37.67■■■■□ 3.62
TCEA1-203ENST00000518310 SUPT5HO00267 1087 aaKnown RBP37.63■■■■□ 3.61
TCEA1-203ENST00000518310 SYNJ2O15056 1496 aa37.59■■■■□ 3.61
TCEA1-203ENST00000518310 ABCA5Q8WWZ7 1642 aa37.55■■■■□ 3.6
TCEA1-203ENST00000518310 CHMP7Q8WUX9 453 aaPredicted RBP37.51■■■■□ 3.6
TCEA1-203ENST00000518310 GAPVD1Q14C86 1478 aa37.51■■■■□ 3.59
TCEA1-203ENST00000518310 ABCA10Q8WWZ4 1543 aa37.51■■■■□ 3.59
TCEA1-203ENST00000518310 BIVM-ERCC5R4GMW8 1640 aa37.36■■■■□ 3.57
TCEA1-203ENST00000518310 TRHP20396 242 aaPredicted RBP37.3■■■■□ 3.56
TCEA1-203ENST00000518310 TOP2BQ02880 1626 aa37.29■■■■□ 3.56
TCEA1-203ENST00000518310 ADAMTS12P58397 1594 aa37.25■■■■□ 3.55
TCEA1-203ENST00000518310 WRNQ14191 1432 aaPredicted RBP eCLIP37.24■■■■□ 3.55
TCEA1-203ENST00000518310 GRIN2AQ12879 1464 aa37.2■■■■□ 3.55
TCEA1-203ENST00000518310 CEP170Q5SW79 1584 aa37.11■■■■□ 3.53
TCEA1-203ENST00000518310 NUP160Q12769 1436 aa37.1■■■■□ 3.53
TCEA1-203ENST00000518310 SHROOM2Q13796 1616 aa37.08■■■■□ 3.53
TCEA1-203ENST00000518310 ERICH3Q5RHP9 1530 aa37.08■■■■□ 3.53
TCEA1-203ENST00000518310 ERCC6L2Q5T890 1561 aa37.03■■■■□ 3.52
TCEA1-203ENST00000518310 FHAD1B1AJZ9 1412 aa37.02■■■■□ 3.52
TCEA1-203ENST00000518310 RUSC2Q8N2Y8 1516 aa36.75■■■■□ 3.47
TCEA1-203ENST00000518310 KIF13AQ9H1H9 1805 aa36.71■■■■□ 3.47
TCEA1-203ENST00000518310 PRG4Q92954 1404 aaPredicted RBP36.65■■■■□ 3.46
TCEA1-203ENST00000518310 CUL7Q14999 1698 aa36.58■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms