RNA–Protein interactions for RNA: ENST00000517962.1

SORBS3-204, Transcript of sorbin and SH3 domain containing 3, humanhuman

TSL 2

Gene SORBS3, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORBS3-204ENST00000517962 NISCHQ9Y2I1 1504 aa27.89■■■□□ 2.06
SORBS3-204ENST00000517962 CCDC180Q9P1Z9 1646 aa24.68■■□□□ 1.54
SORBS3-204ENST00000517962 ZCCHC6Q5VYS8 1495 aaKnown RBP23.34■■□□□ 1.33
SORBS3-204ENST00000517962 DCAF1Q9Y4B6 1507 aa23.27■■□□□ 1.32
SORBS3-204ENST00000517962 ABCC9O60706 1549 aa23.25■■□□□ 1.31
SORBS3-204ENST00000517962 MYO15BQ96JP2 1530 aa23.18■■□□□ 1.3
SORBS3-204ENST00000517962 NACADO15069 1562 aa23.04■■□□□ 1.28
SORBS3-204ENST00000517962 DCAF8L2P0C7V8 631 aa22.88■■□□□ 1.25
SORBS3-204ENST00000517962 RB1CC1Q8TDY2 1594 aa22.88■■□□□ 1.25
SORBS3-204ENST00000517962 UNC13AQ9UPW8 1703 aa22.34■■□□□ 1.17
SORBS3-204ENST00000517962 DNAJC5BQ9UF47 199 aa22.33■■□□□ 1.17
SORBS3-204ENST00000517962 SCRIBQ14160 1630 aa22.3■■□□□ 1.16
SORBS3-204ENST00000517962 SHROOM4Q9ULL8 1493 aa22.11■■□□□ 1.13
SORBS3-204ENST00000517962 BICRAQ9NZM4 1560 aa22.04■■□□□ 1.12
SORBS3-204ENST00000517962 PABPN1Q86U42 306 aaKnown RBP eCLIP21.77■■□□□ 1.085e-7■■■□□ 17
SORBS3-204ENST00000517962 BAZ1AQ9NRL2 1556 aaPredicted RBP21.64■■□□□ 1.05
SORBS3-204ENST00000517962 SMARCA4P51532 1647 aa21.51■■□□□ 1.03
SORBS3-204ENST00000517962 CECR2Q9BXF3 1484 aa21.5■■□□□ 1.03
SORBS3-204ENST00000517962 EIF4G1Q04637 1599 aaKnown RBP21.44■■□□□ 1.02
SORBS3-204ENST00000517962 RSF1Q96T23 1441 aaPredicted RBP21.42■■□□□ 1.02
SORBS3-204ENST00000517962 MROH2BQ7Z745 1585 aa21.4■■□□□ 1.02
SORBS3-204ENST00000517962 PEG3Q9GZU2 1588 aa21.4■■□□□ 1.02
SORBS3-204ENST00000517962 SMARCA2P51531 1590 aa21.34■■□□□ 1.01
SORBS3-204ENST00000517962 WIZO95785 1651 aa21.23■□□□□ 0.99
SORBS3-204ENST00000517962 ATAD2BQ9ULI0 1458 aa21.2■□□□□ 0.98
SORBS3-204ENST00000517962 SUPT5HO00267 1087 aaKnown RBP21.2■□□□□ 0.98
SORBS3-204ENST00000517962 NCAPD3P42695 1498 aa21.2■□□□□ 0.98
SORBS3-204ENST00000517962 CC2D2AQ9P2K1 1620 aa21.18■□□□□ 0.98
SORBS3-204ENST00000517962 DNAJC5Q9H3Z4 198 aa21.17■□□□□ 0.98
SORBS3-204ENST00000517962 HMGXB3Q12766 1538 aa21.16■□□□□ 0.98
SORBS3-204ENST00000517962 TOP2AP11388 1531 aaKnown RBP21.11■□□□□ 0.97
SORBS3-204ENST00000517962 BAZ1BQ9UIG0 1483 aaKnown RBP21.08■□□□□ 0.97
SORBS3-204ENST00000517962 CCDC88BA6NC98 1476 aa20.8■□□□□ 0.92
SORBS3-204ENST00000517962 PRDM2Q13029 1718 aa20.64■□□□□ 0.9
SORBS3-204ENST00000517962 CFTRP13569 1480 aa20.58■□□□□ 0.89
SORBS3-204ENST00000517962 LAMC3Q9Y6N6 1575 aa20.58■□□□□ 0.88
SORBS3-204ENST00000517962 CADPSQ9ULU8 1353 aa20.56■□□□□ 0.88
SORBS3-204ENST00000517962 PDS5BQ9NTI5 1447 aa20.39■□□□□ 0.85
SORBS3-204ENST00000517962 FANCD2Q9BXW9 1451 aa20.28■□□□□ 0.84
SORBS3-204ENST00000517962 ABCC8Q09428 1581 aa20.28■□□□□ 0.84
SORBS3-204ENST00000517962 NESP48681 1621 aa20.27■□□□□ 0.84
SORBS3-204ENST00000517962 CUX2O14529 1486 aa20.24■□□□□ 0.83
SORBS3-204ENST00000517962 CEP164Q9UPV0 1460 aa20.24■□□□□ 0.83
SORBS3-204ENST00000517962 CHIC1Q5VXU3 224 aa20.23■□□□□ 0.83
SORBS3-204ENST00000517962 WRNQ14191 1432 aaPredicted RBP eCLIP20.21■□□□□ 0.83
SORBS3-204ENST00000517962 KIF21AQ7Z4S6 1674 aa20.19■□□□□ 0.82
SORBS3-204ENST00000517962 BIVM-ERCC5R4GMW8 1640 aa20.17■□□□□ 0.82
SORBS3-204ENST00000517962 TOP2BQ02880 1626 aa20.16■□□□□ 0.82
SORBS3-204ENST00000517962 TRIM41Q8WV44 630 aa20.15■□□□□ 0.82
SORBS3-204ENST00000517962 DNMBPQ6XZF7 1577 aa20.12■□□□□ 0.81
SORBS3-204ENST00000517962 ERCC6Q03468 1493 aa20.09■□□□□ 0.81
SORBS3-204ENST00000517962 MRC2Q9UBG0 1479 aa20.07■□□□□ 0.8
SORBS3-204ENST00000517962 CUX1P39880 1505 aa20.06■□□□□ 0.8
SORBS3-204ENST00000517962 SYNJ1O43426 1573 aa20.05■□□□□ 0.8
SORBS3-204ENST00000517962 TOPBP1Q92547 1522 aa20.02■□□□□ 0.8
SORBS3-204ENST00000517962 WDR62O43379 1518 aa20■□□□□ 0.79
SORBS3-204ENST00000517962 URB2Q14146 1524 aaKnown RBP19.98■□□□□ 0.79
SORBS3-204ENST00000517962 THOC2Q8NI27 1593 aaKnown RBP19.96■□□□□ 0.79
SORBS3-204ENST00000517962 EEA1Q15075 1411 aa19.93■□□□□ 0.78
SORBS3-204ENST00000517962 FGD5Q6ZNL6 1462 aa19.91■□□□□ 0.78
SORBS3-204ENST00000517962 WDR97A6NE52 1622 aa19.87■□□□□ 0.77
SORBS3-204ENST00000517962 POLA1P09884 1462 aaPredicted RBP19.87■□□□□ 0.77
SORBS3-204ENST00000517962 SOGA1O94964 1423 aa19.85■□□□□ 0.77
SORBS3-204ENST00000517962 ABCA10Q8WWZ4 1543 aa19.83■□□□□ 0.77
SORBS3-204ENST00000517962 IFT140Q96RY7 1462 aa19.81■□□□□ 0.76
SORBS3-204ENST00000517962 KIF27Q86VH2 1401 aa19.8■□□□□ 0.76
SORBS3-204ENST00000517962 TARBP1Q13395 1621 aaKnown RBP19.8■□□□□ 0.76
SORBS3-204ENST00000517962 RAD54L2Q9Y4B4 1467 aa19.69■□□□□ 0.74
SORBS3-204ENST00000517962 CSRNP3Q8WYN3 585 aa19.68■□□□□ 0.74
SORBS3-204ENST00000517962 ABCA5Q8WWZ7 1642 aa19.68■□□□□ 0.74
SORBS3-204ENST00000517962 ERICH3Q5RHP9 1530 aa19.66■□□□□ 0.74
SORBS3-204ENST00000517962 GAPVD1Q14C86 1478 aa19.64■□□□□ 0.73
SORBS3-204ENST00000517962 CUL7Q14999 1698 aa19.62■□□□□ 0.73
SORBS3-204ENST00000517962 PBRM1Q86U86 1689 aa19.59■□□□□ 0.73
SORBS3-204ENST00000517962 KIF21BO75037 1637 aa19.59■□□□□ 0.73
SORBS3-204ENST00000517962 RUSC2Q8N2Y8 1516 aa19.58■□□□□ 0.73
SORBS3-204ENST00000517962 IGF1RP08069 1367 aa19.57■□□□□ 0.72
SORBS3-204ENST00000517962 GRIN2BQ13224 1484 aa19.57■□□□□ 0.72
SORBS3-204ENST00000517962 TDRD9Q8NDG6 1382 aaKnown RBP19.56■□□□□ 0.72
SORBS3-204ENST00000517962 EIF4G3O43432 1585 aaKnown RBP19.55■□□□□ 0.72
SORBS3-204ENST00000517962 PRXQ9BXM0 1461 aa19.53■□□□□ 0.72
SORBS3-204ENST00000517962 MAGI1Q96QZ7 1491 aaPredicted RBP19.5■□□□□ 0.71
SORBS3-204ENST00000517962 FAM9AQ8IZU1 332 aaPredicted RBP19.5■□□□□ 0.71
SORBS3-204ENST00000517962 ZNF608Q9ULD9 1512 aaPredicted RBP19.5■□□□□ 0.71
SORBS3-204ENST00000517962 AQRO60306 1485 aaKnown RBP eCLIP19.49■□□□□ 0.71
SORBS3-204ENST00000517962 CARMIL1Q5VZK9 1371 aa19.49■□□□□ 0.71
SORBS3-204ENST00000517962 GOLGA3Q08378 1498 aa19.48■□□□□ 0.71
SORBS3-204ENST00000517962 RAPGEF2Q9Y4G8 1499 aa19.48■□□□□ 0.71
SORBS3-204ENST00000517962 FHAD1B1AJZ9 1412 aa19.46■□□□□ 0.71
SORBS3-204ENST00000517962 ADAMTS12P58397 1594 aa19.4■□□□□ 0.7
SORBS3-204ENST00000517962 SYNJ2O15056 1496 aa19.38■□□□□ 0.69
SORBS3-204ENST00000517962 TNIKQ9UKE5 1360 aa19.37■□□□□ 0.69
SORBS3-204ENST00000517962 SNAPC4Q5SXM2 1469 aa19.35■□□□□ 0.69
SORBS3-204ENST00000517962 CTTNBP2Q8WZ74 1663 aa19.33■□□□□ 0.68
SORBS3-204ENST00000517962 UBTFP17480 764 aaKnown RBP19.32■□□□□ 0.68
SORBS3-204ENST00000517962 CHMP7Q8WUX9 453 aaPredicted RBP19.29■□□□□ 0.68
SORBS3-204ENST00000517962 GRIN2AQ12879 1464 aa19.28■□□□□ 0.68
SORBS3-204ENST00000517962 LOC105371045A0A1W2PR82 267 aa19.28■□□□□ 0.68
SORBS3-204ENST00000517962 CHD1O14646 1710 aa19.23■□□□□ 0.67
SORBS3-204ENST00000517962 KIAA0586Q9BVV6 1533 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms