RNA–Protein interactions for RNA: ENST00000517857.1

TOP1MT-203, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 2

Gene TOP1MT, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-203ENST00000517857 NISCHQ9Y2I1 1504 aa35.24■■■■□ 3.23
TOP1MT-203ENST00000517857 CCDC180Q9P1Z9 1646 aa31.39■■■□□ 2.62
TOP1MT-203ENST00000517857 ABCC9O60706 1549 aa30.63■■■□□ 2.49
TOP1MT-203ENST00000517857 RB1CC1Q8TDY2 1594 aa29.5■■■□□ 2.31
TOP1MT-203ENST00000517857 DCAF8L2P0C7V8 631 aa29.45■■■□□ 2.31
TOP1MT-203ENST00000517857 NACADO15069 1562 aa29.44■■■□□ 2.3
TOP1MT-203ENST00000517857 ZCCHC6Q5VYS8 1495 aaKnown RBP29.39■■■□□ 2.3
TOP1MT-203ENST00000517857 MYO15BQ96JP2 1530 aa29.22■■■□□ 2.27
TOP1MT-203ENST00000517857 DCAF1Q9Y4B6 1507 aa29.14■■■□□ 2.25
TOP1MT-203ENST00000517857 UNC13AQ9UPW8 1703 aa28.89■■■□□ 2.21
TOP1MT-203ENST00000517857 SCRIBQ14160 1630 aa28.67■■■□□ 2.18
TOP1MT-203ENST00000517857 PABPN1Q86U42 306 aaKnown RBP eCLIP28.58■■■□□ 2.17
TOP1MT-203ENST00000517857 BICRAQ9NZM4 1560 aa28.56■■■□□ 2.16
TOP1MT-203ENST00000517857 SHROOM4Q9ULL8 1493 aa28.26■■■□□ 2.11
TOP1MT-203ENST00000517857 DNAJC5BQ9UF47 199 aa27.93■■■□□ 2.06
TOP1MT-203ENST00000517857 EIF4G1Q04637 1599 aaKnown RBP27.83■■■□□ 2.05
TOP1MT-203ENST00000517857 CC2D2AQ9P2K1 1620 aa27.71■■■□□ 2.03
TOP1MT-203ENST00000517857 CECR2Q9BXF3 1484 aa27.5■■□□□ 1.99
TOP1MT-203ENST00000517857 SMARCA4P51532 1647 aa27.39■■□□□ 1.98
TOP1MT-203ENST00000517857 BAZ1AQ9NRL2 1556 aaPredicted RBP27.35■■□□□ 1.97
TOP1MT-203ENST00000517857 SMARCA2P51531 1590 aa27.18■■□□□ 1.94
TOP1MT-203ENST00000517857 MROH2BQ7Z745 1585 aa27.18■■□□□ 1.94
TOP1MT-203ENST00000517857 ATAD2BQ9ULI0 1458 aa27.16■■□□□ 1.94
TOP1MT-203ENST00000517857 NCAPD3P42695 1498 aa27.1■■□□□ 1.93
TOP1MT-203ENST00000517857 PEG3Q9GZU2 1588 aa27.06■■□□□ 1.92
TOP1MT-203ENST00000517857 HMGXB3Q12766 1538 aa27.05■■□□□ 1.92
TOP1MT-203ENST00000517857 BAZ1BQ9UIG0 1483 aaKnown RBP27■■□□□ 1.91
TOP1MT-203ENST00000517857 WIZO95785 1651 aa26.94■■□□□ 1.9
TOP1MT-203ENST00000517857 RSF1Q96T23 1441 aaPredicted RBP26.84■■□□□ 1.89
TOP1MT-203ENST00000517857 TOP2AP11388 1531 aaKnown RBP26.64■■□□□ 1.85
TOP1MT-203ENST00000517857 NESP48681 1621 aa26.5■■□□□ 1.83
TOP1MT-203ENST00000517857 LAMC3Q9Y6N6 1575 aa26.46■■□□□ 1.83
TOP1MT-203ENST00000517857 ERCC6Q03468 1493 aa26.43■■□□□ 1.82
TOP1MT-203ENST00000517857 CADPSQ9ULU8 1353 aa26.33■■□□□ 1.8
TOP1MT-203ENST00000517857 KIF21AQ7Z4S6 1674 aa26.28■■□□□ 1.8
TOP1MT-203ENST00000517857 CCDC88BA6NC98 1476 aa26.27■■□□□ 1.8
TOP1MT-203ENST00000517857 SUPT5HO00267 1087 aaKnown RBP26.26■■□□□ 1.79
TOP1MT-203ENST00000517857 PDS5BQ9NTI5 1447 aa26.25■■□□□ 1.79
TOP1MT-203ENST00000517857 CFTRP13569 1480 aa26.19■■□□□ 1.78
TOP1MT-203ENST00000517857 PRDM2Q13029 1718 aa26.17■■□□□ 1.78
TOP1MT-203ENST00000517857 THOC2Q8NI27 1593 aaKnown RBP26.13■■□□□ 1.77
TOP1MT-203ENST00000517857 FANCD2Q9BXW9 1451 aa26.09■■□□□ 1.77
TOP1MT-203ENST00000517857 CUX2O14529 1486 aa26.07■■□□□ 1.76
TOP1MT-203ENST00000517857 CEP164Q9UPV0 1460 aa26.07■■□□□ 1.76
TOP1MT-203ENST00000517857 MRC2Q9UBG0 1479 aa26.01■■□□□ 1.75
TOP1MT-203ENST00000517857 WDR62O43379 1518 aa25.92■■□□□ 1.74
TOP1MT-203ENST00000517857 URB2Q14146 1524 aaKnown RBP25.81■■□□□ 1.72
TOP1MT-203ENST00000517857 DNMBPQ6XZF7 1577 aa25.68■■□□□ 1.7
TOP1MT-203ENST00000517857 TOPBP1Q92547 1522 aa25.68■■□□□ 1.7
TOP1MT-203ENST00000517857 ABCC8Q09428 1581 aa25.65■■□□□ 1.7
TOP1MT-203ENST00000517857 CUX1P39880 1505 aa25.5■■□□□ 1.67
TOP1MT-203ENST00000517857 IFT140Q96RY7 1462 aa25.49■■□□□ 1.67
TOP1MT-203ENST00000517857 POLA1P09884 1462 aaPredicted RBP25.46■■□□□ 1.67
TOP1MT-203ENST00000517857 FGD5Q6ZNL6 1462 aa25.42■■□□□ 1.66
TOP1MT-203ENST00000517857 TARBP1Q13395 1621 aaKnown RBP25.39■■□□□ 1.66
TOP1MT-203ENST00000517857 ZNF608Q9ULD9 1512 aaPredicted RBP25.37■■□□□ 1.65
TOP1MT-203ENST00000517857 WRNQ14191 1432 aaPredicted RBP eCLIP25.36■■□□□ 1.65
TOP1MT-203ENST00000517857 EIF4G3O43432 1585 aaKnown RBP25.35■■□□□ 1.65
TOP1MT-203ENST00000517857 RAD54L2Q9Y4B4 1467 aa25.34■■□□□ 1.65
TOP1MT-203ENST00000517857 BIVM-ERCC5R4GMW8 1640 aa25.34■■□□□ 1.65
TOP1MT-203ENST00000517857 SOGA1O94964 1423 aa25.33■■□□□ 1.65
TOP1MT-203ENST00000517857 SYNJ1O43426 1573 aa25.32■■□□□ 1.64
TOP1MT-203ENST00000517857 TOP2BQ02880 1626 aa25.31■■□□□ 1.64
TOP1MT-203ENST00000517857 WDR97A6NE52 1622 aa25.26■■□□□ 1.63
TOP1MT-203ENST00000517857 AQRO60306 1485 aaKnown RBP eCLIP25.21■■□□□ 1.635e-15■■■■■ 69.3
TOP1MT-203ENST00000517857 TDRD9Q8NDG6 1382 aaKnown RBP25.18■■□□□ 1.62
TOP1MT-203ENST00000517857 ABCA10Q8WWZ4 1543 aa25.15■■□□□ 1.62
TOP1MT-203ENST00000517857 DNAJC5Q9H3Z4 198 aa25.12■■□□□ 1.61
TOP1MT-203ENST00000517857 PBRM1Q86U86 1689 aa25.11■■□□□ 1.61
TOP1MT-203ENST00000517857 ABCA5Q8WWZ7 1642 aa25.09■■□□□ 1.61
TOP1MT-203ENST00000517857 GAPVD1Q14C86 1478 aa25.06■■□□□ 1.6
TOP1MT-203ENST00000517857 GRIN2BQ13224 1484 aa25.05■■□□□ 1.6
TOP1MT-203ENST00000517857 CHD1O14646 1710 aa25.05■■□□□ 1.6
TOP1MT-203ENST00000517857 SNAPC4Q5SXM2 1469 aa25.04■■□□□ 1.6
TOP1MT-203ENST00000517857 MAGI1Q96QZ7 1491 aaPredicted RBP24.98■■□□□ 1.59
TOP1MT-203ENST00000517857 FBLN2P98095 1184 aa24.95■■□□□ 1.58
TOP1MT-203ENST00000517857 OSCARQ8IYS5 282 aa24.95■■□□□ 1.58
TOP1MT-203ENST00000517857 SYNJ2O15056 1496 aa24.88■■□□□ 1.57
TOP1MT-203ENST00000517857 ERICH3Q5RHP9 1530 aa24.86■■□□□ 1.57
TOP1MT-203ENST00000517857 ADAMTS12P58397 1594 aa24.86■■□□□ 1.57
TOP1MT-203ENST00000517857 CHMP7Q8WUX9 453 aaPredicted RBP24.85■■□□□ 1.57
TOP1MT-203ENST00000517857 KIF27Q86VH2 1401 aa24.82■■□□□ 1.56
TOP1MT-203ENST00000517857 TRIM41Q8WV44 630 aa24.78■■□□□ 1.56
TOP1MT-203ENST00000517857 FHAD1B1AJZ9 1412 aa24.76■■□□□ 1.55
TOP1MT-203ENST00000517857 GRIN2AQ12879 1464 aa24.74■■□□□ 1.55
TOP1MT-203ENST00000517857 CUL7Q14999 1698 aa24.71■■□□□ 1.55
TOP1MT-203ENST00000517857 CLASP1Q7Z460 1538 aa24.69■■□□□ 1.54
TOP1MT-203ENST00000517857 RIMBP3CA6NJZ7 1639 aa24.65■■□□□ 1.54
TOP1MT-203ENST00000517857 RIMBP3BA6NNM3 1639 aa24.65■■□□□ 1.54
TOP1MT-203ENST00000517857 RIMBP3Q9UFD9 1639 aa24.65■■□□□ 1.54
TOP1MT-203ENST00000517857 IGF1RP08069 1367 aa24.64■■□□□ 1.53
TOP1MT-203ENST00000517857 CEP170Q5SW79 1584 aa24.63■■□□□ 1.53
TOP1MT-203ENST00000517857 ARHGEF11O15085 1522 aa24.62■■□□□ 1.53
TOP1MT-203ENST00000517857 RUSC2Q8N2Y8 1516 aa24.59■■□□□ 1.53
TOP1MT-203ENST00000517857 NUP160Q12769 1436 aa24.59■■□□□ 1.53
TOP1MT-203ENST00000517857 CARMIL1Q5VZK9 1371 aa24.54■■□□□ 1.52
TOP1MT-203ENST00000517857 CHIC1Q5VXU3 224 aa24.47■■□□□ 1.51
TOP1MT-203ENST00000517857 SHROOM2Q13796 1616 aa24.44■■□□□ 1.5
TOP1MT-203ENST00000517857 RAPGEF2Q9Y4G8 1499 aa24.43■■□□□ 1.5
TOP1MT-203ENST00000517857 ARAP1Q96P48 1450 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms