RNA–Protein interactions for RNA: ENST00000517709.1

MCM4-202, Transcript of minichromosome maintenance complex component 4, humanhuman

TSL 2

Gene MCM4, Length 842 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-202ENST00000517709 NISCHQ9Y2I1 1504 aa29.65■■■□□ 2.34
MCM4-202ENST00000517709 CCDC180Q9P1Z9 1646 aa26.56■■□□□ 1.84
MCM4-202ENST00000517709 ABCC9O60706 1549 aa26.12■■□□□ 1.77
MCM4-202ENST00000517709 RB1CC1Q8TDY2 1594 aa24.99■■□□□ 1.59
MCM4-202ENST00000517709 NACADO15069 1562 aa24.88■■□□□ 1.57
MCM4-202ENST00000517709 UNC13AQ9UPW8 1703 aa24.72■■□□□ 1.55
MCM4-202ENST00000517709 ZCCHC6Q5VYS8 1495 aaKnown RBP24.7■■□□□ 1.55
MCM4-202ENST00000517709 MYO15BQ96JP2 1530 aa24.64■■□□□ 1.53
MCM4-202ENST00000517709 DCAF8L2P0C7V8 631 aa24.62■■□□□ 1.53
MCM4-202ENST00000517709 DCAF1Q9Y4B6 1507 aa24.48■■□□□ 1.51
MCM4-202ENST00000517709 BICRAQ9NZM4 1560 aa24.4■■□□□ 1.5
MCM4-202ENST00000517709 PABPN1Q86U42 306 aaKnown RBP eCLIP24.27■■□□□ 1.48
MCM4-202ENST00000517709 SCRIBQ14160 1630 aa24.24■■□□□ 1.47
MCM4-202ENST00000517709 DNAJC5BQ9UF47 199 aa24.14■■□□□ 1.45
MCM4-202ENST00000517709 SHROOM4Q9ULL8 1493 aa23.92■■□□□ 1.42
MCM4-202ENST00000517709 EIF4G1Q04637 1599 aaKnown RBP23.7■■□□□ 1.38
MCM4-202ENST00000517709 CC2D2AQ9P2K1 1620 aa23.68■■□□□ 1.38
MCM4-202ENST00000517709 CECR2Q9BXF3 1484 aa23.44■■□□□ 1.34
MCM4-202ENST00000517709 SMARCA4P51532 1647 aa23.14■■□□□ 1.29
MCM4-202ENST00000517709 BAZ1AQ9NRL2 1556 aaPredicted RBP22.97■■□□□ 1.27
MCM4-202ENST00000517709 ATAD2BQ9ULI0 1458 aa22.97■■□□□ 1.27
MCM4-202ENST00000517709 NCAPD3P42695 1498 aa22.92■■□□□ 1.26
MCM4-202ENST00000517709 SMARCA2P51531 1590 aa22.91■■□□□ 1.26
MCM4-202ENST00000517709 MROH2BQ7Z745 1585 aa22.9■■□□□ 1.26
MCM4-202ENST00000517709 HMGXB3Q12766 1538 aa22.9■■□□□ 1.26
MCM4-202ENST00000517709 PEG3Q9GZU2 1588 aa22.87■■□□□ 1.25
MCM4-202ENST00000517709 BAZ1BQ9UIG0 1483 aaKnown RBP22.75■■□□□ 1.23
MCM4-202ENST00000517709 WIZO95785 1651 aa22.71■■□□□ 1.23
MCM4-202ENST00000517709 NESP48681 1621 aa22.6■■□□□ 1.21
MCM4-202ENST00000517709 RSF1Q96T23 1441 aaPredicted RBP22.47■■□□□ 1.19
MCM4-202ENST00000517709 ERCC6Q03468 1493 aa22.44■■□□□ 1.18
MCM4-202ENST00000517709 KIF21AQ7Z4S6 1674 aa22.44■■□□□ 1.18
MCM4-202ENST00000517709 LAMC3Q9Y6N6 1575 aa22.43■■□□□ 1.18
MCM4-202ENST00000517709 THOC2Q8NI27 1593 aaKnown RBP22.39■■□□□ 1.18
MCM4-202ENST00000517709 TOP2AP11388 1531 aaKnown RBP22.37■■□□□ 1.17
MCM4-202ENST00000517709 CUX2O14529 1486 aa22.3■■□□□ 1.16
MCM4-202ENST00000517709 CADPSQ9ULU8 1353 aa22.21■■□□□ 1.15
MCM4-202ENST00000517709 PRDM2Q13029 1718 aa22.17■■□□□ 1.14
MCM4-202ENST00000517709 PDS5BQ9NTI5 1447 aa22.14■■□□□ 1.14
MCM4-202ENST00000517709 CFTRP13569 1480 aa22.1■■□□□ 1.13
MCM4-202ENST00000517709 WDR62O43379 1518 aa22.06■■□□□ 1.12
MCM4-202ENST00000517709 CCDC88BA6NC98 1476 aa22.06■■□□□ 1.12
MCM4-202ENST00000517709 MRC2Q9UBG0 1479 aa22.06■■□□□ 1.12
MCM4-202ENST00000517709 FANCD2Q9BXW9 1451 aa22.03■■□□□ 1.12
MCM4-202ENST00000517709 CEP164Q9UPV0 1460 aa22.03■■□□□ 1.12
MCM4-202ENST00000517709 URB2Q14146 1524 aaKnown RBP21.92■■□□□ 1.1
MCM4-202ENST00000517709 DNAJC5Q9H3Z4 198 aa21.77■■□□□ 1.08
MCM4-202ENST00000517709 TOPBP1Q92547 1522 aa21.7■■□□□ 1.07
MCM4-202ENST00000517709 DNMBPQ6XZF7 1577 aa21.68■■□□□ 1.06
MCM4-202ENST00000517709 SUPT5HO00267 1087 aaKnown RBP21.6■■□□□ 1.05
MCM4-202ENST00000517709 ZNF608Q9ULD9 1512 aaPredicted RBP21.59■■□□□ 1.05
MCM4-202ENST00000517709 TARBP1Q13395 1621 aaKnown RBP21.57■■□□□ 1.04
MCM4-202ENST00000517709 EIF4G3O43432 1585 aaKnown RBP21.57■■□□□ 1.04
MCM4-202ENST00000517709 IFT140Q96RY7 1462 aa21.54■■□□□ 1.04
MCM4-202ENST00000517709 ABCC8Q09428 1581 aa21.52■■□□□ 1.04
MCM4-202ENST00000517709 CUX1P39880 1505 aa21.51■■□□□ 1.03
MCM4-202ENST00000517709 POLA1P09884 1462 aaPredicted RBP21.51■■□□□ 1.03
MCM4-202ENST00000517709 WDR97A6NE52 1622 aa21.44■■□□□ 1.02
MCM4-202ENST00000517709 FGD5Q6ZNL6 1462 aa21.43■■□□□ 1.02
MCM4-202ENST00000517709 RAD54L2Q9Y4B4 1467 aa21.42■■□□□ 1.02
MCM4-202ENST00000517709 CHD1O14646 1710 aa21.39■■□□□ 1.01
MCM4-202ENST00000517709 AQRO60306 1485 aaKnown RBP eCLIP21.35■■□□□ 1.012e-10■■■■■ 36.8
MCM4-202ENST00000517709 BIVM-ERCC5R4GMW8 1640 aa21.31■■□□□ 1
MCM4-202ENST00000517709 SYNJ1O43426 1573 aa21.31■■□□□ 1
MCM4-202ENST00000517709 PBRM1Q86U86 1689 aa21.29■■□□□ 1
MCM4-202ENST00000517709 SOGA1O94964 1423 aa21.29■■□□□ 1
MCM4-202ENST00000517709 TOP2BQ02880 1626 aa21.24■□□□□ 0.99
MCM4-202ENST00000517709 ABCA5Q8WWZ7 1642 aa21.24■□□□□ 0.99
MCM4-202ENST00000517709 TDRD9Q8NDG6 1382 aaKnown RBP21.23■□□□□ 0.99
MCM4-202ENST00000517709 SNAPC4Q5SXM2 1469 aa21.2■□□□□ 0.98
MCM4-202ENST00000517709 RIMBP3CA6NJZ7 1639 aa21.18■□□□□ 0.98
MCM4-202ENST00000517709 RIMBP3BA6NNM3 1639 aa21.18■□□□□ 0.98
MCM4-202ENST00000517709 RIMBP3Q9UFD9 1639 aa21.18■□□□□ 0.98
MCM4-202ENST00000517709 ABCA10Q8WWZ4 1543 aa21.17■□□□□ 0.98
MCM4-202ENST00000517709 OSCARQ8IYS5 282 aa21.16■□□□□ 0.98
MCM4-202ENST00000517709 WRNQ14191 1432 aaPredicted RBP eCLIP21.15■□□□□ 0.98
MCM4-202ENST00000517709 GRIN2BQ13224 1484 aa21.1■□□□□ 0.97
MCM4-202ENST00000517709 GAPVD1Q14C86 1478 aa21.09■□□□□ 0.97
MCM4-202ENST00000517709 MAGI1Q96QZ7 1491 aaPredicted RBP21.09■□□□□ 0.97
MCM4-202ENST00000517709 ARHGEF11O15085 1522 aa21.08■□□□□ 0.96
MCM4-202ENST00000517709 CLASP1Q7Z460 1538 aa21.06■□□□□ 0.96
MCM4-202ENST00000517709 ADAMTS12P58397 1594 aa21.05■□□□□ 0.96
MCM4-202ENST00000517709 SYNJ2O15056 1496 aa21.01■□□□□ 0.95
MCM4-202ENST00000517709 TRIM41Q8WV44 630 aa21■□□□□ 0.95
MCM4-202ENST00000517709 FBLN2P98095 1184 aa20.98■□□□□ 0.95
MCM4-202ENST00000517709 ARAP1Q96P48 1450 aa20.92■□□□□ 0.94
MCM4-202ENST00000517709 CEP170Q5SW79 1584 aa20.91■□□□□ 0.94
MCM4-202ENST00000517709 ERICH3Q5RHP9 1530 aa20.9■□□□□ 0.94
MCM4-202ENST00000517709 GRIN2AQ12879 1464 aa20.89■□□□□ 0.94
MCM4-202ENST00000517709 CHMP7Q8WUX9 453 aaPredicted RBP20.86■□□□□ 0.93
MCM4-202ENST00000517709 ERCC6L2Q5T890 1561 aa20.81■□□□□ 0.92
MCM4-202ENST00000517709 FHAD1B1AJZ9 1412 aa20.8■□□□□ 0.92
MCM4-202ENST00000517709 NUP160Q12769 1436 aa20.8■□□□□ 0.92
MCM4-202ENST00000517709 SHROOM2Q13796 1616 aa20.78■□□□□ 0.92
MCM4-202ENST00000517709 RUSC2Q8N2Y8 1516 aa20.76■□□□□ 0.91
MCM4-202ENST00000517709 CUL7Q14999 1698 aa20.74■□□□□ 0.91
MCM4-202ENST00000517709 CYB5RLQ6IPT4 315 aa20.69■□□□□ 0.9
MCM4-202ENST00000517709 KIF27Q86VH2 1401 aa20.67■□□□□ 0.9
MCM4-202ENST00000517709 IGF1RP08069 1367 aa20.63■□□□□ 0.89
MCM4-202ENST00000517709 PRG4Q92954 1404 aaPredicted RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms