RNA–Protein interactions for RNA: ENST00000517453.5

PTK2-205, Transcript of protein tyrosine kinase 2, humanhuman

TSL 4

Gene PTK2, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-205ENST00000517453 NISCHQ9Y2I1 1504 aa19.22■□□□□ 0.67
PTK2-205ENST00000517453 CCDC180Q9P1Z9 1646 aa17.32■□□□□ 0.36
PTK2-205ENST00000517453 ABCC9O60706 1549 aa17.21■□□□□ 0.34
PTK2-205ENST00000517453 RB1CC1Q8TDY2 1594 aa16.43■□□□□ 0.22
PTK2-205ENST00000517453 NACADO15069 1562 aa16.34■□□□□ 0.21
PTK2-205ENST00000517453 DNAJC5BQ9UF47 199 aa16.22■□□□□ 0.19
PTK2-205ENST00000517453 UNC13AQ9UPW8 1703 aa16.16■□□□□ 0.18
PTK2-205ENST00000517453 MYO15BQ96JP2 1530 aa16.14■□□□□ 0.18
PTK2-205ENST00000517453 DCAF8L2P0C7V8 631 aa16.05■□□□□ 0.16
PTK2-205ENST00000517453 BICRAQ9NZM4 1560 aa16.01■□□□□ 0.15
PTK2-205ENST00000517453 PABPN1Q86U42 306 aaKnown RBP eCLIP15.98■□□□□ 0.15
PTK2-205ENST00000517453 DCAF1Q9Y4B6 1507 aa15.93■□□□□ 0.14
PTK2-205ENST00000517453 ZCCHC6Q5VYS8 1495 aaKnown RBP15.92■□□□□ 0.14
PTK2-205ENST00000517453 SHROOM4Q9ULL8 1493 aa15.77■□□□□ 0.11
PTK2-205ENST00000517453 AEBP2Q6ZN18 517 aaPredicted RBP15.7■□□□□ 0.1
PTK2-205ENST00000517453 SCRIBQ14160 1630 aa15.68■□□□□ 0.1
PTK2-205ENST00000517453 CC2D2AQ9P2K1 1620 aa15.61■□□□□ 0.09
PTK2-205ENST00000517453 EIF4G1Q04637 1599 aaKnown RBP15.57■□□□□ 0.08
PTK2-205ENST00000517453 CECR2Q9BXF3 1484 aa15.52■□□□□ 0.07
PTK2-205ENST00000517453 NCAPD3P42695 1498 aa15.08■□□□□ 0
PTK2-205ENST00000517453 SMARCA4P51532 1647 aa15□□□□□ -0.01
PTK2-205ENST00000517453 ATAD2BQ9ULI0 1458 aa15□□□□□ -0.01
PTK2-205ENST00000517453 HMGXB3Q12766 1538 aa14.97□□□□□ -0.01
PTK2-205ENST00000517453 SMARCA2P51531 1590 aa14.96□□□□□ -0.01
PTK2-205ENST00000517453 PEG3Q9GZU2 1588 aa14.9□□□□□ -0.02
PTK2-205ENST00000517453 BAZ1AQ9NRL2 1556 aaPredicted RBP14.9□□□□□ -0.02
PTK2-205ENST00000517453 DNAJC5Q9H3Z4 198 aa14.9□□□□□ -0.02
PTK2-205ENST00000517453 CUX2O14529 1486 aa14.89□□□□□ -0.03
PTK2-205ENST00000517453 ERCC6Q03468 1493 aa14.82□□□□□ -0.04
PTK2-205ENST00000517453 BAZ1BQ9UIG0 1483 aaKnown RBP14.82□□□□□ -0.04
PTK2-205ENST00000517453 NESP48681 1621 aa14.81□□□□□ -0.04
PTK2-205ENST00000517453 MROH2BQ7Z745 1585 aa14.8□□□□□ -0.04
PTK2-205ENST00000517453 LAMC3Q9Y6N6 1575 aa14.74□□□□□ -0.05
PTK2-205ENST00000517453 CHIC1Q5VXU3 224 aa14.74□□□□□ -0.05
PTK2-205ENST00000517453 THOC2Q8NI27 1593 aaKnown RBP14.72□□□□□ -0.05
PTK2-205ENST00000517453 KIF21AQ7Z4S6 1674 aa14.67□□□□□ -0.06
PTK2-205ENST00000517453 WIZO95785 1651 aa14.64□□□□□ -0.07
PTK2-205ENST00000517453 PDS5BQ9NTI5 1447 aa14.6□□□□□ -0.07
PTK2-205ENST00000517453 CADPSQ9ULU8 1353 aa14.58□□□□□ -0.08
PTK2-205ENST00000517453 WDR62O43379 1518 aa14.49□□□□□ -0.09
PTK2-205ENST00000517453 MRC2Q9UBG0 1479 aa14.49□□□□□ -0.09
PTK2-205ENST00000517453 RSF1Q96T23 1441 aaPredicted RBP14.47□□□□□ -0.09
PTK2-205ENST00000517453 CFTRP13569 1480 aa14.44□□□□□ -0.1
PTK2-205ENST00000517453 TOP2AP11388 1531 aaKnown RBP14.43□□□□□ -0.1
PTK2-205ENST00000517453 CEP164Q9UPV0 1460 aa14.41□□□□□ -0.1
PTK2-205ENST00000517453 FANCD2Q9BXW9 1451 aa14.39□□□□□ -0.11
PTK2-205ENST00000517453 PRDM2Q13029 1718 aa14.38□□□□□ -0.11
PTK2-205ENST00000517453 URB2Q14146 1524 aaKnown RBP14.31□□□□□ -0.12
PTK2-205ENST00000517453 CCDC88BA6NC98 1476 aa14.26□□□□□ -0.13
PTK2-205ENST00000517453 OSCARQ8IYS5 282 aa14.16□□□□□ -0.14
PTK2-205ENST00000517453 TOPBP1Q92547 1522 aa14.15□□□□□ -0.14
PTK2-205ENST00000517453 IFT140Q96RY7 1462 aa14.14□□□□□ -0.15
PTK2-205ENST00000517453 ABCC8Q09428 1581 aa14.13□□□□□ -0.15
PTK2-205ENST00000517453 ZNF608Q9ULD9 1512 aaPredicted RBP14.12□□□□□ -0.15
PTK2-205ENST00000517453 TRIM41Q8WV44 630 aa14.11□□□□□ -0.15
PTK2-205ENST00000517453 DNMBPQ6XZF7 1577 aa14.1□□□□□ -0.15
PTK2-205ENST00000517453 TARBP1Q13395 1621 aaKnown RBP14.08□□□□□ -0.16
PTK2-205ENST00000517453 EIF4G3O43432 1585 aaKnown RBP14.06□□□□□ -0.16
PTK2-205ENST00000517453 RIMBP3CA6NJZ7 1639 aa14.04□□□□□ -0.16
PTK2-205ENST00000517453 RIMBP3BA6NNM3 1639 aa14.04□□□□□ -0.16
PTK2-205ENST00000517453 RIMBP3Q9UFD9 1639 aa14.04□□□□□ -0.16
PTK2-205ENST00000517453 CHD1O14646 1710 aa14□□□□□ -0.17
PTK2-205ENST00000517453 POLA1P09884 1462 aaPredicted RBP13.99□□□□□ -0.17
PTK2-205ENST00000517453 AQRO60306 1485 aaKnown RBP eCLIP13.97□□□□□ -0.173e-6■■■■□ 24.7
PTK2-205ENST00000517453 ARHGEF11O15085 1522 aa13.96□□□□□ -0.17
PTK2-205ENST00000517453 WDR97A6NE52 1622 aa13.93□□□□□ -0.18
PTK2-205ENST00000517453 RAD54L2Q9Y4B4 1467 aa13.93□□□□□ -0.18
PTK2-205ENST00000517453 SOGA1O94964 1423 aa13.91□□□□□ -0.18
PTK2-205ENST00000517453 CUX1P39880 1505 aa13.9□□□□□ -0.18
PTK2-205ENST00000517453 FGD5Q6ZNL6 1462 aa13.89□□□□□ -0.19
PTK2-205ENST00000517453 TDRD9Q8NDG6 1382 aaKnown RBP13.85□□□□□ -0.19
PTK2-205ENST00000517453 ARAP1Q96P48 1450 aa13.83□□□□□ -0.2
PTK2-205ENST00000517453 CLASP1Q7Z460 1538 aa13.83□□□□□ -0.2
PTK2-205ENST00000517453 SNAPC4Q5SXM2 1469 aa13.82□□□□□ -0.2
PTK2-205ENST00000517453 MAGI1Q96QZ7 1491 aaPredicted RBP13.82□□□□□ -0.2
PTK2-205ENST00000517453 PBRM1Q86U86 1689 aa13.81□□□□□ -0.2
PTK2-205ENST00000517453 GRIN2BQ13224 1484 aa13.8□□□□□ -0.2
PTK2-205ENST00000517453 FBLN2P98095 1184 aa13.79□□□□□ -0.2
PTK2-205ENST00000517453 CYB5RLQ6IPT4 315 aa13.79□□□□□ -0.2
PTK2-205ENST00000517453 SYNJ1O43426 1573 aa13.77□□□□□ -0.21
PTK2-205ENST00000517453 ABCA5Q8WWZ7 1642 aa13.77□□□□□ -0.21
PTK2-205ENST00000517453 ABCA10Q8WWZ4 1543 aa13.76□□□□□ -0.21
PTK2-205ENST00000517453 SYNJ2O15056 1496 aa13.76□□□□□ -0.21
PTK2-205ENST00000517453 GAPVD1Q14C86 1478 aa13.74□□□□□ -0.21
PTK2-205ENST00000517453 CHMP7Q8WUX9 453 aaPredicted RBP13.73□□□□□ -0.21
PTK2-205ENST00000517453 BIVM-ERCC5R4GMW8 1640 aa13.72□□□□□ -0.21
PTK2-205ENST00000517453 TOP2BQ02880 1626 aa13.69□□□□□ -0.22
PTK2-205ENST00000517453 SUPT5HO00267 1087 aaKnown RBP13.69□□□□□ -0.22
PTK2-205ENST00000517453 WRNQ14191 1432 aaPredicted RBP eCLIP13.65□□□□□ -0.22
PTK2-205ENST00000517453 ADAMTS12P58397 1594 aa13.64□□□□□ -0.23
PTK2-205ENST00000517453 GRIN2AQ12879 1464 aa13.62□□□□□ -0.23
PTK2-205ENST00000517453 NUP160Q12769 1436 aa13.61□□□□□ -0.23
PTK2-205ENST00000517453 CEP170Q5SW79 1584 aa13.61□□□□□ -0.23
PTK2-205ENST00000517453 SHROOM2Q13796 1616 aa13.61□□□□□ -0.23
PTK2-205ENST00000517453 ERICH3Q5RHP9 1530 aa13.59□□□□□ -0.23
PTK2-205ENST00000517453 ERCC6L2Q5T890 1561 aa13.59□□□□□ -0.23
PTK2-205ENST00000517453 TRHP20396 242 aaPredicted RBP13.59□□□□□ -0.23
PTK2-205ENST00000517453 FHAD1B1AJZ9 1412 aa13.57□□□□□ -0.24
PTK2-205ENST00000517453 SENP3Q9H4L4 574 aaPredicted RBP13.57□□□□□ -0.24
PTK2-205ENST00000517453 RUSC2Q8N2Y8 1516 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms