RNA–Protein interactions for RNA: ENST00000517421.1

DCTN4-204, Transcript of dynactin subunit 4, humanhuman

TSL 5

Gene DCTN4, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCTN4-204ENST00000517421 NISCHQ9Y2I1 1504 aa38.9■■■■□ 3.82
DCTN4-204ENST00000517421 CCDC180Q9P1Z9 1646 aa34.84■■■■□ 3.17
DCTN4-204ENST00000517421 ABCC9O60706 1549 aa34.54■■■■□ 3.12
DCTN4-204ENST00000517421 RB1CC1Q8TDY2 1594 aa32.96■■■□□ 2.87
DCTN4-204ENST00000517421 NACADO15069 1562 aa32.8■■■□□ 2.84
DCTN4-204ENST00000517421 DCAF8L2P0C7V8 631 aa32.51■■■□□ 2.79
DCTN4-204ENST00000517421 MYO15BQ96JP2 1530 aa32.44■■■□□ 2.78
DCTN4-204ENST00000517421 UNC13AQ9UPW8 1703 aa32.43■■■□□ 2.78
DCTN4-204ENST00000517421 ZCCHC6Q5VYS8 1495 aaKnown RBP32.33■■■□□ 2.77
DCTN4-204ENST00000517421 DNAJC5BQ9UF47 199 aa32.2■■■□□ 2.75
DCTN4-204ENST00000517421 PABPN1Q86U42 306 aaKnown RBP eCLIP32.14■■■□□ 2.74
DCTN4-204ENST00000517421 DCAF1Q9Y4B6 1507 aa32.14■■■□□ 2.74
DCTN4-204ENST00000517421 BICRAQ9NZM4 1560 aa32.14■■■□□ 2.74
DCTN4-204ENST00000517421 SCRIBQ14160 1630 aa31.77■■■□□ 2.68
DCTN4-204ENST00000517421 SHROOM4Q9ULL8 1493 aa31.58■■■□□ 2.65
DCTN4-204ENST00000517421 CC2D2AQ9P2K1 1620 aa31.27■■■□□ 2.6
DCTN4-204ENST00000517421 EIF4G1Q04637 1599 aaKnown RBP31.26■■■□□ 2.59
DCTN4-204ENST00000517421 CECR2Q9BXF3 1484 aa31.06■■■□□ 2.56
DCTN4-204ENST00000517421 SMARCA4P51532 1647 aa30.33■■■□□ 2.45
DCTN4-204ENST00000517421 NCAPD3P42695 1498 aa30.27■■■□□ 2.44
DCTN4-204ENST00000517421 ATAD2BQ9ULI0 1458 aa30.25■■■□□ 2.43
DCTN4-204ENST00000517421 BAZ1AQ9NRL2 1556 aaPredicted RBP30.15■■■□□ 2.42
DCTN4-204ENST00000517421 SMARCA2P51531 1590 aa30.14■■■□□ 2.42
DCTN4-204ENST00000517421 HMGXB3Q12766 1538 aa30.12■■■□□ 2.41
DCTN4-204ENST00000517421 PEG3Q9GZU2 1588 aa30.04■■■□□ 2.4
DCTN4-204ENST00000517421 MROH2BQ7Z745 1585 aa30.02■■■□□ 2.4
DCTN4-204ENST00000517421 BAZ1BQ9UIG0 1483 aaKnown RBP29.93■■■□□ 2.38
DCTN4-204ENST00000517421 NESP48681 1621 aa29.8■■■□□ 2.36
DCTN4-204ENST00000517421 ERCC6Q03468 1493 aa29.72■■■□□ 2.35
DCTN4-204ENST00000517421 WIZO95785 1651 aa29.7■■■□□ 2.35
DCTN4-204ENST00000517421 CUX2O14529 1486 aa29.61■■■□□ 2.33
DCTN4-204ENST00000517421 LAMC3Q9Y6N6 1575 aa29.57■■■□□ 2.32
DCTN4-204ENST00000517421 THOC2Q8NI27 1593 aaKnown RBP29.5■■■□□ 2.31
DCTN4-204ENST00000517421 KIF21AQ7Z4S6 1674 aa29.48■■■□□ 2.31
DCTN4-204ENST00000517421 RSF1Q96T23 1441 aaPredicted RBP29.44■■■□□ 2.3
DCTN4-204ENST00000517421 CADPSQ9ULU8 1353 aa29.33■■■□□ 2.29
DCTN4-204ENST00000517421 PDS5BQ9NTI5 1447 aa29.29■■■□□ 2.28
DCTN4-204ENST00000517421 TOP2AP11388 1531 aaKnown RBP29.29■■■□□ 2.28
DCTN4-204ENST00000517421 DNAJC5Q9H3Z4 198 aa29.27■■■□□ 2.28
DCTN4-204ENST00000517421 MRC2Q9UBG0 1479 aa29.11■■■□□ 2.25
DCTN4-204ENST00000517421 CFTRP13569 1480 aa29.1■■■□□ 2.25
DCTN4-204ENST00000517421 WDR62O43379 1518 aa29.1■■■□□ 2.25
DCTN4-204ENST00000517421 FANCD2Q9BXW9 1451 aa29.04■■■□□ 2.24
DCTN4-204ENST00000517421 CEP164Q9UPV0 1460 aa29.04■■■□□ 2.24
DCTN4-204ENST00000517421 PRDM2Q13029 1718 aa28.96■■■□□ 2.23
DCTN4-204ENST00000517421 CCDC88BA6NC98 1476 aa28.93■■■□□ 2.22
DCTN4-204ENST00000517421 URB2Q14146 1524 aaKnown RBP28.85■■■□□ 2.21
DCTN4-204ENST00000517421 TOPBP1Q92547 1522 aa28.55■■■□□ 2.16
DCTN4-204ENST00000517421 DNMBPQ6XZF7 1577 aa28.47■■■□□ 2.15
DCTN4-204ENST00000517421 ZNF608Q9ULD9 1512 aaPredicted RBP28.45■■■□□ 2.15
DCTN4-204ENST00000517421 IFT140Q96RY7 1462 aa28.42■■■□□ 2.14
DCTN4-204ENST00000517421 ABCC8Q09428 1581 aa28.38■■■□□ 2.13
DCTN4-204ENST00000517421 EIF4G3O43432 1585 aaKnown RBP28.34■■■□□ 2.13
DCTN4-204ENST00000517421 TARBP1Q13395 1621 aaKnown RBP28.34■■■□□ 2.13
DCTN4-204ENST00000517421 POLA1P09884 1462 aaPredicted RBP28.27■■■□□ 2.12
DCTN4-204ENST00000517421 CUX1P39880 1505 aa28.2■■■□□ 2.1
DCTN4-204ENST00000517421 SUPT5HO00267 1087 aaKnown RBP28.19■■■□□ 2.1
DCTN4-204ENST00000517421 OSCARQ8IYS5 282 aa28.19■■■□□ 2.1
DCTN4-204ENST00000517421 RAD54L2Q9Y4B4 1467 aa28.17■■■□□ 2.1
DCTN4-204ENST00000517421 AQRO60306 1485 aaKnown RBP eCLIP28.16■■■□□ 2.16e-7■■■■□ 24.3
DCTN4-204ENST00000517421 FGD5Q6ZNL6 1462 aa28.14■■■□□ 2.09
DCTN4-204ENST00000517421 CHD1O14646 1710 aa28.1■■■□□ 2.09
DCTN4-204ENST00000517421 TRIM41Q8WV44 630 aa28.06■■■□□ 2.08
DCTN4-204ENST00000517421 SOGA1O94964 1423 aa28.06■■■□□ 2.08
DCTN4-204ENST00000517421 WDR97A6NE52 1622 aa28.04■■■□□ 2.08
DCTN4-204ENST00000517421 RIMBP3CA6NJZ7 1639 aa28.01■■■□□ 2.07
DCTN4-204ENST00000517421 RIMBP3BA6NNM3 1639 aa28.01■■■□□ 2.07
DCTN4-204ENST00000517421 RIMBP3Q9UFD9 1639 aa28.01■■■□□ 2.07
DCTN4-204ENST00000517421 TDRD9Q8NDG6 1382 aaKnown RBP28■■■□□ 2.07
DCTN4-204ENST00000517421 ARHGEF11O15085 1522 aa27.92■■■□□ 2.06
DCTN4-204ENST00000517421 SNAPC4Q5SXM2 1469 aa27.91■■■□□ 2.06
DCTN4-204ENST00000517421 PBRM1Q86U86 1689 aa27.86■■■□□ 2.05
DCTN4-204ENST00000517421 ABCA5Q8WWZ7 1642 aa27.83■■■□□ 2.05
DCTN4-204ENST00000517421 BIVM-ERCC5R4GMW8 1640 aa27.82■■■□□ 2.04
DCTN4-204ENST00000517421 SYNJ1O43426 1573 aa27.82■■■□□ 2.04
DCTN4-204ENST00000517421 GRIN2BQ13224 1484 aa27.81■■■□□ 2.04
DCTN4-204ENST00000517421 MAGI1Q96QZ7 1491 aaPredicted RBP27.81■■■□□ 2.04
DCTN4-204ENST00000517421 ABCA10Q8WWZ4 1543 aa27.81■■■□□ 2.04
DCTN4-204ENST00000517421 TOP2BQ02880 1626 aa27.79■■■□□ 2.04
DCTN4-204ENST00000517421 FBLN2P98095 1184 aa27.79■■■□□ 2.04
DCTN4-204ENST00000517421 GAPVD1Q14C86 1478 aa27.76■■■□□ 2.04
DCTN4-204ENST00000517421 CLASP1Q7Z460 1538 aa27.76■■■□□ 2.03
DCTN4-204ENST00000517421 WRNQ14191 1432 aaPredicted RBP eCLIP27.72■■■□□ 2.03
DCTN4-204ENST00000517421 SYNJ2O15056 1496 aa27.71■■■□□ 2.03
DCTN4-204ENST00000517421 ARAP1Q96P48 1450 aa27.68■■■□□ 2.02
DCTN4-204ENST00000517421 CHMP7Q8WUX9 453 aaPredicted RBP27.62■■■□□ 2.01
DCTN4-204ENST00000517421 ADAMTS12P58397 1594 aa27.59■■■□□ 2.01
DCTN4-204ENST00000517421 CYB5RLQ6IPT4 315 aa27.55■■■□□ 2
DCTN4-204ENST00000517421 GRIN2AQ12879 1464 aa27.51■■□□□ 1.99
DCTN4-204ENST00000517421 CEP170Q5SW79 1584 aa27.47■■□□□ 1.99
DCTN4-204ENST00000517421 ERICH3Q5RHP9 1530 aa27.46■■□□□ 1.99
DCTN4-204ENST00000517421 NUP160Q12769 1436 aa27.41■■□□□ 1.98
DCTN4-204ENST00000517421 FHAD1B1AJZ9 1412 aa27.4■■□□□ 1.98
DCTN4-204ENST00000517421 ERCC6L2Q5T890 1561 aa27.39■■□□□ 1.97
DCTN4-204ENST00000517421 SHROOM2Q13796 1616 aa27.33■■□□□ 1.97
DCTN4-204ENST00000517421 RUSC2Q8N2Y8 1516 aa27.21■■□□□ 1.95
DCTN4-204ENST00000517421 CUL7Q14999 1698 aa27.14■■□□□ 1.93
DCTN4-204ENST00000517421 IGF1RP08069 1367 aa27.13■■□□□ 1.93
DCTN4-204ENST00000517421 KIF27Q86VH2 1401 aa27.13■■□□□ 1.93
DCTN4-204ENST00000517421 TRHP20396 242 aaPredicted RBP27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms