RNA–Protein interactions for RNA: ENST00000517420.1

AC090197.1-201, humanhuman

TSL 2

Gene AC090197.1, Length 1,798 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC090197.1-201ENST00000517420 NISCHQ9Y2I1 1504 aa35.27■■■■□ 3.24
AC090197.1-201ENST00000517420 CCDC180Q9P1Z9 1646 aa31■■■□□ 2.55
AC090197.1-201ENST00000517420 ABCC9O60706 1549 aa29.94■■■□□ 2.38
AC090197.1-201ENST00000517420 ZCCHC6Q5VYS8 1495 aaKnown RBP29.51■■■□□ 2.31
AC090197.1-201ENST00000517420 DCAF8L2P0C7V8 631 aa29.33■■■□□ 2.29
AC090197.1-201ENST00000517420 DCAF1Q9Y4B6 1507 aa29.13■■■□□ 2.25
AC090197.1-201ENST00000517420 NACADO15069 1562 aa29.03■■■□□ 2.24
AC090197.1-201ENST00000517420 MYO15BQ96JP2 1530 aa29.02■■■□□ 2.24
AC090197.1-201ENST00000517420 RB1CC1Q8TDY2 1594 aa28.93■■■□□ 2.22
AC090197.1-201ENST00000517420 SCRIBQ14160 1630 aa28.46■■■□□ 2.15
AC090197.1-201ENST00000517420 SHROOM4Q9ULL8 1493 aa28.36■■■□□ 2.13
AC090197.1-201ENST00000517420 UNC13AQ9UPW8 1703 aa28.34■■■□□ 2.13
AC090197.1-201ENST00000517420 PABPN1Q86U42 306 aaKnown RBP eCLIP28.12■■■□□ 2.09
AC090197.1-201ENST00000517420 BICRAQ9NZM4 1560 aa28.12■■■□□ 2.09
AC090197.1-201ENST00000517420 CECR2Q9BXF3 1484 aa27.49■■□□□ 1.99
AC090197.1-201ENST00000517420 EIF4G1Q04637 1599 aaKnown RBP27.31■■□□□ 1.96
AC090197.1-201ENST00000517420 BAZ1AQ9NRL2 1556 aaPredicted RBP27.26■■□□□ 1.95
AC090197.1-201ENST00000517420 MROH2BQ7Z745 1585 aa27.24■■□□□ 1.95
AC090197.1-201ENST00000517420 SMARCA4P51532 1647 aa27.23■■□□□ 1.95
AC090197.1-201ENST00000517420 RSF1Q96T23 1441 aaPredicted RBP27.13■■□□□ 1.93
AC090197.1-201ENST00000517420 CC2D2AQ9P2K1 1620 aa27.06■■□□□ 1.92
AC090197.1-201ENST00000517420 DNAJC5BQ9UF47 199 aa27.03■■□□□ 1.92
AC090197.1-201ENST00000517420 WIZO95785 1651 aa26.98■■□□□ 1.91
AC090197.1-201ENST00000517420 ATAD2BQ9ULI0 1458 aa26.96■■□□□ 1.91
AC090197.1-201ENST00000517420 SUPT5HO00267 1087 aaKnown RBP26.96■■□□□ 1.91
AC090197.1-201ENST00000517420 PEG3Q9GZU2 1588 aa26.93■■□□□ 1.9
AC090197.1-201ENST00000517420 SMARCA2P51531 1590 aa26.89■■□□□ 1.89
AC090197.1-201ENST00000517420 NCAPD3P42695 1498 aa26.82■■□□□ 1.88
AC090197.1-201ENST00000517420 BAZ1BQ9UIG0 1483 aaKnown RBP26.75■■□□□ 1.87
AC090197.1-201ENST00000517420 HMGXB3Q12766 1538 aa26.72■■□□□ 1.87
AC090197.1-201ENST00000517420 TOP2AP11388 1531 aaKnown RBP26.66■■□□□ 1.86
AC090197.1-201ENST00000517420 CCDC88BA6NC98 1476 aa26.4■■□□□ 1.82
AC090197.1-201ENST00000517420 NESP48681 1621 aa26.11■■□□□ 1.77
AC090197.1-201ENST00000517420 CADPSQ9ULU8 1353 aa26.1■■□□□ 1.77
AC090197.1-201ENST00000517420 CFTRP13569 1480 aa26.06■■□□□ 1.76
AC090197.1-201ENST00000517420 LAMC3Q9Y6N6 1575 aa25.99■■□□□ 1.75
AC090197.1-201ENST00000517420 PRDM2Q13029 1718 aa25.82■■□□□ 1.72
AC090197.1-201ENST00000517420 PDS5BQ9NTI5 1447 aa25.81■■□□□ 1.72
AC090197.1-201ENST00000517420 FANCD2Q9BXW9 1451 aa25.81■■□□□ 1.72
AC090197.1-201ENST00000517420 KIF21AQ7Z4S6 1674 aa25.74■■□□□ 1.71
AC090197.1-201ENST00000517420 ERCC6Q03468 1493 aa25.7■■□□□ 1.7
AC090197.1-201ENST00000517420 CEP164Q9UPV0 1460 aa25.69■■□□□ 1.7
AC090197.1-201ENST00000517420 ABCC8Q09428 1581 aa25.66■■□□□ 1.7
AC090197.1-201ENST00000517420 WRNQ14191 1432 aaPredicted RBP eCLIP25.54■■□□□ 1.68
AC090197.1-201ENST00000517420 URB2Q14146 1524 aaKnown RBP25.54■■□□□ 1.68
AC090197.1-201ENST00000517420 MRC2Q9UBG0 1479 aa25.53■■□□□ 1.68
AC090197.1-201ENST00000517420 CUX1P39880 1505 aa25.51■■□□□ 1.67
AC090197.1-201ENST00000517420 THOC2Q8NI27 1593 aaKnown RBP25.5■■□□□ 1.67
AC090197.1-201ENST00000517420 SYNJ1O43426 1573 aa25.48■■□□□ 1.67
AC090197.1-201ENST00000517420 CHIC1Q5VXU3 224 aa25.48■■□□□ 1.67
AC090197.1-201ENST00000517420 TOPBP1Q92547 1522 aa25.46■■□□□ 1.67
AC090197.1-201ENST00000517420 DNMBPQ6XZF7 1577 aa25.44■■□□□ 1.66
AC090197.1-201ENST00000517420 WDR62O43379 1518 aa25.42■■□□□ 1.66
AC090197.1-201ENST00000517420 TOP2BQ02880 1626 aa25.4■■□□□ 1.66
AC090197.1-201ENST00000517420 BIVM-ERCC5R4GMW8 1640 aa25.37■■□□□ 1.65
AC090197.1-201ENST00000517420 TRIM41Q8WV44 630 aa25.36■■□□□ 1.65
AC090197.1-201ENST00000517420 FGD5Q6ZNL6 1462 aa25.32■■□□□ 1.64
AC090197.1-201ENST00000517420 POLA1P09884 1462 aaPredicted RBP25.3■■□□□ 1.64
AC090197.1-201ENST00000517420 CUX2O14529 1486 aa25.24■■□□□ 1.63
AC090197.1-201ENST00000517420 RAD54L2Q9Y4B4 1467 aa25.22■■□□□ 1.63
AC090197.1-201ENST00000517420 SOGA1O94964 1423 aa25.19■■□□□ 1.62
AC090197.1-201ENST00000517420 TARBP1Q13395 1621 aaKnown RBP25.13■■□□□ 1.61
AC090197.1-201ENST00000517420 IFT140Q96RY7 1462 aa25.1■■□□□ 1.61
AC090197.1-201ENST00000517420 ABCA10Q8WWZ4 1543 aa25.07■■□□□ 1.6
AC090197.1-201ENST00000517420 ZNF608Q9ULD9 1512 aaPredicted RBP25.05■■□□□ 1.6
AC090197.1-201ENST00000517420 WDR97A6NE52 1622 aa25.04■■□□□ 1.6
AC090197.1-201ENST00000517420 TDRD9Q8NDG6 1382 aaKnown RBP25.03■■□□□ 1.6
AC090197.1-201ENST00000517420 RUSC2Q8N2Y8 1516 aa25.01■■□□□ 1.59
AC090197.1-201ENST00000517420 AQRO60306 1485 aaKnown RBP eCLIP24.98■■□□□ 1.59
AC090197.1-201ENST00000517420 KIF27Q86VH2 1401 aa24.93■■□□□ 1.58
AC090197.1-201ENST00000517420 ABCA5Q8WWZ7 1642 aa24.92■■□□□ 1.58
AC090197.1-201ENST00000517420 FAM9AQ8IZU1 332 aaPredicted RBP24.92■■□□□ 1.58
AC090197.1-201ENST00000517420 EIF4G3O43432 1585 aaKnown RBP24.92■■□□□ 1.58
AC090197.1-201ENST00000517420 GAPVD1Q14C86 1478 aa24.9■■□□□ 1.58
AC090197.1-201ENST00000517420 IGF1RP08069 1367 aa24.81■■□□□ 1.56
AC090197.1-201ENST00000517420 GRIN2BQ13224 1484 aa24.79■■□□□ 1.56
AC090197.1-201ENST00000517420 EEA1Q15075 1411 aa24.79■■□□□ 1.56
AC090197.1-201ENST00000517420 PBRM1Q86U86 1689 aa24.78■■□□□ 1.56
AC090197.1-201ENST00000517420 CSRNP3Q8WYN3 585 aa24.76■■□□□ 1.55
AC090197.1-201ENST00000517420 ERICH3Q5RHP9 1530 aa24.75■■□□□ 1.55
AC090197.1-201ENST00000517420 SNAPC4Q5SXM2 1469 aa24.72■■□□□ 1.55
AC090197.1-201ENST00000517420 CARMIL1Q5VZK9 1371 aa24.66■■□□□ 1.54
AC090197.1-201ENST00000517420 MAGI1Q96QZ7 1491 aaPredicted RBP24.65■■□□□ 1.54
AC090197.1-201ENST00000517420 ADAMTS12P58397 1594 aa24.64■■□□□ 1.53
AC090197.1-201ENST00000517420 PRXQ9BXM0 1461 aa24.63■■□□□ 1.53
AC090197.1-201ENST00000517420 CUL7Q14999 1698 aa24.62■■□□□ 1.53
AC090197.1-201ENST00000517420 EHMT2Q96KQ7 1210 aa24.61■■□□□ 1.53
AC090197.1-201ENST00000517420 FHAD1B1AJZ9 1412 aa24.61■■□□□ 1.53
AC090197.1-201ENST00000517420 SYNJ2O15056 1496 aa24.57■■□□□ 1.52
AC090197.1-201ENST00000517420 FBLN2P98095 1184 aa24.57■■□□□ 1.52
AC090197.1-201ENST00000517420 RAPGEF2Q9Y4G8 1499 aa24.56■■□□□ 1.52
AC090197.1-201ENST00000517420 CHMP7Q8WUX9 453 aaPredicted RBP24.54■■□□□ 1.52
AC090197.1-201ENST00000517420 KIF21BO75037 1637 aa24.52■■□□□ 1.52
AC090197.1-201ENST00000517420 LOC105371045A0A1W2PR82 267 aa24.5■■□□□ 1.51
AC090197.1-201ENST00000517420 GRIN2AQ12879 1464 aa24.5■■□□□ 1.51
AC090197.1-201ENST00000517420 CHD1O14646 1710 aa24.48■■□□□ 1.51
AC090197.1-201ENST00000517420 GOLGA3Q08378 1498 aa24.45■■□□□ 1.5
AC090197.1-201ENST00000517420 CEP170Q5SW79 1584 aa24.38■■□□□ 1.49
AC090197.1-201ENST00000517420 UBTFP17480 764 aaKnown RBP24.38■■□□□ 1.49
AC090197.1-201ENST00000517420 NUP160Q12769 1436 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms