RNA–Protein interactions for RNA: ENST00000516005.1

RN7SKP18-201, Transcript of RNA, 7SK small nuclear pseudogene 18, humanhuman

BASIC

Gene RN7SKP18, Length 275 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP18-201ENST00000516005 AEBP2Q6ZN18 517 aaPredicted RBP9.61□□□□□ -0.87
RN7SKP18-201ENST00000516005 CHIC1Q5VXU3 224 aa9.16□□□□□ -0.94
RN7SKP18-201ENST00000516005 NISCHQ9Y2I1 1504 aa9.04□□□□□ -0.96
RN7SKP18-201ENST00000516005 CCDC180Q9P1Z9 1646 aa8.21□□□□□ -1.1
RN7SKP18-201ENST00000516005 SENP3Q9H4L4 574 aaPredicted RBP8.16□□□□□ -1.1
RN7SKP18-201ENST00000516005 PHF23Q9BUL5 403 aaPredicted RBP8.09□□□□□ -1.11
RN7SKP18-201ENST00000516005 ABCC9O60706 1549 aa8.08□□□□□ -1.12
RN7SKP18-201ENST00000516005 POTEDQ86YR6 584 aa7.88□□□□□ -1.15
RN7SKP18-201ENST00000516005 RB1CC1Q8TDY2 1594 aa7.78□□□□□ -1.16
RN7SKP18-201ENST00000516005 NACADO15069 1562 aa7.71□□□□□ -1.17
RN7SKP18-201ENST00000516005 DCAF8L2P0C7V8 631 aa7.62□□□□□ -1.19
RN7SKP18-201ENST00000516005 FOXD1Q16676 465 aa7.62□□□□□ -1.19
RN7SKP18-201ENST00000516005 UNC13AQ9UPW8 1703 aa7.61□□□□□ -1.19
RN7SKP18-201ENST00000516005 MYO15BQ96JP2 1530 aa7.6□□□□□ -1.19
RN7SKP18-201ENST00000516005 DCAF1Q9Y4B6 1507 aa7.5□□□□□ -1.21
RN7SKP18-201ENST00000516005 ZCCHC6Q5VYS8 1495 aaKnown RBP7.49□□□□□ -1.21
RN7SKP18-201ENST00000516005 PABPN1Q86U42 306 aaKnown RBP eCLIP7.47□□□□□ -1.21
RN7SKP18-201ENST00000516005 SHROOM4Q9ULL8 1493 aa7.46□□□□□ -1.22
RN7SKP18-201ENST00000516005 BICRAQ9NZM4 1560 aa7.46□□□□□ -1.22
RN7SKP18-201ENST00000516005 DNAJC5BQ9UF47 199 aa7.45□□□□□ -1.22
RN7SKP18-201ENST00000516005 SCRIBQ14160 1630 aa7.41□□□□□ -1.22
RN7SKP18-201ENST00000516005 PLPPR3Q6T4P5 718 aa7.34□□□□□ -1.23
RN7SKP18-201ENST00000516005 CC2D2AQ9P2K1 1620 aa7.33□□□□□ -1.24
RN7SKP18-201ENST00000516005 EIF4G1Q04637 1599 aaKnown RBP7.31□□□□□ -1.24
RN7SKP18-201ENST00000516005 CECR2Q9BXF3 1484 aa7.29□□□□□ -1.24
RN7SKP18-201ENST00000516005 PPP6R1Q9UPN7 881 aa7.18□□□□□ -1.26
RN7SKP18-201ENST00000516005 ADRA2BP18089 450 aa7.15□□□□□ -1.26
RN7SKP18-201ENST00000516005 PIAS4Q8N2W9 510 aaPredicted RBP7.12□□□□□ -1.27
RN7SKP18-201ENST00000516005 SMARCA2P51531 1590 aa7.09□□□□□ -1.27
RN7SKP18-201ENST00000516005 MSH5O43196 834 aa7.09□□□□□ -1.27
RN7SKP18-201ENST00000516005 SMARCA4P51532 1647 aa7.08□□□□□ -1.28
RN7SKP18-201ENST00000516005 HMGXB3Q12766 1538 aa7.06□□□□□ -1.28
RN7SKP18-201ENST00000516005 NCAPD3P42695 1498 aa7.06□□□□□ -1.28
RN7SKP18-201ENST00000516005 BAZ1AQ9NRL2 1556 aaPredicted RBP7.06□□□□□ -1.28
RN7SKP18-201ENST00000516005 ERCC6Q03468 1493 aa7.04□□□□□ -1.28
RN7SKP18-201ENST00000516005 ATAD2BQ9ULI0 1458 aa7.04□□□□□ -1.28
RN7SKP18-201ENST00000516005 BAZ1BQ9UIG0 1483 aaKnown RBP7.02□□□□□ -1.29
RN7SKP18-201ENST00000516005 CUX2O14529 1486 aa7.01□□□□□ -1.29
RN7SKP18-201ENST00000516005 PEG3Q9GZU2 1588 aa7□□□□□ -1.29
RN7SKP18-201ENST00000516005 LAMC3Q9Y6N6 1575 aa6.97□□□□□ -1.29
RN7SKP18-201ENST00000516005 MROH2BQ7Z745 1585 aa6.93□□□□□ -1.3
RN7SKP18-201ENST00000516005 KIF21AQ7Z4S6 1674 aa6.92□□□□□ -1.3
RN7SKP18-201ENST00000516005 NESP48681 1621 aa6.91□□□□□ -1.3
RN7SKP18-201ENST00000516005 DNAJC5Q9H3Z4 198 aa6.91□□□□□ -1.3
RN7SKP18-201ENST00000516005 PDS5BQ9NTI5 1447 aa6.91□□□□□ -1.3
RN7SKP18-201ENST00000516005 THOC2Q8NI27 1593 aaKnown RBP6.91□□□□□ -1.3
RN7SKP18-201ENST00000516005 WIZO95785 1651 aa6.89□□□□□ -1.31
RN7SKP18-201ENST00000516005 PRDM2Q13029 1718 aa6.86□□□□□ -1.31
RN7SKP18-201ENST00000516005 CADPSQ9ULU8 1353 aa6.84□□□□□ -1.31
RN7SKP18-201ENST00000516005 TOP2AP11388 1531 aaKnown RBP6.83□□□□□ -1.32
RN7SKP18-201ENST00000516005 MRC2Q9UBG0 1479 aa6.83□□□□□ -1.32
RN7SKP18-201ENST00000516005 CEP164Q9UPV0 1460 aa6.82□□□□□ -1.32
RN7SKP18-201ENST00000516005 WDR62O43379 1518 aa6.81□□□□□ -1.32
RN7SKP18-201ENST00000516005 FANCD2Q9BXW9 1451 aa6.79□□□□□ -1.32
RN7SKP18-201ENST00000516005 RSF1Q96T23 1441 aaPredicted RBP6.78□□□□□ -1.32
RN7SKP18-201ENST00000516005 CFTRP13569 1480 aa6.77□□□□□ -1.33
RN7SKP18-201ENST00000516005 ABCC8Q09428 1581 aa6.71□□□□□ -1.34
RN7SKP18-201ENST00000516005 CCDC88BA6NC98 1476 aa6.7□□□□□ -1.34
RN7SKP18-201ENST00000516005 URB2Q14146 1524 aaKnown RBP6.7□□□□□ -1.34
RN7SKP18-201ENST00000516005 IFT140Q96RY7 1462 aa6.68□□□□□ -1.34
RN7SKP18-201ENST00000516005 DNMBPQ6XZF7 1577 aa6.67□□□□□ -1.34
RN7SKP18-201ENST00000516005 TOPBP1Q92547 1522 aa6.66□□□□□ -1.34
RN7SKP18-201ENST00000516005 OSCARQ8IYS5 282 aa6.66□□□□□ -1.34
RN7SKP18-201ENST00000516005 TRIM41Q8WV44 630 aa6.64□□□□□ -1.35
RN7SKP18-201ENST00000516005 EIF4G3O43432 1585 aaKnown RBP6.64□□□□□ -1.35
RN7SKP18-201ENST00000516005 WDR97A6NE52 1622 aa6.62□□□□□ -1.35
RN7SKP18-201ENST00000516005 CHD1O14646 1710 aa6.62□□□□□ -1.35
RN7SKP18-201ENST00000516005 TARBP1Q13395 1621 aaKnown RBP6.6□□□□□ -1.35
RN7SKP18-201ENST00000516005 ZNF608Q9ULD9 1512 aaPredicted RBP6.6□□□□□ -1.35
RN7SKP18-201ENST00000516005 RIMBP3CA6NJZ7 1639 aa6.59□□□□□ -1.35
RN7SKP18-201ENST00000516005 RIMBP3BA6NNM3 1639 aa6.59□□□□□ -1.35
RN7SKP18-201ENST00000516005 RIMBP3Q9UFD9 1639 aa6.59□□□□□ -1.35
RN7SKP18-201ENST00000516005 POLA1P09884 1462 aaPredicted RBP6.58□□□□□ -1.36
RN7SKP18-201ENST00000516005 MAPK8IP2Q13387 824 aaPredicted RBP6.56□□□□□ -1.36
RN7SKP18-201ENST00000516005 SOGA1O94964 1423 aa6.56□□□□□ -1.36
RN7SKP18-201ENST00000516005 ARHGEF11O15085 1522 aa6.55□□□□□ -1.36
RN7SKP18-201ENST00000516005 PBRM1Q86U86 1689 aa6.55□□□□□ -1.36
RN7SKP18-201ENST00000516005 FGD5Q6ZNL6 1462 aa6.55□□□□□ -1.36
RN7SKP18-201ENST00000516005 SYNJ1O43426 1573 aa6.55□□□□□ -1.36
RN7SKP18-201ENST00000516005 AQRO60306 1485 aaKnown RBP eCLIP6.54□□□□□ -1.36
RN7SKP18-201ENST00000516005 MAGI1Q96QZ7 1491 aaPredicted RBP6.54□□□□□ -1.36
RN7SKP18-201ENST00000516005 FBLN2P98095 1184 aa6.54□□□□□ -1.36
RN7SKP18-201ENST00000516005 RAD54L2Q9Y4B4 1467 aa6.53□□□□□ -1.36
RN7SKP18-201ENST00000516005 CUX1P39880 1505 aa6.52□□□□□ -1.37
RN7SKP18-201ENST00000516005 GRIN2BQ13224 1484 aa6.52□□□□□ -1.37
RN7SKP18-201ENST00000516005 SNAPC4Q5SXM2 1469 aa6.52□□□□□ -1.37
RN7SKP18-201ENST00000516005 SCAF1Q9H7N4 1312 aaKnown RBP6.51□□□□□ -1.37
RN7SKP18-201ENST00000516005 SUPT5HO00267 1087 aaKnown RBP6.51□□□□□ -1.37
RN7SKP18-201ENST00000516005 CHMP7Q8WUX9 453 aaPredicted RBP6.51□□□□□ -1.37
RN7SKP18-201ENST00000516005 SYNJ2O15056 1496 aa6.5□□□□□ -1.37
RN7SKP18-201ENST00000516005 TDRD9Q8NDG6 1382 aaKnown RBP6.5□□□□□ -1.37
RN7SKP18-201ENST00000516005 ABCA5Q8WWZ7 1642 aa6.5□□□□□ -1.37
RN7SKP18-201ENST00000516005 BIVM-ERCC5R4GMW8 1640 aa6.5□□□□□ -1.37
RN7SKP18-201ENST00000516005 GAPVD1Q14C86 1478 aa6.49□□□□□ -1.37
RN7SKP18-201ENST00000516005 ABCA10Q8WWZ4 1543 aa6.49□□□□□ -1.37
RN7SKP18-201ENST00000516005 CYB5RLQ6IPT4 315 aa6.48□□□□□ -1.37
RN7SKP18-201ENST00000516005 DMRT2Q9Y5R5 561 aa6.48□□□□□ -1.37
RN7SKP18-201ENST00000516005 CLASP1Q7Z460 1538 aa6.48□□□□□ -1.37
RN7SKP18-201ENST00000516005 WRNQ14191 1432 aaPredicted RBP eCLIP6.48□□□□□ -1.37
RN7SKP18-201ENST00000516005 TOP2BQ02880 1626 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms