RNA–Protein interactions for RNA: ENST00000515884.5

GATB-214, Transcript of glutamyl-tRNA amidotransferase subunit B, humanhuman

TSL 5

Gene GATB, Length 779 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATB-214ENST00000515884 NISCHQ9Y2I1 1504 aa23.89■■□□□ 1.42
GATB-214ENST00000515884 CCDC180Q9P1Z9 1646 aa21.37■■□□□ 1.01
GATB-214ENST00000515884 ABCC9O60706 1549 aa21.22■□□□□ 0.99
GATB-214ENST00000515884 DCAF8L2P0C7V8 631 aa20.43■□□□□ 0.86
GATB-214ENST00000515884 RB1CC1Q8TDY2 1594 aa20.32■□□□□ 0.84
GATB-214ENST00000515884 NACADO15069 1562 aa20.18■□□□□ 0.82
GATB-214ENST00000515884 MYO15BQ96JP2 1530 aa19.87■□□□□ 0.77
GATB-214ENST00000515884 PABPN1Q86U42 306 aaKnown RBP eCLIP19.83■□□□□ 0.77
GATB-214ENST00000515884 ZCCHC6Q5VYS8 1495 aaKnown RBP19.82■□□□□ 0.76
GATB-214ENST00000515884 UNC13AQ9UPW8 1703 aa19.71■□□□□ 0.75
GATB-214ENST00000515884 DCAF1Q9Y4B6 1507 aa19.71■□□□□ 0.75
GATB-214ENST00000515884 SCRIBQ14160 1630 aa19.57■□□□□ 0.72
GATB-214ENST00000515884 DNAJC5BQ9UF47 199 aa19.51■□□□□ 0.71
GATB-214ENST00000515884 BICRAQ9NZM4 1560 aa19.49■□□□□ 0.71
GATB-214ENST00000515884 SHROOM4Q9ULL8 1493 aa19.39■□□□□ 0.69
GATB-214ENST00000515884 EIF4G1Q04637 1599 aaKnown RBP19.13■□□□□ 0.65
GATB-214ENST00000515884 CC2D2AQ9P2K1 1620 aa19.13■□□□□ 0.65
GATB-214ENST00000515884 CECR2Q9BXF3 1484 aa19.09■□□□□ 0.65
GATB-214ENST00000515884 SMARCA4P51532 1647 aa18.62■□□□□ 0.57
GATB-214ENST00000515884 SMARCA2P51531 1590 aa18.61■□□□□ 0.57
GATB-214ENST00000515884 BAZ1AQ9NRL2 1556 aaPredicted RBP18.61■□□□□ 0.57
GATB-214ENST00000515884 NCAPD3P42695 1498 aa18.56■□□□□ 0.56
GATB-214ENST00000515884 ATAD2BQ9ULI0 1458 aa18.56■□□□□ 0.56
GATB-214ENST00000515884 BAZ1BQ9UIG0 1483 aaKnown RBP18.51■□□□□ 0.55
GATB-214ENST00000515884 HMGXB3Q12766 1538 aa18.47■□□□□ 0.55
GATB-214ENST00000515884 ERCC6Q03468 1493 aa18.46■□□□□ 0.54
GATB-214ENST00000515884 MROH2BQ7Z745 1585 aa18.39■□□□□ 0.53
GATB-214ENST00000515884 PEG3Q9GZU2 1588 aa18.34■□□□□ 0.53
GATB-214ENST00000515884 WIZO95785 1651 aa18.23■□□□□ 0.51
GATB-214ENST00000515884 NESP48681 1621 aa18.21■□□□□ 0.51
GATB-214ENST00000515884 LAMC3Q9Y6N6 1575 aa18.19■□□□□ 0.5
GATB-214ENST00000515884 CUX2O14529 1486 aa18.19■□□□□ 0.5
GATB-214ENST00000515884 PDS5BQ9NTI5 1447 aa18.16■□□□□ 0.5
GATB-214ENST00000515884 RSF1Q96T23 1441 aaPredicted RBP18.11■□□□□ 0.49
GATB-214ENST00000515884 CADPSQ9ULU8 1353 aa18.08■□□□□ 0.49
GATB-214ENST00000515884 TOP2AP11388 1531 aaKnown RBP18.03■□□□□ 0.48
GATB-214ENST00000515884 KIF21AQ7Z4S6 1674 aa18.03■□□□□ 0.48
GATB-214ENST00000515884 THOC2Q8NI27 1593 aaKnown RBP17.95■□□□□ 0.46
GATB-214ENST00000515884 CEP164Q9UPV0 1460 aa17.94■□□□□ 0.46
GATB-214ENST00000515884 MRC2Q9UBG0 1479 aa17.92■□□□□ 0.46
GATB-214ENST00000515884 FANCD2Q9BXW9 1451 aa17.9■□□□□ 0.46
GATB-214ENST00000515884 DNAJC5Q9H3Z4 198 aa17.88■□□□□ 0.45
GATB-214ENST00000515884 CFTRP13569 1480 aa17.86■□□□□ 0.45
GATB-214ENST00000515884 CCDC88BA6NC98 1476 aa17.81■□□□□ 0.44
GATB-214ENST00000515884 WDR62O43379 1518 aa17.79■□□□□ 0.44
GATB-214ENST00000515884 PRDM2Q13029 1718 aa17.77■□□□□ 0.44
GATB-214ENST00000515884 SUPT5HO00267 1087 aaKnown RBP17.75■□□□□ 0.43
GATB-214ENST00000515884 URB2Q14146 1524 aaKnown RBP17.64■□□□□ 0.41
GATB-214ENST00000515884 ABCC8Q09428 1581 aa17.62■□□□□ 0.41
GATB-214ENST00000515884 IFT140Q96RY7 1462 aa17.55■□□□□ 0.4
GATB-214ENST00000515884 TOPBP1Q92547 1522 aa17.54■□□□□ 0.4
GATB-214ENST00000515884 DNMBPQ6XZF7 1577 aa17.53■□□□□ 0.4
GATB-214ENST00000515884 OSCARQ8IYS5 282 aa17.5■□□□□ 0.39
GATB-214ENST00000515884 FBLN2P98095 1184 aa17.42■□□□□ 0.38
GATB-214ENST00000515884 TRIM41Q8WV44 630 aa17.42■□□□□ 0.38
GATB-214ENST00000515884 ZNF608Q9ULD9 1512 aaPredicted RBP17.4■□□□□ 0.38
GATB-214ENST00000515884 SOGA1O94964 1423 aa17.38■□□□□ 0.37
GATB-214ENST00000515884 POLA1P09884 1462 aaPredicted RBP17.37■□□□□ 0.37
GATB-214ENST00000515884 EIF4G3O43432 1585 aaKnown RBP17.36■□□□□ 0.37
GATB-214ENST00000515884 AQRO60306 1485 aaKnown RBP eCLIP17.33■□□□□ 0.37
GATB-214ENST00000515884 FGD5Q6ZNL6 1462 aa17.33■□□□□ 0.37
GATB-214ENST00000515884 RAD54L2Q9Y4B4 1467 aa17.31■□□□□ 0.36
GATB-214ENST00000515884 TDRD9Q8NDG6 1382 aaKnown RBP17.29■□□□□ 0.36
GATB-214ENST00000515884 TARBP1Q13395 1621 aaKnown RBP17.29■□□□□ 0.36
GATB-214ENST00000515884 CUX1P39880 1505 aa17.28■□□□□ 0.36
GATB-214ENST00000515884 CHMP7Q8WUX9 453 aaPredicted RBP17.27■□□□□ 0.36
GATB-214ENST00000515884 WDR97A6NE52 1622 aa17.24■□□□□ 0.35
GATB-214ENST00000515884 CHD1O14646 1710 aa17.21■□□□□ 0.35
GATB-214ENST00000515884 WRNQ14191 1432 aaPredicted RBP eCLIP17.2■□□□□ 0.34
GATB-214ENST00000515884 GRIN2BQ13224 1484 aa17.19■□□□□ 0.34
GATB-214ENST00000515884 SNAPC4Q5SXM2 1469 aa17.19■□□□□ 0.34
GATB-214ENST00000515884 GAPVD1Q14C86 1478 aa17.17■□□□□ 0.34
GATB-214ENST00000515884 MAGI1Q96QZ7 1491 aaPredicted RBP17.15■□□□□ 0.34
GATB-214ENST00000515884 PBRM1Q86U86 1689 aa17.13■□□□□ 0.33
GATB-214ENST00000515884 RIMBP3CA6NJZ7 1639 aa17.12■□□□□ 0.33
GATB-214ENST00000515884 RIMBP3BA6NNM3 1639 aa17.12■□□□□ 0.33
GATB-214ENST00000515884 RIMBP3Q9UFD9 1639 aa17.12■□□□□ 0.33
GATB-214ENST00000515884 SYNJ1O43426 1573 aa17.11■□□□□ 0.33
GATB-214ENST00000515884 ABCA10Q8WWZ4 1543 aa17.11■□□□□ 0.33
GATB-214ENST00000515884 TOP2BQ02880 1626 aa17.1■□□□□ 0.33
GATB-214ENST00000515884 CYB5RLQ6IPT4 315 aa17.09■□□□□ 0.33
GATB-214ENST00000515884 SYNJ2O15056 1496 aa17.09■□□□□ 0.33
GATB-214ENST00000515884 ARHGEF11O15085 1522 aa17.09■□□□□ 0.33
GATB-214ENST00000515884 BIVM-ERCC5R4GMW8 1640 aa17.09■□□□□ 0.33
GATB-214ENST00000515884 ABCA5Q8WWZ7 1642 aa17.03■□□□□ 0.32
GATB-214ENST00000515884 TRHP20396 242 aaPredicted RBP16.97■□□□□ 0.31
GATB-214ENST00000515884 FHAD1B1AJZ9 1412 aa16.96■□□□□ 0.3
GATB-214ENST00000515884 ERICH3Q5RHP9 1530 aa16.94■□□□□ 0.3
GATB-214ENST00000515884 GRIN2AQ12879 1464 aa16.93■□□□□ 0.3
GATB-214ENST00000515884 ADAMTS12P58397 1594 aa16.93■□□□□ 0.3
GATB-214ENST00000515884 CLASP1Q7Z460 1538 aa16.92■□□□□ 0.3
GATB-214ENST00000515884 KIF27Q86VH2 1401 aa16.9■□□□□ 0.3
GATB-214ENST00000515884 ARAP1Q96P48 1450 aa16.89■□□□□ 0.29
GATB-214ENST00000515884 CEP170Q5SW79 1584 aa16.81■□□□□ 0.28
GATB-214ENST00000515884 NUP160Q12769 1436 aa16.79■□□□□ 0.28
GATB-214ENST00000515884 CUL7Q14999 1698 aa16.78■□□□□ 0.28
GATB-214ENST00000515884 JPH4Q96JJ6 628 aa16.77■□□□□ 0.28
GATB-214ENST00000515884 NPM1P06748 294 aaKnown RBP eCLIP16.75■□□□□ 0.27
GATB-214ENST00000515884 PRG4Q92954 1404 aaPredicted RBP16.74■□□□□ 0.27
GATB-214ENST00000515884 IGF1RP08069 1367 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms