RNA–Protein interactions for RNA: ENST00000515790.1

CCNI-209, Transcript of cyclin I, humanhuman

TSL 2

Gene CCNI, Length 390 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNI-209ENST00000515790 NISCHQ9Y2I1 1504 aa27■■□□□ 1.91
CCNI-209ENST00000515790 CCDC180Q9P1Z9 1646 aa23.99■■□□□ 1.43
CCNI-209ENST00000515790 ABCC9O60706 1549 aa23.5■■□□□ 1.35
CCNI-209ENST00000515790 AEBP2Q6ZN18 517 aaPredicted RBP22.83■■□□□ 1.25
CCNI-209ENST00000515790 NACADO15069 1562 aa22.62■■□□□ 1.21
CCNI-209ENST00000515790 RB1CC1Q8TDY2 1594 aa22.62■■□□□ 1.21
CCNI-209ENST00000515790 MYO15BQ96JP2 1530 aa22.53■■□□□ 1.2
CCNI-209ENST00000515790 DCAF8L2P0C7V8 631 aa22.52■■□□□ 1.2
CCNI-209ENST00000515790 ZCCHC6Q5VYS8 1495 aaKnown RBP22.47■■□□□ 1.19
CCNI-209ENST00000515790 DCAF1Q9Y4B6 1507 aa22.4■■□□□ 1.18
CCNI-209ENST00000515790 UNC13AQ9UPW8 1703 aa22.03■■□□□ 1.12
CCNI-209ENST00000515790 PABPN1Q86U42 306 aaKnown RBP eCLIP21.99■■□□□ 1.11
CCNI-209ENST00000515790 BICRAQ9NZM4 1560 aa21.95■■□□□ 1.11
CCNI-209ENST00000515790 SCRIBQ14160 1630 aa21.82■■□□□ 1.08
CCNI-209ENST00000515790 SHROOM4Q9ULL8 1493 aa21.78■■□□□ 1.08
CCNI-209ENST00000515790 DNAJC5BQ9UF47 199 aa21.72■■□□□ 1.07
CCNI-209ENST00000515790 EIF4G1Q04637 1599 aaKnown RBP21.36■■□□□ 1.01
CCNI-209ENST00000515790 CC2D2AQ9P2K1 1620 aa21.27■■□□□ 1
CCNI-209ENST00000515790 CHIC1Q5VXU3 224 aa21.23■□□□□ 0.99
CCNI-209ENST00000515790 CECR2Q9BXF3 1484 aa21.16■□□□□ 0.98
CCNI-209ENST00000515790 NCAPD3P42695 1498 aa20.92■□□□□ 0.94
CCNI-209ENST00000515790 BAZ1AQ9NRL2 1556 aaPredicted RBP20.92■□□□□ 0.94
CCNI-209ENST00000515790 SMARCA4P51532 1647 aa20.92■□□□□ 0.94
CCNI-209ENST00000515790 ATAD2BQ9ULI0 1458 aa20.88■□□□□ 0.93
CCNI-209ENST00000515790 SMARCA2P51531 1590 aa20.83■□□□□ 0.92
CCNI-209ENST00000515790 PEG3Q9GZU2 1588 aa20.79■□□□□ 0.92
CCNI-209ENST00000515790 MROH2BQ7Z745 1585 aa20.78■□□□□ 0.92
CCNI-209ENST00000515790 HMGXB3Q12766 1538 aa20.74■□□□□ 0.91
CCNI-209ENST00000515790 BAZ1BQ9UIG0 1483 aaKnown RBP20.65■□□□□ 0.9
CCNI-209ENST00000515790 RSF1Q96T23 1441 aaPredicted RBP20.57■□□□□ 0.88
CCNI-209ENST00000515790 WIZO95785 1651 aa20.51■□□□□ 0.87
CCNI-209ENST00000515790 TOP2AP11388 1531 aaKnown RBP20.33■□□□□ 0.85
CCNI-209ENST00000515790 NESP48681 1621 aa20.33■□□□□ 0.84
CCNI-209ENST00000515790 LAMC3Q9Y6N6 1575 aa20.31■□□□□ 0.84
CCNI-209ENST00000515790 CADPSQ9ULU8 1353 aa20.29■□□□□ 0.84
CCNI-209ENST00000515790 ERCC6Q03468 1493 aa20.25■□□□□ 0.83
CCNI-209ENST00000515790 PDS5BQ9NTI5 1447 aa20.2■□□□□ 0.82
CCNI-209ENST00000515790 CFTRP13569 1480 aa20.15■□□□□ 0.82
CCNI-209ENST00000515790 CUX2O14529 1486 aa20.13■□□□□ 0.81
CCNI-209ENST00000515790 CCDC88BA6NC98 1476 aa20.11■□□□□ 0.81
CCNI-209ENST00000515790 KIF21AQ7Z4S6 1674 aa20.03■□□□□ 0.8
CCNI-209ENST00000515790 THOC2Q8NI27 1593 aaKnown RBP20.03■□□□□ 0.8
CCNI-209ENST00000515790 FANCD2Q9BXW9 1451 aa19.99■□□□□ 0.79
CCNI-209ENST00000515790 CEP164Q9UPV0 1460 aa19.97■□□□□ 0.79
CCNI-209ENST00000515790 MRC2Q9UBG0 1479 aa19.96■□□□□ 0.79
CCNI-209ENST00000515790 SUPT5HO00267 1087 aaKnown RBP19.92■□□□□ 0.78
CCNI-209ENST00000515790 WDR62O43379 1518 aa19.91■□□□□ 0.78
CCNI-209ENST00000515790 PRDM2Q13029 1718 aa19.86■□□□□ 0.77
CCNI-209ENST00000515790 DNAJC5Q9H3Z4 198 aa19.85■□□□□ 0.77
CCNI-209ENST00000515790 URB2Q14146 1524 aaKnown RBP19.81■□□□□ 0.76
CCNI-209ENST00000515790 ABCC8Q09428 1581 aa19.72■□□□□ 0.75
CCNI-209ENST00000515790 TOPBP1Q92547 1522 aa19.67■□□□□ 0.74
CCNI-209ENST00000515790 DNMBPQ6XZF7 1577 aa19.63■□□□□ 0.73
CCNI-209ENST00000515790 SENP3Q9H4L4 574 aaPredicted RBP19.62■□□□□ 0.73
CCNI-209ENST00000515790 IFT140Q96RY7 1462 aa19.59■□□□□ 0.73
CCNI-209ENST00000515790 POTEDQ86YR6 584 aa19.55■□□□□ 0.72
CCNI-209ENST00000515790 POLA1P09884 1462 aaPredicted RBP19.5■□□□□ 0.71
CCNI-209ENST00000515790 CUX1P39880 1505 aa19.5■□□□□ 0.71
CCNI-209ENST00000515790 ZNF608Q9ULD9 1512 aaPredicted RBP19.47■□□□□ 0.71
CCNI-209ENST00000515790 TARBP1Q13395 1621 aaKnown RBP19.46■□□□□ 0.71
CCNI-209ENST00000515790 SOGA1O94964 1423 aa19.44■□□□□ 0.7
CCNI-209ENST00000515790 FGD5Q6ZNL6 1462 aa19.43■□□□□ 0.7
CCNI-209ENST00000515790 RAD54L2Q9Y4B4 1467 aa19.41■□□□□ 0.7
CCNI-209ENST00000515790 AQRO60306 1485 aaKnown RBP eCLIP19.36■□□□□ 0.69
CCNI-209ENST00000515790 WRNQ14191 1432 aaPredicted RBP eCLIP19.36■□□□□ 0.69
CCNI-209ENST00000515790 EIF4G3O43432 1585 aaKnown RBP19.35■□□□□ 0.69
CCNI-209ENST00000515790 WDR97A6NE52 1622 aa19.34■□□□□ 0.69
CCNI-209ENST00000515790 TDRD9Q8NDG6 1382 aaKnown RBP19.32■□□□□ 0.68
CCNI-209ENST00000515790 OSCARQ8IYS5 282 aa19.32■□□□□ 0.68
CCNI-209ENST00000515790 TOP2BQ02880 1626 aa19.32■□□□□ 0.68
CCNI-209ENST00000515790 BIVM-ERCC5R4GMW8 1640 aa19.29■□□□□ 0.68
CCNI-209ENST00000515790 ABCA10Q8WWZ4 1543 aa19.28■□□□□ 0.68
CCNI-209ENST00000515790 SYNJ1O43426 1573 aa19.27■□□□□ 0.68
CCNI-209ENST00000515790 GRIN2BQ13224 1484 aa19.22■□□□□ 0.67
CCNI-209ENST00000515790 GAPVD1Q14C86 1478 aa19.21■□□□□ 0.67
CCNI-209ENST00000515790 PHF23Q9BUL5 403 aaPredicted RBP19.2■□□□□ 0.66
CCNI-209ENST00000515790 MAGI1Q96QZ7 1491 aaPredicted RBP19.17■□□□□ 0.66
CCNI-209ENST00000515790 ABCA5Q8WWZ7 1642 aa19.17■□□□□ 0.66
CCNI-209ENST00000515790 SNAPC4Q5SXM2 1469 aa19.16■□□□□ 0.66
CCNI-209ENST00000515790 FBLN2P98095 1184 aa19.11■□□□□ 0.65
CCNI-209ENST00000515790 SYNJ2O15056 1496 aa19.1■□□□□ 0.65
CCNI-209ENST00000515790 CHMP7Q8WUX9 453 aaPredicted RBP19.1■□□□□ 0.65
CCNI-209ENST00000515790 CHD1O14646 1710 aa19.08■□□□□ 0.64
CCNI-209ENST00000515790 PBRM1Q86U86 1689 aa19.08■□□□□ 0.64
CCNI-209ENST00000515790 ERICH3Q5RHP9 1530 aa19.05■□□□□ 0.64
CCNI-209ENST00000515790 FHAD1B1AJZ9 1412 aa19■□□□□ 0.63
CCNI-209ENST00000515790 KIF27Q86VH2 1401 aa18.98■□□□□ 0.63
CCNI-209ENST00000515790 ADAMTS12P58397 1594 aa18.97■□□□□ 0.63
CCNI-209ENST00000515790 CLASP1Q7Z460 1538 aa18.96■□□□□ 0.63
CCNI-209ENST00000515790 GRIN2AQ12879 1464 aa18.96■□□□□ 0.63
CCNI-209ENST00000515790 IGF1RP08069 1367 aa18.95■□□□□ 0.62
CCNI-209ENST00000515790 ARHGEF11O15085 1522 aa18.94■□□□□ 0.62
CCNI-209ENST00000515790 RIMBP3CA6NJZ7 1639 aa18.92■□□□□ 0.62
CCNI-209ENST00000515790 RIMBP3BA6NNM3 1639 aa18.92■□□□□ 0.62
CCNI-209ENST00000515790 RIMBP3Q9UFD9 1639 aa18.92■□□□□ 0.62
CCNI-209ENST00000515790 NUP160Q12769 1436 aa18.91■□□□□ 0.62
CCNI-209ENST00000515790 TRIM41Q8WV44 630 aa18.87■□□□□ 0.61
CCNI-209ENST00000515790 CEP170Q5SW79 1584 aa18.84■□□□□ 0.61
CCNI-209ENST00000515790 CUL7Q14999 1698 aa18.81■□□□□ 0.6
CCNI-209ENST00000515790 CARMIL1Q5VZK9 1371 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms