RNA–Protein interactions for RNA: ENST00000515720.1

AC109588.1-202, humanhuman

TSL 3 BASIC

Gene AC109588.1, Length 880 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC109588.1-202ENST00000515720 AEBP2Q6ZN18 517 aaPredicted RBP23.36■■□□□ 1.33
AC109588.1-202ENST00000515720 CHIC1Q5VXU3 224 aa21.89■■□□□ 1.09
AC109588.1-202ENST00000515720 NISCHQ9Y2I1 1504 aa21.29■■□□□ 1
AC109588.1-202ENST00000515720 SENP3Q9H4L4 574 aaPredicted RBP20.05■□□□□ 0.8
AC109588.1-202ENST00000515720 PHF23Q9BUL5 403 aaPredicted RBP19.73■□□□□ 0.75
AC109588.1-202ENST00000515720 CCDC180Q9P1Z9 1646 aa18.89■□□□□ 0.61
AC109588.1-202ENST00000515720 FOXD1Q16676 465 aa18.72■□□□□ 0.59
AC109588.1-202ENST00000515720 ABCC9O60706 1549 aa18.52■□□□□ 0.56
AC109588.1-202ENST00000515720 POTEDQ86YR6 584 aa18.09■□□□□ 0.49
AC109588.1-202ENST00000515720 NACADO15069 1562 aa17.8■□□□□ 0.44
AC109588.1-202ENST00000515720 RB1CC1Q8TDY2 1594 aa17.79■□□□□ 0.44
AC109588.1-202ENST00000515720 MYO15BQ96JP2 1530 aa17.74■□□□□ 0.43
AC109588.1-202ENST00000515720 ZCCHC6Q5VYS8 1495 aaKnown RBP17.74■□□□□ 0.43
AC109588.1-202ENST00000515720 MSH5O43196 834 aa17.73■□□□□ 0.43
AC109588.1-202ENST00000515720 DCAF8L2P0C7V8 631 aa17.71■□□□□ 0.43
AC109588.1-202ENST00000515720 DCAF1Q9Y4B6 1507 aa17.64■□□□□ 0.41
AC109588.1-202ENST00000515720 PIAS4Q8N2W9 510 aaPredicted RBP17.44■□□□□ 0.38
AC109588.1-202ENST00000515720 UNC13AQ9UPW8 1703 aa17.37■□□□□ 0.37
AC109588.1-202ENST00000515720 PABPN1Q86U42 306 aaKnown RBP eCLIP17.33■□□□□ 0.36
AC109588.1-202ENST00000515720 BICRAQ9NZM4 1560 aa17.32■□□□□ 0.36
AC109588.1-202ENST00000515720 SCRIBQ14160 1630 aa17.22■□□□□ 0.35
AC109588.1-202ENST00000515720 PLPPR3Q6T4P5 718 aa17.2■□□□□ 0.34
AC109588.1-202ENST00000515720 PPP6R1Q9UPN7 881 aa17.14■□□□□ 0.33
AC109588.1-202ENST00000515720 SHROOM4Q9ULL8 1493 aa17.13■□□□□ 0.33
AC109588.1-202ENST00000515720 DNAJC5BQ9UF47 199 aa17.11■□□□□ 0.33
AC109588.1-202ENST00000515720 ADRA2BP18089 450 aa17.1■□□□□ 0.33
AC109588.1-202ENST00000515720 EIF4G1Q04637 1599 aaKnown RBP16.84■□□□□ 0.29
AC109588.1-202ENST00000515720 CC2D2AQ9P2K1 1620 aa16.75■□□□□ 0.27
AC109588.1-202ENST00000515720 CECR2Q9BXF3 1484 aa16.66■□□□□ 0.26
AC109588.1-202ENST00000515720 SMARCA4P51532 1647 aa16.5■□□□□ 0.23
AC109588.1-202ENST00000515720 BAZ1AQ9NRL2 1556 aaPredicted RBP16.48■□□□□ 0.23
AC109588.1-202ENST00000515720 NCAPD3P42695 1498 aa16.47■□□□□ 0.23
AC109588.1-202ENST00000515720 ATAD2BQ9ULI0 1458 aa16.46■□□□□ 0.23
AC109588.1-202ENST00000515720 MROH2BQ7Z745 1585 aa16.4■□□□□ 0.22
AC109588.1-202ENST00000515720 SMARCA2P51531 1590 aa16.39■□□□□ 0.21
AC109588.1-202ENST00000515720 PEG3Q9GZU2 1588 aa16.38■□□□□ 0.21
AC109588.1-202ENST00000515720 HMGXB3Q12766 1538 aa16.35■□□□□ 0.21
AC109588.1-202ENST00000515720 BAZ1BQ9UIG0 1483 aaKnown RBP16.28■□□□□ 0.2
AC109588.1-202ENST00000515720 RSF1Q96T23 1441 aaPredicted RBP16.23■□□□□ 0.19
AC109588.1-202ENST00000515720 WIZO95785 1651 aa16.18■□□□□ 0.18
AC109588.1-202ENST00000515720 NESP48681 1621 aa16.04■□□□□ 0.16
AC109588.1-202ENST00000515720 TOP2AP11388 1531 aaKnown RBP16.04■□□□□ 0.16
AC109588.1-202ENST00000515720 LAMC3Q9Y6N6 1575 aa15.98■□□□□ 0.15
AC109588.1-202ENST00000515720 CADPSQ9ULU8 1353 aa15.97■□□□□ 0.15
AC109588.1-202ENST00000515720 ERCC6Q03468 1493 aa15.93■□□□□ 0.14
AC109588.1-202ENST00000515720 PDS5BQ9NTI5 1447 aa15.89■□□□□ 0.13
AC109588.1-202ENST00000515720 CFTRP13569 1480 aa15.88■□□□□ 0.13
AC109588.1-202ENST00000515720 CCDC88BA6NC98 1476 aa15.87■□□□□ 0.13
AC109588.1-202ENST00000515720 MAPK8IP2Q13387 824 aaPredicted RBP15.85■□□□□ 0.13
AC109588.1-202ENST00000515720 CUX2O14529 1486 aa15.84■□□□□ 0.13
AC109588.1-202ENST00000515720 DMRT2Q9Y5R5 561 aa15.8■□□□□ 0.12
AC109588.1-202ENST00000515720 KIF21AQ7Z4S6 1674 aa15.79■□□□□ 0.12
AC109588.1-202ENST00000515720 THOC2Q8NI27 1593 aaKnown RBP15.79■□□□□ 0.12
AC109588.1-202ENST00000515720 FANCD2Q9BXW9 1451 aa15.76■□□□□ 0.11
AC109588.1-202ENST00000515720 MRC2Q9UBG0 1479 aa15.72■□□□□ 0.11
AC109588.1-202ENST00000515720 CEP164Q9UPV0 1460 aa15.71■□□□□ 0.11
AC109588.1-202ENST00000515720 SUPT5HO00267 1087 aaKnown RBP15.71■□□□□ 0.11
AC109588.1-202ENST00000515720 SCAF1Q9H7N4 1312 aaKnown RBP15.69■□□□□ 0.1
AC109588.1-202ENST00000515720 WDR62O43379 1518 aa15.68■□□□□ 0.1
AC109588.1-202ENST00000515720 PRDM2Q13029 1718 aa15.64■□□□□ 0.09
AC109588.1-202ENST00000515720 URB2Q14146 1524 aaKnown RBP15.62■□□□□ 0.09
AC109588.1-202ENST00000515720 CACNB1Q02641 598 aaPredicted RBP15.57■□□□□ 0.08
AC109588.1-202ENST00000515720 TOPBP1Q92547 1522 aa15.51■□□□□ 0.07
AC109588.1-202ENST00000515720 ABCC8Q09428 1581 aa15.49■□□□□ 0.07
AC109588.1-202ENST00000515720 DNMBPQ6XZF7 1577 aa15.47■□□□□ 0.07
AC109588.1-202ENST00000515720 IFT140Q96RY7 1462 aa15.42■□□□□ 0.06
AC109588.1-202ENST00000515720 DNAJC5Q9H3Z4 198 aa15.41■□□□□ 0.06
AC109588.1-202ENST00000515720 CUX1P39880 1505 aa15.39■□□□□ 0.05
AC109588.1-202ENST00000515720 POLA1P09884 1462 aaPredicted RBP15.38■□□□□ 0.05
AC109588.1-202ENST00000515720 ZNF608Q9ULD9 1512 aaPredicted RBP15.36■□□□□ 0.05
AC109588.1-202ENST00000515720 TARBP1Q13395 1621 aaKnown RBP15.35■□□□□ 0.05
AC109588.1-202ENST00000515720 DCAF8L1A6NGE4 600 aa15.32■□□□□ 0.04
AC109588.1-202ENST00000515720 FGD5Q6ZNL6 1462 aa15.32■□□□□ 0.04
AC109588.1-202ENST00000515720 SOGA1O94964 1423 aa15.31■□□□□ 0.04
AC109588.1-202ENST00000515720 RAD54L2Q9Y4B4 1467 aa15.31■□□□□ 0.04
AC109588.1-202ENST00000515720 AQRO60306 1485 aaKnown RBP eCLIP15.27■□□□□ 0.03
AC109588.1-202ENST00000515720 WRNQ14191 1432 aaPredicted RBP eCLIP15.26■□□□□ 0.03
AC109588.1-202ENST00000515720 EIF4G3O43432 1585 aaKnown RBP15.25■□□□□ 0.03
AC109588.1-202ENST00000515720 TOP2BQ02880 1626 aa15.23■□□□□ 0.03
AC109588.1-202ENST00000515720 SYNJ1O43426 1573 aa15.23■□□□□ 0.03
AC109588.1-202ENST00000515720 TDRD9Q8NDG6 1382 aaKnown RBP15.23■□□□□ 0.03
AC109588.1-202ENST00000515720 WDR97A6NE52 1622 aa15.21■□□□□ 0.03
AC109588.1-202ENST00000515720 BIVM-ERCC5R4GMW8 1640 aa15.21■□□□□ 0.03
AC109588.1-202ENST00000515720 ABCA10Q8WWZ4 1543 aa15.2■□□□□ 0.02
AC109588.1-202ENST00000515720 OSCARQ8IYS5 282 aa15.17■□□□□ 0.02
AC109588.1-202ENST00000515720 GRIN2BQ13224 1484 aa15.13■□□□□ 0.01
AC109588.1-202ENST00000515720 GAPVD1Q14C86 1478 aa15.13■□□□□ 0.01
AC109588.1-202ENST00000515720 ABCA5Q8WWZ7 1642 aa15.11■□□□□ 0.01
AC109588.1-202ENST00000515720 SNAPC4Q5SXM2 1469 aa15.11■□□□□ 0.01
AC109588.1-202ENST00000515720 MAGI1Q96QZ7 1491 aaPredicted RBP15.09■□□□□ 0.01
AC109588.1-202ENST00000515720 RNF39Q9H2S5 420 aa15.06■□□□□ 0
AC109588.1-202ENST00000515720 PBRM1Q86U86 1689 aa15.04■□□□□ -0
AC109588.1-202ENST00000515720 CHD1O14646 1710 aa15.03■□□□□ -0
AC109588.1-202ENST00000515720 SYNJ2O15056 1496 aa15.03■□□□□ -0
AC109588.1-202ENST00000515720 FBLN2P98095 1184 aa15.02■□□□□ -0
AC109588.1-202ENST00000515720 PPP4R3CPQ6ZMV5 832 aa15.02■□□□□ -0
AC109588.1-202ENST00000515720 HOXD11P31277 338 aaPredicted RBP15.01□□□□□ -0.01
AC109588.1-202ENST00000515720 CHMP7Q8WUX9 453 aaPredicted RBP15.01□□□□□ -0.01
AC109588.1-202ENST00000515720 ERICH3Q5RHP9 1530 aa15□□□□□ -0.01
AC109588.1-202ENST00000515720 ADAMTS12P58397 1594 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms