RNA–Protein interactions for RNA: ENST00000515653.1

TMCO6-214, Transcript of transmembrane and coiled-coil domains 6, humanhuman

TSL 3

Gene TMCO6, Length 611 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO6-214ENST00000515653 NISCHQ9Y2I1 1504 aa31.34■■■□□ 2.61
TMCO6-214ENST00000515653 CCDC180Q9P1Z9 1646 aa28.21■■■□□ 2.11
TMCO6-214ENST00000515653 ABCC9O60706 1549 aa28.15■■■□□ 2.1
TMCO6-214ENST00000515653 RB1CC1Q8TDY2 1594 aa26.79■■□□□ 1.88
TMCO6-214ENST00000515653 NACADO15069 1562 aa26.59■■□□□ 1.85
TMCO6-214ENST00000515653 DNAJC5BQ9UF47 199 aa26.43■■□□□ 1.82
TMCO6-214ENST00000515653 UNC13AQ9UPW8 1703 aa26.34■■□□□ 1.81
TMCO6-214ENST00000515653 DCAF8L2P0C7V8 631 aa26.26■■□□□ 1.79
TMCO6-214ENST00000515653 MYO15BQ96JP2 1530 aa26.24■■□□□ 1.79
TMCO6-214ENST00000515653 PABPN1Q86U42 306 aaKnown RBP eCLIP26.13■■□□□ 1.77
TMCO6-214ENST00000515653 BICRAQ9NZM4 1560 aa26.11■■□□□ 1.77
TMCO6-214ENST00000515653 ZCCHC6Q5VYS8 1495 aaKnown RBP26.01■■□□□ 1.75
TMCO6-214ENST00000515653 DCAF1Q9Y4B6 1507 aa25.89■■□□□ 1.74
TMCO6-214ENST00000515653 SCRIBQ14160 1630 aa25.66■■□□□ 1.7
TMCO6-214ENST00000515653 SHROOM4Q9ULL8 1493 aa25.66■■□□□ 1.7
TMCO6-214ENST00000515653 CC2D2AQ9P2K1 1620 aa25.48■■□□□ 1.67
TMCO6-214ENST00000515653 EIF4G1Q04637 1599 aaKnown RBP25.41■■□□□ 1.66
TMCO6-214ENST00000515653 CECR2Q9BXF3 1484 aa25.34■■□□□ 1.65
TMCO6-214ENST00000515653 NCAPD3P42695 1498 aa24.54■■□□□ 1.52
TMCO6-214ENST00000515653 SMARCA4P51532 1647 aa24.5■■□□□ 1.51
TMCO6-214ENST00000515653 ATAD2BQ9ULI0 1458 aa24.48■■□□□ 1.51
TMCO6-214ENST00000515653 HMGXB3Q12766 1538 aa24.4■■□□□ 1.5
TMCO6-214ENST00000515653 SMARCA2P51531 1590 aa24.39■■□□□ 1.5
TMCO6-214ENST00000515653 BAZ1AQ9NRL2 1556 aaPredicted RBP24.32■■□□□ 1.48
TMCO6-214ENST00000515653 PEG3Q9GZU2 1588 aa24.27■■□□□ 1.48
TMCO6-214ENST00000515653 CUX2O14529 1486 aa24.26■■□□□ 1.47
TMCO6-214ENST00000515653 ERCC6Q03468 1493 aa24.24■■□□□ 1.47
TMCO6-214ENST00000515653 NESP48681 1621 aa24.21■■□□□ 1.47
TMCO6-214ENST00000515653 BAZ1BQ9UIG0 1483 aaKnown RBP24.21■■□□□ 1.47
TMCO6-214ENST00000515653 DNAJC5Q9H3Z4 198 aa24.21■■□□□ 1.47
TMCO6-214ENST00000515653 MROH2BQ7Z745 1585 aa24.17■■□□□ 1.46
TMCO6-214ENST00000515653 THOC2Q8NI27 1593 aaKnown RBP24.04■■□□□ 1.44
TMCO6-214ENST00000515653 LAMC3Q9Y6N6 1575 aa24.02■■□□□ 1.44
TMCO6-214ENST00000515653 KIF21AQ7Z4S6 1674 aa23.96■■□□□ 1.43
TMCO6-214ENST00000515653 WIZO95785 1651 aa23.92■■□□□ 1.42
TMCO6-214ENST00000515653 PDS5BQ9NTI5 1447 aa23.79■■□□□ 1.4
TMCO6-214ENST00000515653 CADPSQ9ULU8 1353 aa23.75■■□□□ 1.39
TMCO6-214ENST00000515653 MRC2Q9UBG0 1479 aa23.66■■□□□ 1.38
TMCO6-214ENST00000515653 WDR62O43379 1518 aa23.65■■□□□ 1.38
TMCO6-214ENST00000515653 RSF1Q96T23 1441 aaPredicted RBP23.61■■□□□ 1.37
TMCO6-214ENST00000515653 TOP2AP11388 1531 aaKnown RBP23.58■■□□□ 1.36
TMCO6-214ENST00000515653 CEP164Q9UPV0 1460 aa23.55■■□□□ 1.36
TMCO6-214ENST00000515653 CFTRP13569 1480 aa23.52■■□□□ 1.36
TMCO6-214ENST00000515653 FANCD2Q9BXW9 1451 aa23.52■■□□□ 1.36
TMCO6-214ENST00000515653 PRDM2Q13029 1718 aa23.41■■□□□ 1.34
TMCO6-214ENST00000515653 URB2Q14146 1524 aaKnown RBP23.38■■□□□ 1.33
TMCO6-214ENST00000515653 CCDC88BA6NC98 1476 aa23.27■■□□□ 1.32
TMCO6-214ENST00000515653 TOPBP1Q92547 1522 aa23.1■■□□□ 1.29
TMCO6-214ENST00000515653 TRIM41Q8WV44 630 aa23.1■■□□□ 1.29
TMCO6-214ENST00000515653 ZNF608Q9ULD9 1512 aaPredicted RBP23.08■■□□□ 1.29
TMCO6-214ENST00000515653 IFT140Q96RY7 1462 aa23.06■■□□□ 1.28
TMCO6-214ENST00000515653 DNMBPQ6XZF7 1577 aa23.02■■□□□ 1.28
TMCO6-214ENST00000515653 OSCARQ8IYS5 282 aa23.02■■□□□ 1.28
TMCO6-214ENST00000515653 EIF4G3O43432 1585 aaKnown RBP23■■□□□ 1.27
TMCO6-214ENST00000515653 ABCC8Q09428 1581 aa22.97■■□□□ 1.27
TMCO6-214ENST00000515653 TARBP1Q13395 1621 aaKnown RBP22.95■■□□□ 1.26
TMCO6-214ENST00000515653 RIMBP3CA6NJZ7 1639 aa22.93■■□□□ 1.26
TMCO6-214ENST00000515653 RIMBP3BA6NNM3 1639 aa22.93■■□□□ 1.26
TMCO6-214ENST00000515653 RIMBP3Q9UFD9 1639 aa22.93■■□□□ 1.26
TMCO6-214ENST00000515653 POLA1P09884 1462 aaPredicted RBP22.86■■□□□ 1.25
TMCO6-214ENST00000515653 CHD1O14646 1710 aa22.85■■□□□ 1.25
TMCO6-214ENST00000515653 AQRO60306 1485 aaKnown RBP eCLIP22.82■■□□□ 1.242e-6■■■■□ 24.5
TMCO6-214ENST00000515653 ARHGEF11O15085 1522 aa22.82■■□□□ 1.24
TMCO6-214ENST00000515653 RAD54L2Q9Y4B4 1467 aa22.77■■□□□ 1.24
TMCO6-214ENST00000515653 FGD5Q6ZNL6 1462 aa22.72■■□□□ 1.23
TMCO6-214ENST00000515653 CUX1P39880 1505 aa22.72■■□□□ 1.23
TMCO6-214ENST00000515653 SOGA1O94964 1423 aa22.68■■□□□ 1.22
TMCO6-214ENST00000515653 WDR97A6NE52 1622 aa22.68■■□□□ 1.22
TMCO6-214ENST00000515653 TDRD9Q8NDG6 1382 aaKnown RBP22.65■■□□□ 1.22
TMCO6-214ENST00000515653 SNAPC4Q5SXM2 1469 aa22.62■■□□□ 1.21
TMCO6-214ENST00000515653 ARAP1Q96P48 1450 aa22.6■■□□□ 1.21
TMCO6-214ENST00000515653 CLASP1Q7Z460 1538 aa22.57■■□□□ 1.2
TMCO6-214ENST00000515653 PBRM1Q86U86 1689 aa22.55■■□□□ 1.2
TMCO6-214ENST00000515653 FBLN2P98095 1184 aa22.55■■□□□ 1.2
TMCO6-214ENST00000515653 MAGI1Q96QZ7 1491 aaPredicted RBP22.54■■□□□ 1.2
TMCO6-214ENST00000515653 GRIN2BQ13224 1484 aa22.52■■□□□ 1.2
TMCO6-214ENST00000515653 CYB5RLQ6IPT4 315 aa22.51■■□□□ 1.19
TMCO6-214ENST00000515653 ABCA5Q8WWZ7 1642 aa22.49■■□□□ 1.19
TMCO6-214ENST00000515653 SYNJ1O43426 1573 aa22.49■■□□□ 1.19
TMCO6-214ENST00000515653 SYNJ2O15056 1496 aa22.47■■□□□ 1.19
TMCO6-214ENST00000515653 ABCA10Q8WWZ4 1543 aa22.45■■□□□ 1.18
TMCO6-214ENST00000515653 GAPVD1Q14C86 1478 aa22.43■■□□□ 1.18
TMCO6-214ENST00000515653 SUPT5HO00267 1087 aaKnown RBP22.42■■□□□ 1.18
TMCO6-214ENST00000515653 CHMP7Q8WUX9 453 aaPredicted RBP22.39■■□□□ 1.17
TMCO6-214ENST00000515653 BIVM-ERCC5R4GMW8 1640 aa22.39■■□□□ 1.17
TMCO6-214ENST00000515653 TOP2BQ02880 1626 aa22.34■■□□□ 1.17
TMCO6-214ENST00000515653 ADAMTS12P58397 1594 aa22.31■■□□□ 1.16
TMCO6-214ENST00000515653 WRNQ14191 1432 aaPredicted RBP eCLIP22.27■■□□□ 1.16
TMCO6-214ENST00000515653 GRIN2AQ12879 1464 aa22.27■■□□□ 1.16
TMCO6-214ENST00000515653 CEP170Q5SW79 1584 aa22.25■■□□□ 1.15
TMCO6-214ENST00000515653 ERCC6L2Q5T890 1561 aa22.24■■□□□ 1.15
TMCO6-214ENST00000515653 TRHP20396 242 aaPredicted RBP22.23■■□□□ 1.15
TMCO6-214ENST00000515653 NUP160Q12769 1436 aa22.2■■□□□ 1.14
TMCO6-214ENST00000515653 SHROOM2Q13796 1616 aa22.17■■□□□ 1.14
TMCO6-214ENST00000515653 ERICH3Q5RHP9 1530 aa22.16■■□□□ 1.14
TMCO6-214ENST00000515653 FHAD1B1AJZ9 1412 aa22.14■■□□□ 1.14
TMCO6-214ENST00000515653 RUSC2Q8N2Y8 1516 aa22.01■■□□□ 1.11
TMCO6-214ENST00000515653 PRG4Q92954 1404 aaPredicted RBP21.92■■□□□ 1.1
TMCO6-214ENST00000515653 KIF13AQ9H1H9 1805 aa21.91■■□□□ 1.1
TMCO6-214ENST00000515653 CUL7Q14999 1698 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms