RNA–Protein interactions for RNA: ENST00000515483.5

TNPO1-210, Transcript of transportin 1, humanhuman

TSL 4

Gene TNPO1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-210ENST00000515483 NISCHQ9Y2I1 1504 aa38.03■■■■□ 3.68
TNPO1-210ENST00000515483 ABCC9O60706 1549 aa35.15■■■■□ 3.22
TNPO1-210ENST00000515483 CCDC180Q9P1Z9 1646 aa34.38■■■■□ 3.09
TNPO1-210ENST00000515483 DNAJC5BQ9UF47 199 aa33.64■■■□□ 2.98
TNPO1-210ENST00000515483 RB1CC1Q8TDY2 1594 aa33.14■■■□□ 2.9
TNPO1-210ENST00000515483 NACADO15069 1562 aa32.75■■■□□ 2.83
TNPO1-210ENST00000515483 PABPN1Q86U42 306 aaKnown RBP eCLIP32.66■■■□□ 2.82
TNPO1-210ENST00000515483 DCAF8L2P0C7V8 631 aa32.52■■■□□ 2.8
TNPO1-210ENST00000515483 UNC13AQ9UPW8 1703 aa32.21■■■□□ 2.75
TNPO1-210ENST00000515483 BICRAQ9NZM4 1560 aa32.14■■■□□ 2.74
TNPO1-210ENST00000515483 MYO15BQ96JP2 1530 aa32.08■■■□□ 2.73
TNPO1-210ENST00000515483 CECR2Q9BXF3 1484 aa31.77■■■□□ 2.68
TNPO1-210ENST00000515483 SHROOM4Q9ULL8 1493 aa31.74■■■□□ 2.67
TNPO1-210ENST00000515483 CC2D2AQ9P2K1 1620 aa31.67■■■□□ 2.66
TNPO1-210ENST00000515483 DNAJC5Q9H3Z4 198 aa31.5■■■□□ 2.63
TNPO1-210ENST00000515483 EIF4G1Q04637 1599 aaKnown RBP31.44■■■□□ 2.62
TNPO1-210ENST00000515483 DCAF1Q9Y4B6 1507 aa31.39■■■□□ 2.61
TNPO1-210ENST00000515483 ZCCHC6Q5VYS8 1495 aaKnown RBP31.34■■■□□ 2.61
TNPO1-210ENST00000515483 SCRIBQ14160 1630 aa31.27■■■□□ 2.6
TNPO1-210ENST00000515483 CUX2O14529 1486 aa30.63■■■□□ 2.49
TNPO1-210ENST00000515483 ERCC6Q03468 1493 aa30.45■■■□□ 2.47
TNPO1-210ENST00000515483 NCAPD3P42695 1498 aa30.28■■■□□ 2.44
TNPO1-210ENST00000515483 ATAD2BQ9ULI0 1458 aa30.05■■■□□ 2.4
TNPO1-210ENST00000515483 NESP48681 1621 aa29.96■■■□□ 2.39
TNPO1-210ENST00000515483 SMARCA2P51531 1590 aa29.94■■■□□ 2.38
TNPO1-210ENST00000515483 HMGXB3Q12766 1538 aa29.93■■■□□ 2.38
TNPO1-210ENST00000515483 TRIM41Q8WV44 630 aa29.8■■■□□ 2.36
TNPO1-210ENST00000515483 SMARCA4P51532 1647 aa29.78■■■□□ 2.36
TNPO1-210ENST00000515483 THOC2Q8NI27 1593 aaKnown RBP29.75■■■□□ 2.35
TNPO1-210ENST00000515483 BAZ1BQ9UIG0 1483 aaKnown RBP29.73■■■□□ 2.35
TNPO1-210ENST00000515483 LAMC3Q9Y6N6 1575 aa29.66■■■□□ 2.34
TNPO1-210ENST00000515483 PDS5BQ9NTI5 1447 aa29.61■■■□□ 2.33
TNPO1-210ENST00000515483 BAZ1AQ9NRL2 1556 aaPredicted RBP29.57■■■□□ 2.32
TNPO1-210ENST00000515483 PEG3Q9GZU2 1588 aa29.52■■■□□ 2.32
TNPO1-210ENST00000515483 KIF21AQ7Z4S6 1674 aa29.47■■■□□ 2.31
TNPO1-210ENST00000515483 CADPSQ9ULU8 1353 aa29.34■■■□□ 2.29
TNPO1-210ENST00000515483 MRC2Q9UBG0 1479 aa29.33■■■□□ 2.29
TNPO1-210ENST00000515483 MROH2BQ7Z745 1585 aa29.26■■■□□ 2.28
TNPO1-210ENST00000515483 WDR62O43379 1518 aa29.24■■■□□ 2.27
TNPO1-210ENST00000515483 OSCARQ8IYS5 282 aa29.2■■■□□ 2.26
TNPO1-210ENST00000515483 CEP164Q9UPV0 1460 aa29.07■■■□□ 2.24
TNPO1-210ENST00000515483 FANCD2Q9BXW9 1451 aa28.97■■■□□ 2.23
TNPO1-210ENST00000515483 WIZO95785 1651 aa28.83■■■□□ 2.21
TNPO1-210ENST00000515483 CFTRP13569 1480 aa28.82■■■□□ 2.2
TNPO1-210ENST00000515483 URB2Q14146 1524 aaKnown RBP28.74■■■□□ 2.19
TNPO1-210ENST00000515483 RIMBP3CA6NJZ7 1639 aa28.73■■■□□ 2.19
TNPO1-210ENST00000515483 RIMBP3BA6NNM3 1639 aa28.73■■■□□ 2.19
TNPO1-210ENST00000515483 RIMBP3Q9UFD9 1639 aa28.73■■■□□ 2.19
TNPO1-210ENST00000515483 ARHGEF11O15085 1522 aa28.61■■■□□ 2.17
TNPO1-210ENST00000515483 CYB5RLQ6IPT4 315 aa28.54■■■□□ 2.16
TNPO1-210ENST00000515483 IFT140Q96RY7 1462 aa28.53■■■□□ 2.16
TNPO1-210ENST00000515483 ZNF608Q9ULD9 1512 aaPredicted RBP28.5■■■□□ 2.15
TNPO1-210ENST00000515483 TRHP20396 242 aaPredicted RBP28.48■■■□□ 2.15
TNPO1-210ENST00000515483 TOP2AP11388 1531 aaKnown RBP28.48■■■□□ 2.15
TNPO1-210ENST00000515483 RSF1Q96T23 1441 aaPredicted RBP28.44■■■□□ 2.14
TNPO1-210ENST00000515483 TOPBP1Q92547 1522 aa28.32■■■□□ 2.12
TNPO1-210ENST00000515483 PRDM2Q13029 1718 aa28.31■■■□□ 2.12
TNPO1-210ENST00000515483 ABCC8Q09428 1581 aa28.28■■■□□ 2.12
TNPO1-210ENST00000515483 ARAP1Q96P48 1450 aa28.27■■■□□ 2.12
TNPO1-210ENST00000515483 EIF4G3O43432 1585 aaKnown RBP28.27■■■□□ 2.12
TNPO1-210ENST00000515483 FBLN2P98095 1184 aa28.23■■■□□ 2.11
TNPO1-210ENST00000515483 AEBP2Q6ZN18 517 aaPredicted RBP28.22■■■□□ 2.11
TNPO1-210ENST00000515483 AQRO60306 1485 aaKnown RBP eCLIP28.2■■■□□ 2.16e-8■■■■■ 35.6
TNPO1-210ENST00000515483 CCDC88BA6NC98 1476 aa28.19■■■□□ 2.1
TNPO1-210ENST00000515483 CHD1O14646 1710 aa28.15■■■□□ 2.1
TNPO1-210ENST00000515483 DNMBPQ6XZF7 1577 aa28.14■■■□□ 2.1
TNPO1-210ENST00000515483 TARBP1Q13395 1621 aaKnown RBP28.07■■■□□ 2.08
TNPO1-210ENST00000515483 POLA1P09884 1462 aaPredicted RBP27.98■■■□□ 2.07
TNPO1-210ENST00000515483 TDRD9Q8NDG6 1382 aaKnown RBP27.93■■■□□ 2.06
TNPO1-210ENST00000515483 CHMP7Q8WUX9 453 aaPredicted RBP27.92■■■□□ 2.06
TNPO1-210ENST00000515483 SOGA1O94964 1423 aa27.9■■■□□ 2.06
TNPO1-210ENST00000515483 RAD54L2Q9Y4B4 1467 aa27.89■■■□□ 2.05
TNPO1-210ENST00000515483 CLASP1Q7Z460 1538 aa27.88■■■□□ 2.05
TNPO1-210ENST00000515483 SNAPC4Q5SXM2 1469 aa27.87■■■□□ 2.05
TNPO1-210ENST00000515483 SYNJ1O43426 1573 aa27.84■■■□□ 2.05
TNPO1-210ENST00000515483 WDR97A6NE52 1622 aa27.79■■■□□ 2.04
TNPO1-210ENST00000515483 MAGI1Q96QZ7 1491 aaPredicted RBP27.79■■■□□ 2.04
TNPO1-210ENST00000515483 GRIN2BQ13224 1484 aa27.73■■■□□ 2.03
TNPO1-210ENST00000515483 SYNJ2O15056 1496 aa27.71■■■□□ 2.03
TNPO1-210ENST00000515483 GAPVD1Q14C86 1478 aa27.7■■■□□ 2.02
TNPO1-210ENST00000515483 FGD5Q6ZNL6 1462 aa27.7■■■□□ 2.02
TNPO1-210ENST00000515483 CUX1P39880 1505 aa27.54■■■□□ 2
TNPO1-210ENST00000515483 PBRM1Q86U86 1689 aa27.42■■□□□ 1.98
TNPO1-210ENST00000515483 ABCA10Q8WWZ4 1543 aa27.36■■□□□ 1.97
TNPO1-210ENST00000515483 ERCC6L2Q5T890 1561 aa27.36■■□□□ 1.97
TNPO1-210ENST00000515483 GRIN2AQ12879 1464 aa27.34■■□□□ 1.97
TNPO1-210ENST00000515483 ABCA5Q8WWZ7 1642 aa27.31■■□□□ 1.96
TNPO1-210ENST00000515483 CEP170Q5SW79 1584 aa27.3■■□□□ 1.96
TNPO1-210ENST00000515483 NUP160Q12769 1436 aa27.29■■□□□ 1.96
TNPO1-210ENST00000515483 SHROOM2Q13796 1616 aa27.18■■□□□ 1.94
TNPO1-210ENST00000515483 ADAMTS12P58397 1594 aa27.18■■□□□ 1.94
TNPO1-210ENST00000515483 WRNQ14191 1432 aaPredicted RBP eCLIP27.17■■□□□ 1.94
TNPO1-210ENST00000515483 FHAD1B1AJZ9 1412 aa27.16■■□□□ 1.94
TNPO1-210ENST00000515483 KIF13AQ9H1H9 1805 aa27.16■■□□□ 1.94
TNPO1-210ENST00000515483 FAM69CQ0P6D2 419 aa27.14■■□□□ 1.94
TNPO1-210ENST00000515483 PRG4Q92954 1404 aaPredicted RBP27.11■■□□□ 1.93
TNPO1-210ENST00000515483 NPM1P06748 294 aaKnown RBP eCLIP27.11■■□□□ 1.93
TNPO1-210ENST00000515483 JPH4Q96JJ6 628 aa27.09■■□□□ 1.93
TNPO1-210ENST00000515483 ABCC10Q5T3U5 1492 aa27.07■■□□□ 1.92
TNPO1-210ENST00000515483 KDM4FA0A1W2PPD8 638 aa27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms