RNA–Protein interactions for RNA: ENST00000514990.1

PLXND1-216, Transcript of plexin D1, humanhuman

TSL 2

Gene PLXND1, Length 1,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXND1-216ENST00000514990 NISCHQ9Y2I1 1504 aa30.17■■■□□ 2.42
PLXND1-216ENST00000514990 ABCC9O60706 1549 aa27.35■■□□□ 1.97
PLXND1-216ENST00000514990 CCDC180Q9P1Z9 1646 aa27.31■■□□□ 1.96
PLXND1-216ENST00000514990 RB1CC1Q8TDY2 1594 aa26■■□□□ 1.75
PLXND1-216ENST00000514990 DNAJC5BQ9UF47 199 aa25.77■■□□□ 1.72
PLXND1-216ENST00000514990 NACADO15069 1562 aa25.76■■□□□ 1.71
PLXND1-216ENST00000514990 UNC13AQ9UPW8 1703 aa25.64■■□□□ 1.7
PLXND1-216ENST00000514990 DCAF8L2P0C7V8 631 aa25.39■■□□□ 1.66
PLXND1-216ENST00000514990 PABPN1Q86U42 306 aaKnown RBP eCLIP25.34■■□□□ 1.65
PLXND1-216ENST00000514990 MYO15BQ96JP2 1530 aa25.31■■□□□ 1.64
PLXND1-216ENST00000514990 BICRAQ9NZM4 1560 aa25.29■■□□□ 1.64
PLXND1-216ENST00000514990 ZCCHC6Q5VYS8 1495 aaKnown RBP24.97■■□□□ 1.59
PLXND1-216ENST00000514990 DCAF1Q9Y4B6 1507 aa24.92■■□□□ 1.58
PLXND1-216ENST00000514990 SHROOM4Q9ULL8 1493 aa24.87■■□□□ 1.57
PLXND1-216ENST00000514990 SCRIBQ14160 1630 aa24.81■■□□□ 1.56
PLXND1-216ENST00000514990 CC2D2AQ9P2K1 1620 aa24.78■■□□□ 1.56
PLXND1-216ENST00000514990 EIF4G1Q04637 1599 aaKnown RBP24.66■■□□□ 1.54
PLXND1-216ENST00000514990 CECR2Q9BXF3 1484 aa24.65■■□□□ 1.54
PLXND1-216ENST00000514990 AEBP2Q6ZN18 517 aaPredicted RBP23.93■■□□□ 1.42
PLXND1-216ENST00000514990 DNAJC5Q9H3Z4 198 aa23.81■■□□□ 1.4
PLXND1-216ENST00000514990 NCAPD3P42695 1498 aa23.71■■□□□ 1.39
PLXND1-216ENST00000514990 CUX2O14529 1486 aa23.67■■□□□ 1.38
PLXND1-216ENST00000514990 SMARCA4P51532 1647 aa23.65■■□□□ 1.38
PLXND1-216ENST00000514990 ATAD2BQ9ULI0 1458 aa23.63■■□□□ 1.37
PLXND1-216ENST00000514990 ERCC6Q03468 1493 aa23.62■■□□□ 1.37
PLXND1-216ENST00000514990 HMGXB3Q12766 1538 aa23.6■■□□□ 1.37
PLXND1-216ENST00000514990 SMARCA2P51531 1590 aa23.6■■□□□ 1.37
PLXND1-216ENST00000514990 NESP48681 1621 aa23.46■■□□□ 1.35
PLXND1-216ENST00000514990 BAZ1AQ9NRL2 1556 aaPredicted RBP23.45■■□□□ 1.34
PLXND1-216ENST00000514990 PEG3Q9GZU2 1588 aa23.41■■□□□ 1.34
PLXND1-216ENST00000514990 BAZ1BQ9UIG0 1483 aaKnown RBP23.41■■□□□ 1.34
PLXND1-216ENST00000514990 THOC2Q8NI27 1593 aaKnown RBP23.36■■□□□ 1.33
PLXND1-216ENST00000514990 KIF21AQ7Z4S6 1674 aa23.32■■□□□ 1.32
PLXND1-216ENST00000514990 LAMC3Q9Y6N6 1575 aa23.3■■□□□ 1.32
PLXND1-216ENST00000514990 MROH2BQ7Z745 1585 aa23.25■■□□□ 1.31
PLXND1-216ENST00000514990 PDS5BQ9NTI5 1447 aa23.07■■□□□ 1.28
PLXND1-216ENST00000514990 WIZO95785 1651 aa23.04■■□□□ 1.28
PLXND1-216ENST00000514990 CADPSQ9ULU8 1353 aa22.95■■□□□ 1.26
PLXND1-216ENST00000514990 WDR62O43379 1518 aa22.93■■□□□ 1.26
PLXND1-216ENST00000514990 MRC2Q9UBG0 1479 aa22.93■■□□□ 1.26
PLXND1-216ENST00000514990 CEP164Q9UPV0 1460 aa22.8■■□□□ 1.24
PLXND1-216ENST00000514990 FANCD2Q9BXW9 1451 aa22.74■■□□□ 1.23
PLXND1-216ENST00000514990 PRDM2Q13029 1718 aa22.74■■□□□ 1.23
PLXND1-216ENST00000514990 CFTRP13569 1480 aa22.69■■□□□ 1.22
PLXND1-216ENST00000514990 TOP2AP11388 1531 aaKnown RBP22.68■■□□□ 1.22
PLXND1-216ENST00000514990 TRIM41Q8WV44 630 aa22.67■■□□□ 1.22
PLXND1-216ENST00000514990 RSF1Q96T23 1441 aaPredicted RBP22.64■■□□□ 1.21
PLXND1-216ENST00000514990 URB2Q14146 1524 aaKnown RBP22.61■■□□□ 1.21
PLXND1-216ENST00000514990 OSCARQ8IYS5 282 aa22.44■■□□□ 1.18
PLXND1-216ENST00000514990 RIMBP3CA6NJZ7 1639 aa22.38■■□□□ 1.17
PLXND1-216ENST00000514990 RIMBP3BA6NNM3 1639 aa22.38■■□□□ 1.17
PLXND1-216ENST00000514990 RIMBP3Q9UFD9 1639 aa22.38■■□□□ 1.17
PLXND1-216ENST00000514990 CCDC88BA6NC98 1476 aa22.37■■□□□ 1.17
PLXND1-216ENST00000514990 ZNF608Q9ULD9 1512 aaPredicted RBP22.34■■□□□ 1.17
PLXND1-216ENST00000514990 IFT140Q96RY7 1462 aa22.34■■□□□ 1.17
PLXND1-216ENST00000514990 TOPBP1Q92547 1522 aa22.31■■□□□ 1.16
PLXND1-216ENST00000514990 EIF4G3O43432 1585 aaKnown RBP22.3■■□□□ 1.16
PLXND1-216ENST00000514990 CHD1O14646 1710 aa22.26■■□□□ 1.15
PLXND1-216ENST00000514990 DNMBPQ6XZF7 1577 aa22.25■■□□□ 1.15
PLXND1-216ENST00000514990 ABCC8Q09428 1581 aa22.22■■□□□ 1.15
PLXND1-216ENST00000514990 ARHGEF11O15085 1522 aa22.21■■□□□ 1.15
PLXND1-216ENST00000514990 TARBP1Q13395 1621 aaKnown RBP22.2■■□□□ 1.15
PLXND1-216ENST00000514990 CHIC1Q5VXU3 224 aa22.15■■□□□ 1.14
PLXND1-216ENST00000514990 AQRO60306 1485 aaKnown RBP eCLIP22.07■■□□□ 1.12
PLXND1-216ENST00000514990 POLA1P09884 1462 aaPredicted RBP22.07■■□□□ 1.12
PLXND1-216ENST00000514990 ARAP1Q96P48 1450 aa21.98■■□□□ 1.11
PLXND1-216ENST00000514990 RAD54L2Q9Y4B4 1467 aa21.96■■□□□ 1.11
PLXND1-216ENST00000514990 WDR97A6NE52 1622 aa21.96■■□□□ 1.11
PLXND1-216ENST00000514990 CYB5RLQ6IPT4 315 aa21.94■■□□□ 1.1
PLXND1-216ENST00000514990 FGD5Q6ZNL6 1462 aa21.9■■□□□ 1.1
PLXND1-216ENST00000514990 FBLN2P98095 1184 aa21.9■■□□□ 1.1
PLXND1-216ENST00000514990 SOGA1O94964 1423 aa21.89■■□□□ 1.1
PLXND1-216ENST00000514990 CLASP1Q7Z460 1538 aa21.88■■□□□ 1.09
PLXND1-216ENST00000514990 SNAPC4Q5SXM2 1469 aa21.88■■□□□ 1.09
PLXND1-216ENST00000514990 TDRD9Q8NDG6 1382 aaKnown RBP21.87■■□□□ 1.09
PLXND1-216ENST00000514990 CUX1P39880 1505 aa21.87■■□□□ 1.09
PLXND1-216ENST00000514990 PBRM1Q86U86 1689 aa21.87■■□□□ 1.09
PLXND1-216ENST00000514990 SYNJ1O43426 1573 aa21.84■■□□□ 1.09
PLXND1-216ENST00000514990 MAGI1Q96QZ7 1491 aaPredicted RBP21.82■■□□□ 1.08
PLXND1-216ENST00000514990 GRIN2BQ13224 1484 aa21.77■■□□□ 1.07
PLXND1-216ENST00000514990 TRHP20396 242 aaPredicted RBP21.76■■□□□ 1.07
PLXND1-216ENST00000514990 SYNJ2O15056 1496 aa21.73■■□□□ 1.07
PLXND1-216ENST00000514990 ABCA5Q8WWZ7 1642 aa21.71■■□□□ 1.07
PLXND1-216ENST00000514990 SUPT5HO00267 1087 aaKnown RBP21.71■■□□□ 1.07
PLXND1-216ENST00000514990 CHMP7Q8WUX9 453 aaPredicted RBP21.71■■□□□ 1.07
PLXND1-216ENST00000514990 GAPVD1Q14C86 1478 aa21.67■■□□□ 1.06
PLXND1-216ENST00000514990 ABCA10Q8WWZ4 1543 aa21.64■■□□□ 1.05
PLXND1-216ENST00000514990 BIVM-ERCC5R4GMW8 1640 aa21.55■■□□□ 1.04
PLXND1-216ENST00000514990 ADAMTS12P58397 1594 aa21.55■■□□□ 1.04
PLXND1-216ENST00000514990 ERCC6L2Q5T890 1561 aa21.53■■□□□ 1.04
PLXND1-216ENST00000514990 GRIN2AQ12879 1464 aa21.52■■□□□ 1.03
PLXND1-216ENST00000514990 CEP170Q5SW79 1584 aa21.5■■□□□ 1.03
PLXND1-216ENST00000514990 TOP2BQ02880 1626 aa21.49■■□□□ 1.03
PLXND1-216ENST00000514990 SHROOM2Q13796 1616 aa21.47■■□□□ 1.03
PLXND1-216ENST00000514990 WRNQ14191 1432 aaPredicted RBP eCLIP21.45■■□□□ 1.02
PLXND1-216ENST00000514990 NUP160Q12769 1436 aa21.44■■□□□ 1.02
PLXND1-216ENST00000514990 KIF13AQ9H1H9 1805 aa21.41■■□□□ 1.02
PLXND1-216ENST00000514990 ERICH3Q5RHP9 1530 aa21.38■■□□□ 1.01
PLXND1-216ENST00000514990 FHAD1B1AJZ9 1412 aa21.37■■□□□ 1.01
PLXND1-216ENST00000514990 RUSC2Q8N2Y8 1516 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms