RNA–Protein interactions for RNA: ENST00000514781.1

CENPU-206, Transcript of centromere protein U, humanhuman

APPRIS ALT2 TSL 3

Gene CENPU, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPU-206ENST00000514781 NISCHQ9Y2I1 1504 aa38.2■■■■□ 3.71
CENPU-206ENST00000514781 CCDC180Q9P1Z9 1646 aa34.22■■■■□ 3.07
CENPU-206ENST00000514781 ABCC9O60706 1549 aa34.12■■■■□ 3.05
CENPU-206ENST00000514781 RB1CC1Q8TDY2 1594 aa32.47■■■□□ 2.79
CENPU-206ENST00000514781 NACADO15069 1562 aa32.26■■■□□ 2.75
CENPU-206ENST00000514781 DCAF8L2P0C7V8 631 aa32.23■■■□□ 2.75
CENPU-206ENST00000514781 UNC13AQ9UPW8 1703 aa31.88■■■□□ 2.69
CENPU-206ENST00000514781 PABPN1Q86U42 306 aaKnown RBP eCLIP31.78■■■□□ 2.68
CENPU-206ENST00000514781 DNAJC5BQ9UF47 199 aa31.78■■■□□ 2.68
CENPU-206ENST00000514781 MYO15BQ96JP2 1530 aa31.78■■■□□ 2.68
CENPU-206ENST00000514781 ZCCHC6Q5VYS8 1495 aaKnown RBP31.72■■■□□ 2.67
CENPU-206ENST00000514781 BICRAQ9NZM4 1560 aa31.56■■■□□ 2.64
CENPU-206ENST00000514781 DCAF1Q9Y4B6 1507 aa31.48■■■□□ 2.63
CENPU-206ENST00000514781 SCRIBQ14160 1630 aa31.31■■■□□ 2.6
CENPU-206ENST00000514781 SHROOM4Q9ULL8 1493 aa31■■■□□ 2.55
CENPU-206ENST00000514781 CC2D2AQ9P2K1 1620 aa30.81■■■□□ 2.52
CENPU-206ENST00000514781 EIF4G1Q04637 1599 aaKnown RBP30.76■■■□□ 2.52
CENPU-206ENST00000514781 CECR2Q9BXF3 1484 aa30.66■■■□□ 2.5
CENPU-206ENST00000514781 SMARCA4P51532 1647 aa29.82■■■□□ 2.36
CENPU-206ENST00000514781 ATAD2BQ9ULI0 1458 aa29.74■■■□□ 2.35
CENPU-206ENST00000514781 NCAPD3P42695 1498 aa29.74■■■□□ 2.35
CENPU-206ENST00000514781 SMARCA2P51531 1590 aa29.66■■■□□ 2.34
CENPU-206ENST00000514781 BAZ1AQ9NRL2 1556 aaPredicted RBP29.63■■■□□ 2.33
CENPU-206ENST00000514781 HMGXB3Q12766 1538 aa29.59■■■□□ 2.33
CENPU-206ENST00000514781 BAZ1BQ9UIG0 1483 aaKnown RBP29.49■■■□□ 2.31
CENPU-206ENST00000514781 MROH2BQ7Z745 1585 aa29.49■■■□□ 2.31
CENPU-206ENST00000514781 PEG3Q9GZU2 1588 aa29.43■■■□□ 2.3
CENPU-206ENST00000514781 ERCC6Q03468 1493 aa29.42■■■□□ 2.3
CENPU-206ENST00000514781 NESP48681 1621 aa29.38■■■□□ 2.29
CENPU-206ENST00000514781 CUX2O14529 1486 aa29.22■■■□□ 2.27
CENPU-206ENST00000514781 WIZO95785 1651 aa29.2■■■□□ 2.26
CENPU-206ENST00000514781 LAMC3Q9Y6N6 1575 aa29.09■■■□□ 2.25
CENPU-206ENST00000514781 KIF21AQ7Z4S6 1674 aa29.04■■■□□ 2.24
CENPU-206ENST00000514781 THOC2Q8NI27 1593 aaKnown RBP29.03■■■□□ 2.24
CENPU-206ENST00000514781 DNAJC5Q9H3Z4 198 aa28.96■■■□□ 2.23
CENPU-206ENST00000514781 RSF1Q96T23 1441 aaPredicted RBP28.89■■■□□ 2.22
CENPU-206ENST00000514781 PDS5BQ9NTI5 1447 aa28.88■■■□□ 2.21
CENPU-206ENST00000514781 CADPSQ9ULU8 1353 aa28.87■■■□□ 2.21
CENPU-206ENST00000514781 TOP2AP11388 1531 aaKnown RBP28.78■■■□□ 2.2
CENPU-206ENST00000514781 MRC2Q9UBG0 1479 aa28.69■■■□□ 2.18
CENPU-206ENST00000514781 CEP164Q9UPV0 1460 aa28.62■■■□□ 2.17
CENPU-206ENST00000514781 WDR62O43379 1518 aa28.62■■■□□ 2.17
CENPU-206ENST00000514781 FANCD2Q9BXW9 1451 aa28.6■■■□□ 2.17
CENPU-206ENST00000514781 CFTRP13569 1480 aa28.59■■■□□ 2.17
CENPU-206ENST00000514781 PRDM2Q13029 1718 aa28.45■■■□□ 2.14
CENPU-206ENST00000514781 CCDC88BA6NC98 1476 aa28.43■■■□□ 2.14
CENPU-206ENST00000514781 URB2Q14146 1524 aaKnown RBP28.38■■■□□ 2.13
CENPU-206ENST00000514781 TOPBP1Q92547 1522 aa28.09■■■□□ 2.09
CENPU-206ENST00000514781 ZNF608Q9ULD9 1512 aaPredicted RBP28.02■■■□□ 2.08
CENPU-206ENST00000514781 DNMBPQ6XZF7 1577 aa28.01■■■□□ 2.07
CENPU-206ENST00000514781 IFT140Q96RY7 1462 aa28■■■□□ 2.07
CENPU-206ENST00000514781 TRIM41Q8WV44 630 aa27.93■■■□□ 2.06
CENPU-206ENST00000514781 ABCC8Q09428 1581 aa27.93■■■□□ 2.06
CENPU-206ENST00000514781 EIF4G3O43432 1585 aaKnown RBP27.9■■■□□ 2.06
CENPU-206ENST00000514781 OSCARQ8IYS5 282 aa27.88■■■□□ 2.05
CENPU-206ENST00000514781 TARBP1Q13395 1621 aaKnown RBP27.84■■■□□ 2.05
CENPU-206ENST00000514781 SUPT5HO00267 1087 aaKnown RBP27.83■■■□□ 2.05
CENPU-206ENST00000514781 POLA1P09884 1462 aaPredicted RBP27.82■■■□□ 2.04
CENPU-206ENST00000514781 AQRO60306 1485 aaKnown RBP eCLIP27.76■■■□□ 2.041e-7■■■■■ 30.3
CENPU-206ENST00000514781 RAD54L2Q9Y4B4 1467 aa27.76■■■□□ 2.03
CENPU-206ENST00000514781 CHD1O14646 1710 aa27.71■■■□□ 2.03
CENPU-206ENST00000514781 CUX1P39880 1505 aa27.71■■■□□ 2.03
CENPU-206ENST00000514781 FGD5Q6ZNL6 1462 aa27.7■■■□□ 2.02
CENPU-206ENST00000514781 SOGA1O94964 1423 aa27.66■■■□□ 2.02
CENPU-206ENST00000514781 RIMBP3CA6NJZ7 1639 aa27.64■■■□□ 2.02
CENPU-206ENST00000514781 RIMBP3BA6NNM3 1639 aa27.64■■■□□ 2.02
CENPU-206ENST00000514781 RIMBP3Q9UFD9 1639 aa27.64■■■□□ 2.02
CENPU-206ENST00000514781 TDRD9Q8NDG6 1382 aaKnown RBP27.61■■■□□ 2.01
CENPU-206ENST00000514781 FBLN2P98095 1184 aa27.56■■■□□ 2
CENPU-206ENST00000514781 ARHGEF11O15085 1522 aa27.54■■■□□ 2
CENPU-206ENST00000514781 WDR97A6NE52 1622 aa27.52■■■□□ 2
CENPU-206ENST00000514781 SNAPC4Q5SXM2 1469 aa27.52■■■□□ 2
CENPU-206ENST00000514781 PBRM1Q86U86 1689 aa27.43■■□□□ 1.98
CENPU-206ENST00000514781 GRIN2BQ13224 1484 aa27.39■■□□□ 1.98
CENPU-206ENST00000514781 MAGI1Q96QZ7 1491 aaPredicted RBP27.37■■□□□ 1.97
CENPU-206ENST00000514781 GAPVD1Q14C86 1478 aa27.34■■□□□ 1.97
CENPU-206ENST00000514781 ABCA5Q8WWZ7 1642 aa27.34■■□□□ 1.97
CENPU-206ENST00000514781 ABCA10Q8WWZ4 1543 aa27.32■■□□□ 1.96
CENPU-206ENST00000514781 CHMP7Q8WUX9 453 aaPredicted RBP27.32■■□□□ 1.96
CENPU-206ENST00000514781 SYNJ1O43426 1573 aa27.31■■□□□ 1.96
CENPU-206ENST00000514781 BIVM-ERCC5R4GMW8 1640 aa27.3■■□□□ 1.96
CENPU-206ENST00000514781 CYB5RLQ6IPT4 315 aa27.3■■□□□ 1.96
CENPU-206ENST00000514781 ARAP1Q96P48 1450 aa27.3■■□□□ 1.96
CENPU-206ENST00000514781 CLASP1Q7Z460 1538 aa27.3■■□□□ 1.96
CENPU-206ENST00000514781 SYNJ2O15056 1496 aa27.29■■□□□ 1.96
CENPU-206ENST00000514781 TOP2BQ02880 1626 aa27.27■■□□□ 1.96
CENPU-206ENST00000514781 WRNQ14191 1432 aaPredicted RBP eCLIP27.26■■□□□ 1.95
CENPU-206ENST00000514781 ADAMTS12P58397 1594 aa27.14■■□□□ 1.94
CENPU-206ENST00000514781 GRIN2AQ12879 1464 aa27.07■■□□□ 1.92
CENPU-206ENST00000514781 CEP170Q5SW79 1584 aa27.02■■□□□ 1.92
CENPU-206ENST00000514781 ERICH3Q5RHP9 1530 aa26.98■■□□□ 1.91
CENPU-206ENST00000514781 FHAD1B1AJZ9 1412 aa26.97■■□□□ 1.91
CENPU-206ENST00000514781 ERCC6L2Q5T890 1561 aa26.97■■□□□ 1.91
CENPU-206ENST00000514781 TRHP20396 242 aaPredicted RBP26.96■■□□□ 1.91
CENPU-206ENST00000514781 NUP160Q12769 1436 aa26.94■■□□□ 1.9
CENPU-206ENST00000514781 SHROOM2Q13796 1616 aa26.84■■□□□ 1.89
CENPU-206ENST00000514781 RUSC2Q8N2Y8 1516 aa26.75■■□□□ 1.87
CENPU-206ENST00000514781 KIF27Q86VH2 1401 aa26.71■■□□□ 1.87
CENPU-206ENST00000514781 PRG4Q92954 1404 aaPredicted RBP26.7■■□□□ 1.86
CENPU-206ENST00000514781 CUL7Q14999 1698 aa26.67■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms