RNA–Protein interactions for RNA: ENST00000514339.1

AC073848.1-201, humanhuman

TSL 3 BASIC

Gene AC073848.1, Length 457 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC073848.1-201ENST00000514339 AEBP2Q6ZN18 517 aaPredicted RBP24.38■■□□□ 1.49
AC073848.1-201ENST00000514339 CHIC1Q5VXU3 224 aa23.48■■□□□ 1.35
AC073848.1-201ENST00000514339 NISCHQ9Y2I1 1504 aa21.59■■□□□ 1.05
AC073848.1-201ENST00000514339 SENP3Q9H4L4 574 aaPredicted RBP20.69■□□□□ 0.9
AC073848.1-201ENST00000514339 PHF23Q9BUL5 403 aaPredicted RBP20.64■□□□□ 0.89
AC073848.1-201ENST00000514339 FOXD1Q16676 465 aa19.28■□□□□ 0.68
AC073848.1-201ENST00000514339 CCDC180Q9P1Z9 1646 aa19.19■□□□□ 0.66
AC073848.1-201ENST00000514339 PLPPR3Q6T4P5 718 aa18.91■□□□□ 0.62
AC073848.1-201ENST00000514339 ABCC9O60706 1549 aa18.77■□□□□ 0.6
AC073848.1-201ENST00000514339 PPP6R1Q9UPN7 881 aa18.33■□□□□ 0.52
AC073848.1-201ENST00000514339 ADRA2BP18089 450 aa18.3■□□□□ 0.52
AC073848.1-201ENST00000514339 NACADO15069 1562 aa18.11■□□□□ 0.49
AC073848.1-201ENST00000514339 PIAS4Q8N2W9 510 aaPredicted RBP18.1■□□□□ 0.49
AC073848.1-201ENST00000514339 RB1CC1Q8TDY2 1594 aa18.09■□□□□ 0.49
AC073848.1-201ENST00000514339 MYO15BQ96JP2 1530 aa18.08■□□□□ 0.48
AC073848.1-201ENST00000514339 ZCCHC6Q5VYS8 1495 aaKnown RBP17.98■□□□□ 0.47
AC073848.1-201ENST00000514339 DCAF1Q9Y4B6 1507 aa17.94■□□□□ 0.46
AC073848.1-201ENST00000514339 DCAF8L2P0C7V8 631 aa17.94■□□□□ 0.46
AC073848.1-201ENST00000514339 MSH5O43196 834 aa17.85■□□□□ 0.45
AC073848.1-201ENST00000514339 UNC13AQ9UPW8 1703 aa17.55■□□□□ 0.4
AC073848.1-201ENST00000514339 BICRAQ9NZM4 1560 aa17.53■□□□□ 0.4
AC073848.1-201ENST00000514339 PABPN1Q86U42 306 aaKnown RBP eCLIP17.53■□□□□ 0.4
AC073848.1-201ENST00000514339 SHROOM4Q9ULL8 1493 aa17.49■□□□□ 0.39
AC073848.1-201ENST00000514339 SCRIBQ14160 1630 aa17.41■□□□□ 0.38
AC073848.1-201ENST00000514339 DNAJC5BQ9UF47 199 aa17.31■□□□□ 0.36
AC073848.1-201ENST00000514339 EIF4G1Q04637 1599 aaKnown RBP17.08■□□□□ 0.32
AC073848.1-201ENST00000514339 CC2D2AQ9P2K1 1620 aa16.99■□□□□ 0.31
AC073848.1-201ENST00000514339 CECR2Q9BXF3 1484 aa16.93■□□□□ 0.3
AC073848.1-201ENST00000514339 POTEDQ86YR6 584 aa16.84■□□□□ 0.29
AC073848.1-201ENST00000514339 NCAPD3P42695 1498 aa16.74■□□□□ 0.27
AC073848.1-201ENST00000514339 BAZ1AQ9NRL2 1556 aaPredicted RBP16.74■□□□□ 0.27
AC073848.1-201ENST00000514339 SMARCA4P51532 1647 aa16.72■□□□□ 0.27
AC073848.1-201ENST00000514339 ATAD2BQ9ULI0 1458 aa16.7■□□□□ 0.26
AC073848.1-201ENST00000514339 MAPK8IP2Q13387 824 aaPredicted RBP16.7■□□□□ 0.26
AC073848.1-201ENST00000514339 SMARCA2P51531 1590 aa16.68■□□□□ 0.26
AC073848.1-201ENST00000514339 SCAF1Q9H7N4 1312 aaKnown RBP16.68■□□□□ 0.26
AC073848.1-201ENST00000514339 PPP4R3CPQ6ZMV5 832 aa16.65■□□□□ 0.26
AC073848.1-201ENST00000514339 PEG3Q9GZU2 1588 aa16.64■□□□□ 0.25
AC073848.1-201ENST00000514339 HMGXB3Q12766 1538 aa16.62■□□□□ 0.25
AC073848.1-201ENST00000514339 MROH2BQ7Z745 1585 aa16.59■□□□□ 0.25
AC073848.1-201ENST00000514339 BAZ1BQ9UIG0 1483 aaKnown RBP16.52■□□□□ 0.23
AC073848.1-201ENST00000514339 DMRT2Q9Y5R5 561 aa16.48■□□□□ 0.23
AC073848.1-201ENST00000514339 RSF1Q96T23 1441 aaPredicted RBP16.44■□□□□ 0.22
AC073848.1-201ENST00000514339 WIZO95785 1651 aa16.35■□□□□ 0.21
AC073848.1-201ENST00000514339 LAMC3Q9Y6N6 1575 aa16.26■□□□□ 0.19
AC073848.1-201ENST00000514339 TOP2AP11388 1531 aaKnown RBP16.25■□□□□ 0.19
AC073848.1-201ENST00000514339 CADPSQ9ULU8 1353 aa16.24■□□□□ 0.19
AC073848.1-201ENST00000514339 CNKSR2Q8WXI2 1034 aa16.23■□□□□ 0.19
AC073848.1-201ENST00000514339 NESP48681 1621 aa16.22■□□□□ 0.19
AC073848.1-201ENST00000514339 ERCC6Q03468 1493 aa16.2■□□□□ 0.18
AC073848.1-201ENST00000514339 PDS5BQ9NTI5 1447 aa16.19■□□□□ 0.18
AC073848.1-201ENST00000514339 CUX2O14529 1486 aa16.14■□□□□ 0.17
AC073848.1-201ENST00000514339 CFTRP13569 1480 aa16.13■□□□□ 0.17
AC073848.1-201ENST00000514339 NCBP3Q53F19 620 aaKnown RBP16.09■□□□□ 0.17
AC073848.1-201ENST00000514339 CCDC88BA6NC98 1476 aa16.06■□□□□ 0.16
AC073848.1-201ENST00000514339 THOC2Q8NI27 1593 aaKnown RBP16.01■□□□□ 0.15
AC073848.1-201ENST00000514339 HOXD11P31277 338 aaPredicted RBP16.01■□□□□ 0.15
AC073848.1-201ENST00000514339 FANCD2Q9BXW9 1451 aa15.99■□□□□ 0.15
AC073848.1-201ENST00000514339 RNF216Q9NWF9 866 aaPredicted RBP15.99■□□□□ 0.15
AC073848.1-201ENST00000514339 MRC2Q9UBG0 1479 aa15.97■□□□□ 0.15
AC073848.1-201ENST00000514339 CEP164Q9UPV0 1460 aa15.97■□□□□ 0.15
AC073848.1-201ENST00000514339 KIF21AQ7Z4S6 1674 aa15.97■□□□□ 0.15
AC073848.1-201ENST00000514339 KCNA4P22459 653 aa15.95■□□□□ 0.14
AC073848.1-201ENST00000514339 WDR62O43379 1518 aa15.94■□□□□ 0.14
AC073848.1-201ENST00000514339 NPM3O75607 178 aaKnown RBP15.9■□□□□ 0.14
AC073848.1-201ENST00000514339 SUPT5HO00267 1087 aaKnown RBP15.87■□□□□ 0.13
AC073848.1-201ENST00000514339 PRDM2Q13029 1718 aa15.85■□□□□ 0.13
AC073848.1-201ENST00000514339 URB2Q14146 1524 aaKnown RBP15.82■□□□□ 0.12
AC073848.1-201ENST00000514339 DCAF8L1A6NGE4 600 aa15.81■□□□□ 0.12
AC073848.1-201ENST00000514339 ABCC8Q09428 1581 aa15.8■□□□□ 0.12
AC073848.1-201ENST00000514339 TOPBP1Q92547 1522 aa15.73■□□□□ 0.11
AC073848.1-201ENST00000514339 DNMBPQ6XZF7 1577 aa15.7■□□□□ 0.1
AC073848.1-201ENST00000514339 DNAJC5Q9H3Z4 198 aa15.7■□□□□ 0.1
AC073848.1-201ENST00000514339 IFT140Q96RY7 1462 aa15.68■□□□□ 0.1
AC073848.1-201ENST00000514339 POLA1P09884 1462 aaPredicted RBP15.59■□□□□ 0.09
AC073848.1-201ENST00000514339 CUX1P39880 1505 aa15.58■□□□□ 0.08
AC073848.1-201ENST00000514339 TARBP1Q13395 1621 aaKnown RBP15.54■□□□□ 0.08
AC073848.1-201ENST00000514339 ZNF608Q9ULD9 1512 aaPredicted RBP15.54■□□□□ 0.08
AC073848.1-201ENST00000514339 SOGA1O94964 1423 aa15.54■□□□□ 0.08
AC073848.1-201ENST00000514339 FGD5Q6ZNL6 1462 aa15.53■□□□□ 0.08
AC073848.1-201ENST00000514339 WDR97A6NE52 1622 aa15.5■□□□□ 0.07
AC073848.1-201ENST00000514339 RAD54L2Q9Y4B4 1467 aa15.49■□□□□ 0.07
AC073848.1-201ENST00000514339 WRNQ14191 1432 aaPredicted RBP eCLIP15.49■□□□□ 0.07
AC073848.1-201ENST00000514339 EIF4G3O43432 1585 aaKnown RBP15.46■□□□□ 0.07
AC073848.1-201ENST00000514339 AQRO60306 1485 aaKnown RBP eCLIP15.46■□□□□ 0.06
AC073848.1-201ENST00000514339 OSCARQ8IYS5 282 aa15.45■□□□□ 0.06
AC073848.1-201ENST00000514339 ABCA10Q8WWZ4 1543 aa15.43■□□□□ 0.06
AC073848.1-201ENST00000514339 TOP2BQ02880 1626 aa15.43■□□□□ 0.06
AC073848.1-201ENST00000514339 TDRD9Q8NDG6 1382 aaKnown RBP15.43■□□□□ 0.06
AC073848.1-201ENST00000514339 BIVM-ERCC5R4GMW8 1640 aa15.42■□□□□ 0.06
AC073848.1-201ENST00000514339 SYNJ1O43426 1573 aa15.38■□□□□ 0.05
AC073848.1-201ENST00000514339 GRIN2BQ13224 1484 aa15.38■□□□□ 0.05
AC073848.1-201ENST00000514339 GAPVD1Q14C86 1478 aa15.36■□□□□ 0.05
AC073848.1-201ENST00000514339 MAGI1Q96QZ7 1491 aaPredicted RBP15.36■□□□□ 0.05
AC073848.1-201ENST00000514339 SNAPC4Q5SXM2 1469 aa15.32■□□□□ 0.04
AC073848.1-201ENST00000514339 ABCA5Q8WWZ7 1642 aa15.32■□□□□ 0.04
AC073848.1-201ENST00000514339 RNF39Q9H2S5 420 aa15.29■□□□□ 0.04
AC073848.1-201ENST00000514339 SYNJ2O15056 1496 aa15.28■□□□□ 0.04
AC073848.1-201ENST00000514339 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.27■□□□□ 0.04
AC073848.1-201ENST00000514339 CHMP7Q8WUX9 453 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms