RNA–Protein interactions for RNA: ENST00000514175.1

ACTN4P1-201, Transcript of actinin alpha 4 pseudogene 1, humanhuman

BASIC

Gene ACTN4P1, Length 1,451 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4P1-201ENST00000514175 NISCHQ9Y2I1 1504 aa27.07■■□□□ 1.92
ACTN4P1-201ENST00000514175 CCDC180Q9P1Z9 1646 aa24.06■■□□□ 1.44
ACTN4P1-201ENST00000514175 ABCC9O60706 1549 aa23.47■■□□□ 1.35
ACTN4P1-201ENST00000514175 DCAF8L2P0C7V8 631 aa22.63■■□□□ 1.21
ACTN4P1-201ENST00000514175 RB1CC1Q8TDY2 1594 aa22.6■■□□□ 1.21
ACTN4P1-201ENST00000514175 ZCCHC6Q5VYS8 1495 aaKnown RBP22.58■■□□□ 1.21
ACTN4P1-201ENST00000514175 NACADO15069 1562 aa22.56■■□□□ 1.2
ACTN4P1-201ENST00000514175 MYO15BQ96JP2 1530 aa22.41■■□□□ 1.18
ACTN4P1-201ENST00000514175 DCAF1Q9Y4B6 1507 aa22.36■■□□□ 1.17
ACTN4P1-201ENST00000514175 UNC13AQ9UPW8 1703 aa22.13■■□□□ 1.13
ACTN4P1-201ENST00000514175 SCRIBQ14160 1630 aa22.02■■□□□ 1.11
ACTN4P1-201ENST00000514175 PABPN1Q86U42 306 aaKnown RBP eCLIP21.93■■□□□ 1.1
ACTN4P1-201ENST00000514175 BICRAQ9NZM4 1560 aa21.89■■□□□ 1.09
ACTN4P1-201ENST00000514175 SHROOM4Q9ULL8 1493 aa21.64■■□□□ 1.05
ACTN4P1-201ENST00000514175 DNAJC5BQ9UF47 199 aa21.39■■□□□ 1.01
ACTN4P1-201ENST00000514175 EIF4G1Q04637 1599 aaKnown RBP21.33■■□□□ 1
ACTN4P1-201ENST00000514175 CC2D2AQ9P2K1 1620 aa21.23■□□□□ 0.99
ACTN4P1-201ENST00000514175 CECR2Q9BXF3 1484 aa21.09■□□□□ 0.97
ACTN4P1-201ENST00000514175 SMARCA4P51532 1647 aa21.03■□□□□ 0.96
ACTN4P1-201ENST00000514175 BAZ1AQ9NRL2 1556 aaPredicted RBP20.99■□□□□ 0.95
ACTN4P1-201ENST00000514175 MROH2BQ7Z745 1585 aa20.88■□□□□ 0.93
ACTN4P1-201ENST00000514175 ATAD2BQ9ULI0 1458 aa20.84■□□□□ 0.93
ACTN4P1-201ENST00000514175 SMARCA2P51531 1590 aa20.84■□□□□ 0.93
ACTN4P1-201ENST00000514175 NCAPD3P42695 1498 aa20.78■□□□□ 0.92
ACTN4P1-201ENST00000514175 PEG3Q9GZU2 1588 aa20.77■□□□□ 0.92
ACTN4P1-201ENST00000514175 HMGXB3Q12766 1538 aa20.74■□□□□ 0.91
ACTN4P1-201ENST00000514175 BAZ1BQ9UIG0 1483 aaKnown RBP20.72■□□□□ 0.91
ACTN4P1-201ENST00000514175 WIZO95785 1651 aa20.69■□□□□ 0.9
ACTN4P1-201ENST00000514175 RSF1Q96T23 1441 aaPredicted RBP20.64■□□□□ 0.9
ACTN4P1-201ENST00000514175 SUPT5HO00267 1087 aaKnown RBP20.56■□□□□ 0.88
ACTN4P1-201ENST00000514175 TOP2AP11388 1531 aaKnown RBP20.46■□□□□ 0.87
ACTN4P1-201ENST00000514175 NESP48681 1621 aa20.33■□□□□ 0.85
ACTN4P1-201ENST00000514175 LAMC3Q9Y6N6 1575 aa20.28■□□□□ 0.84
ACTN4P1-201ENST00000514175 ERCC6Q03468 1493 aa20.25■□□□□ 0.83
ACTN4P1-201ENST00000514175 CADPSQ9ULU8 1353 aa20.2■□□□□ 0.82
ACTN4P1-201ENST00000514175 CCDC88BA6NC98 1476 aa20.2■□□□□ 0.82
ACTN4P1-201ENST00000514175 KIF21AQ7Z4S6 1674 aa20.13■□□□□ 0.81
ACTN4P1-201ENST00000514175 PDS5BQ9NTI5 1447 aa20.12■□□□□ 0.81
ACTN4P1-201ENST00000514175 CFTRP13569 1480 aa20.1■□□□□ 0.81
ACTN4P1-201ENST00000514175 PRDM2Q13029 1718 aa20.04■□□□□ 0.8
ACTN4P1-201ENST00000514175 THOC2Q8NI27 1593 aaKnown RBP20.01■□□□□ 0.79
ACTN4P1-201ENST00000514175 FANCD2Q9BXW9 1451 aa20.01■□□□□ 0.79
ACTN4P1-201ENST00000514175 CEP164Q9UPV0 1460 aa19.99■□□□□ 0.79
ACTN4P1-201ENST00000514175 CUX2O14529 1486 aa19.94■□□□□ 0.78
ACTN4P1-201ENST00000514175 MRC2Q9UBG0 1479 aa19.93■□□□□ 0.78
ACTN4P1-201ENST00000514175 WDR62O43379 1518 aa19.86■□□□□ 0.77
ACTN4P1-201ENST00000514175 URB2Q14146 1524 aaKnown RBP19.8■□□□□ 0.76
ACTN4P1-201ENST00000514175 CHIC1Q5VXU3 224 aa19.71■□□□□ 0.75
ACTN4P1-201ENST00000514175 TOPBP1Q92547 1522 aa19.69■□□□□ 0.74
ACTN4P1-201ENST00000514175 DNMBPQ6XZF7 1577 aa19.69■□□□□ 0.74
ACTN4P1-201ENST00000514175 ABCC8Q09428 1581 aa19.66■□□□□ 0.74
ACTN4P1-201ENST00000514175 CUX1P39880 1505 aa19.59■□□□□ 0.73
ACTN4P1-201ENST00000514175 POLA1P09884 1462 aaPredicted RBP19.54■□□□□ 0.72
ACTN4P1-201ENST00000514175 IFT140Q96RY7 1462 aa19.54■□□□□ 0.72
ACTN4P1-201ENST00000514175 FGD5Q6ZNL6 1462 aa19.52■□□□□ 0.72
ACTN4P1-201ENST00000514175 WRNQ14191 1432 aaPredicted RBP eCLIP19.49■□□□□ 0.71
ACTN4P1-201ENST00000514175 SYNJ1O43426 1573 aa19.47■□□□□ 0.71
ACTN4P1-201ENST00000514175 TARBP1Q13395 1621 aaKnown RBP19.47■□□□□ 0.71
ACTN4P1-201ENST00000514175 RAD54L2Q9Y4B4 1467 aa19.46■□□□□ 0.71
ACTN4P1-201ENST00000514175 ZNF608Q9ULD9 1512 aaPredicted RBP19.46■□□□□ 0.71
ACTN4P1-201ENST00000514175 TOP2BQ02880 1626 aa19.45■□□□□ 0.7
ACTN4P1-201ENST00000514175 BIVM-ERCC5R4GMW8 1640 aa19.45■□□□□ 0.7
ACTN4P1-201ENST00000514175 SOGA1O94964 1423 aa19.44■□□□□ 0.7
ACTN4P1-201ENST00000514175 EIF4G3O43432 1585 aaKnown RBP19.44■□□□□ 0.7
ACTN4P1-201ENST00000514175 TRIM41Q8WV44 630 aa19.41■□□□□ 0.7
ACTN4P1-201ENST00000514175 WDR97A6NE52 1622 aa19.37■□□□□ 0.69
ACTN4P1-201ENST00000514175 AQRO60306 1485 aaKnown RBP eCLIP19.36■□□□□ 0.69
ACTN4P1-201ENST00000514175 TDRD9Q8NDG6 1382 aaKnown RBP19.33■□□□□ 0.69
ACTN4P1-201ENST00000514175 ABCA10Q8WWZ4 1543 aa19.3■□□□□ 0.68
ACTN4P1-201ENST00000514175 ABCA5Q8WWZ7 1642 aa19.25■□□□□ 0.67
ACTN4P1-201ENST00000514175 PBRM1Q86U86 1689 aa19.25■□□□□ 0.67
ACTN4P1-201ENST00000514175 GAPVD1Q14C86 1478 aa19.23■□□□□ 0.67
ACTN4P1-201ENST00000514175 GRIN2BQ13224 1484 aa19.21■□□□□ 0.67
ACTN4P1-201ENST00000514175 SNAPC4Q5SXM2 1469 aa19.21■□□□□ 0.67
ACTN4P1-201ENST00000514175 CHD1O14646 1710 aa19.18■□□□□ 0.66
ACTN4P1-201ENST00000514175 DNAJC5Q9H3Z4 198 aa19.17■□□□□ 0.66
ACTN4P1-201ENST00000514175 MAGI1Q96QZ7 1491 aaPredicted RBP19.16■□□□□ 0.66
ACTN4P1-201ENST00000514175 FBLN2P98095 1184 aa19.15■□□□□ 0.66
ACTN4P1-201ENST00000514175 OSCARQ8IYS5 282 aa19.1■□□□□ 0.65
ACTN4P1-201ENST00000514175 SYNJ2O15056 1496 aa19.08■□□□□ 0.65
ACTN4P1-201ENST00000514175 ERICH3Q5RHP9 1530 aa19.08■□□□□ 0.64
ACTN4P1-201ENST00000514175 ADAMTS12P58397 1594 aa19.08■□□□□ 0.64
ACTN4P1-201ENST00000514175 KIF27Q86VH2 1401 aa19.07■□□□□ 0.64
ACTN4P1-201ENST00000514175 CHMP7Q8WUX9 453 aaPredicted RBP19.07■□□□□ 0.64
ACTN4P1-201ENST00000514175 EEA1Q15075 1411 aa19.03■□□□□ 0.64
ACTN4P1-201ENST00000514175 FHAD1B1AJZ9 1412 aa19■□□□□ 0.63
ACTN4P1-201ENST00000514175 GRIN2AQ12879 1464 aa18.99■□□□□ 0.63
ACTN4P1-201ENST00000514175 CUL7Q14999 1698 aa18.97■□□□□ 0.63
ACTN4P1-201ENST00000514175 FAM9AQ8IZU1 332 aaPredicted RBP18.94■□□□□ 0.62
ACTN4P1-201ENST00000514175 RUSC2Q8N2Y8 1516 aa18.93■□□□□ 0.62
ACTN4P1-201ENST00000514175 IGF1RP08069 1367 aa18.93■□□□□ 0.62
ACTN4P1-201ENST00000514175 CLASP1Q7Z460 1538 aa18.92■□□□□ 0.62
ACTN4P1-201ENST00000514175 CEP170Q5SW79 1584 aa18.9■□□□□ 0.62
ACTN4P1-201ENST00000514175 LOC105371045A0A1W2PR82 267 aa18.89■□□□□ 0.61
ACTN4P1-201ENST00000514175 RIMBP3CA6NJZ7 1639 aa18.86■□□□□ 0.61
ACTN4P1-201ENST00000514175 RIMBP3BA6NNM3 1639 aa18.86■□□□□ 0.61
ACTN4P1-201ENST00000514175 RIMBP3Q9UFD9 1639 aa18.86■□□□□ 0.61
ACTN4P1-201ENST00000514175 NUP160Q12769 1436 aa18.86■□□□□ 0.61
ACTN4P1-201ENST00000514175 CARMIL1Q5VZK9 1371 aa18.85■□□□□ 0.61
ACTN4P1-201ENST00000514175 ARHGEF11O15085 1522 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms