RNA–Protein interactions for RNA: ENST00000513832.5

LEMD2-212, Transcript of LEM domain containing 2, humanhuman

TSL 4

Gene LEMD2, Length 821 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD2-212ENST00000513832 NISCHQ9Y2I1 1504 aa23.88■■□□□ 1.41
LEMD2-212ENST00000513832 ABCC9O60706 1549 aa22.43■■□□□ 1.18
LEMD2-212ENST00000513832 DNAJC5BQ9UF47 199 aa21.68■■□□□ 1.06
LEMD2-212ENST00000513832 CCDC180Q9P1Z9 1646 aa21.52■■□□□ 1.04
LEMD2-212ENST00000513832 RB1CC1Q8TDY2 1594 aa20.92■□□□□ 0.94
LEMD2-212ENST00000513832 PABPN1Q86U42 306 aaKnown RBP eCLIP20.88■□□□□ 0.93
LEMD2-212ENST00000513832 DCAF8L2P0C7V8 631 aa20.67■□□□□ 0.9
LEMD2-212ENST00000513832 NACADO15069 1562 aa20.61■□□□□ 0.89
LEMD2-212ENST00000513832 BICRAQ9NZM4 1560 aa20.34■□□□□ 0.85
LEMD2-212ENST00000513832 DNAJC5Q9H3Z4 198 aa20.33■□□□□ 0.85
LEMD2-212ENST00000513832 CECR2Q9BXF3 1484 aa20.25■□□□□ 0.83
LEMD2-212ENST00000513832 UNC13AQ9UPW8 1703 aa20.21■□□□□ 0.83
LEMD2-212ENST00000513832 CC2D2AQ9P2K1 1620 aa20.1■□□□□ 0.81
LEMD2-212ENST00000513832 MYO15BQ96JP2 1530 aa20.1■□□□□ 0.81
LEMD2-212ENST00000513832 SHROOM4Q9ULL8 1493 aa19.97■□□□□ 0.79
LEMD2-212ENST00000513832 EIF4G1Q04637 1599 aaKnown RBP19.91■□□□□ 0.78
LEMD2-212ENST00000513832 SCRIBQ14160 1630 aa19.74■□□□□ 0.75
LEMD2-212ENST00000513832 ZCCHC6Q5VYS8 1495 aaKnown RBP19.65■□□□□ 0.74
LEMD2-212ENST00000513832 DCAF1Q9Y4B6 1507 aa19.61■□□□□ 0.73
LEMD2-212ENST00000513832 CUX2O14529 1486 aa19.51■□□□□ 0.71
LEMD2-212ENST00000513832 ERCC6Q03468 1493 aa19.41■□□□□ 0.7
LEMD2-212ENST00000513832 TRIM41Q8WV44 630 aa19.27■□□□□ 0.68
LEMD2-212ENST00000513832 NCAPD3P42695 1498 aa19.12■□□□□ 0.65
LEMD2-212ENST00000513832 NESP48681 1621 aa19.07■□□□□ 0.64
LEMD2-212ENST00000513832 ATAD2BQ9ULI0 1458 aa18.98■□□□□ 0.63
LEMD2-212ENST00000513832 THOC2Q8NI27 1593 aaKnown RBP18.86■□□□□ 0.61
LEMD2-212ENST00000513832 HMGXB3Q12766 1538 aa18.84■□□□□ 0.61
LEMD2-212ENST00000513832 SMARCA2P51531 1590 aa18.82■□□□□ 0.6
LEMD2-212ENST00000513832 BAZ1BQ9UIG0 1483 aaKnown RBP18.77■□□□□ 0.59
LEMD2-212ENST00000513832 PDS5BQ9NTI5 1447 aa18.73■□□□□ 0.59
LEMD2-212ENST00000513832 SMARCA4P51532 1647 aa18.71■□□□□ 0.58
LEMD2-212ENST00000513832 LAMC3Q9Y6N6 1575 aa18.69■□□□□ 0.58
LEMD2-212ENST00000513832 OSCARQ8IYS5 282 aa18.62■□□□□ 0.57
LEMD2-212ENST00000513832 MRC2Q9UBG0 1479 aa18.59■□□□□ 0.57
LEMD2-212ENST00000513832 KIF21AQ7Z4S6 1674 aa18.59■□□□□ 0.57
LEMD2-212ENST00000513832 CADPSQ9ULU8 1353 aa18.55■□□□□ 0.56
LEMD2-212ENST00000513832 BAZ1AQ9NRL2 1556 aaPredicted RBP18.55■□□□□ 0.56
LEMD2-212ENST00000513832 WDR62O43379 1518 aa18.5■□□□□ 0.55
LEMD2-212ENST00000513832 PEG3Q9GZU2 1588 aa18.49■□□□□ 0.55
LEMD2-212ENST00000513832 MROH2BQ7Z745 1585 aa18.42■□□□□ 0.54
LEMD2-212ENST00000513832 CEP164Q9UPV0 1460 aa18.38■□□□□ 0.53
LEMD2-212ENST00000513832 FANCD2Q9BXW9 1451 aa18.33■□□□□ 0.52
LEMD2-212ENST00000513832 TRHP20396 242 aaPredicted RBP18.31■□□□□ 0.52
LEMD2-212ENST00000513832 RIMBP3CA6NJZ7 1639 aa18.29■□□□□ 0.52
LEMD2-212ENST00000513832 RIMBP3BA6NNM3 1639 aa18.29■□□□□ 0.52
LEMD2-212ENST00000513832 RIMBP3Q9UFD9 1639 aa18.29■□□□□ 0.52
LEMD2-212ENST00000513832 CYB5RLQ6IPT4 315 aa18.27■□□□□ 0.52
LEMD2-212ENST00000513832 ARHGEF11O15085 1522 aa18.23■□□□□ 0.51
LEMD2-212ENST00000513832 AEBP2Q6ZN18 517 aaPredicted RBP18.23■□□□□ 0.51
LEMD2-212ENST00000513832 URB2Q14146 1524 aaKnown RBP18.2■□□□□ 0.5
LEMD2-212ENST00000513832 CFTRP13569 1480 aa18.16■□□□□ 0.5
LEMD2-212ENST00000513832 ZNF608Q9ULD9 1512 aaPredicted RBP18.12■□□□□ 0.49
LEMD2-212ENST00000513832 WIZO95785 1651 aa18.09■□□□□ 0.49
LEMD2-212ENST00000513832 IFT140Q96RY7 1462 aa18.05■□□□□ 0.48
LEMD2-212ENST00000513832 ARAP1Q96P48 1450 aa18.04■□□□□ 0.48
LEMD2-212ENST00000513832 FBLN2P98095 1184 aa18■□□□□ 0.47
LEMD2-212ENST00000513832 RSF1Q96T23 1441 aaPredicted RBP17.91■□□□□ 0.46
LEMD2-212ENST00000513832 AQRO60306 1485 aaKnown RBP eCLIP17.89■□□□□ 0.453e-7■■■■■ 30.5
LEMD2-212ENST00000513832 TOPBP1Q92547 1522 aa17.88■□□□□ 0.45
LEMD2-212ENST00000513832 EIF4G3O43432 1585 aaKnown RBP17.87■□□□□ 0.45
LEMD2-212ENST00000513832 TOP2AP11388 1531 aaKnown RBP17.85■□□□□ 0.45
LEMD2-212ENST00000513832 CHD1O14646 1710 aa17.75■□□□□ 0.43
LEMD2-212ENST00000513832 ABCC8Q09428 1581 aa17.74■□□□□ 0.43
LEMD2-212ENST00000513832 CCDC88BA6NC98 1476 aa17.72■□□□□ 0.43
LEMD2-212ENST00000513832 TDRD9Q8NDG6 1382 aaKnown RBP17.72■□□□□ 0.43
LEMD2-212ENST00000513832 CHMP7Q8WUX9 453 aaPredicted RBP17.72■□□□□ 0.43
LEMD2-212ENST00000513832 DNMBPQ6XZF7 1577 aa17.7■□□□□ 0.42
LEMD2-212ENST00000513832 TARBP1Q13395 1621 aaKnown RBP17.68■□□□□ 0.42
LEMD2-212ENST00000513832 POLA1P09884 1462 aaPredicted RBP17.67■□□□□ 0.42
LEMD2-212ENST00000513832 SNAPC4Q5SXM2 1469 aa17.67■□□□□ 0.42
LEMD2-212ENST00000513832 RAD54L2Q9Y4B4 1467 aa17.67■□□□□ 0.42
LEMD2-212ENST00000513832 CLASP1Q7Z460 1538 aa17.65■□□□□ 0.42
LEMD2-212ENST00000513832 SOGA1O94964 1423 aa17.63■□□□□ 0.41
LEMD2-212ENST00000513832 GAPVD1Q14C86 1478 aa17.6■□□□□ 0.41
LEMD2-212ENST00000513832 PRDM2Q13029 1718 aa17.59■□□□□ 0.41
LEMD2-212ENST00000513832 SYNJ1O43426 1573 aa17.58■□□□□ 0.41
LEMD2-212ENST00000513832 MAGI1Q96QZ7 1491 aaPredicted RBP17.53■□□□□ 0.4
LEMD2-212ENST00000513832 SYNJ2O15056 1496 aa17.51■□□□□ 0.39
LEMD2-212ENST00000513832 ILDR1Q86SU0 546 aaPredicted RBP17.51■□□□□ 0.39
LEMD2-212ENST00000513832 GRIN2BQ13224 1484 aa17.5■□□□□ 0.39
LEMD2-212ENST00000513832 FGD5Q6ZNL6 1462 aa17.48■□□□□ 0.39
LEMD2-212ENST00000513832 WDR97A6NE52 1622 aa17.39■□□□□ 0.38
LEMD2-212ENST00000513832 ERCC6L2Q5T890 1561 aa17.39■□□□□ 0.37
LEMD2-212ENST00000513832 KDM4FA0A1W2PPD8 638 aa17.36■□□□□ 0.37
LEMD2-212ENST00000513832 CUX1P39880 1505 aa17.33■□□□□ 0.37
LEMD2-212ENST00000513832 FAM69CQ0P6D2 419 aa17.32■□□□□ 0.36
LEMD2-212ENST00000513832 CEP170Q5SW79 1584 aa17.27■□□□□ 0.35
LEMD2-212ENST00000513832 GRIN2AQ12879 1464 aa17.26■□□□□ 0.35
LEMD2-212ENST00000513832 NUP160Q12769 1436 aa17.24■□□□□ 0.35
LEMD2-212ENST00000513832 ABCA10Q8WWZ4 1543 aa17.21■□□□□ 0.34
LEMD2-212ENST00000513832 NPM1P06748 294 aaKnown RBP eCLIP17.2■□□□□ 0.34
LEMD2-212ENST00000513832 ABCC10Q5T3U5 1492 aa17.19■□□□□ 0.34
LEMD2-212ENST00000513832 PBRM1Q86U86 1689 aa17.19■□□□□ 0.34
LEMD2-212ENST00000513832 PRG4Q92954 1404 aaPredicted RBP17.18■□□□□ 0.34
LEMD2-212ENST00000513832 ABCA5Q8WWZ7 1642 aa17.16■□□□□ 0.34
LEMD2-212ENST00000513832 JPH4Q96JJ6 628 aa17.14■□□□□ 0.33
LEMD2-212ENST00000513832 KIF13AQ9H1H9 1805 aa17.13■□□□□ 0.33
LEMD2-212ENST00000513832 FHAD1B1AJZ9 1412 aa17.13■□□□□ 0.33
LEMD2-212ENST00000513832 ADAMTS12P58397 1594 aa17.11■□□□□ 0.33
LEMD2-212ENST00000513832 SHROOM2Q13796 1616 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms