RNA–Protein interactions for RNA: ENST00000513410.1

COPG1-207, Transcript of coatomer protein complex subunit gamma 1, humanhuman

TSL 2

Gene COPG1, Length 545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPG1-207ENST00000513410 NISCHQ9Y2I1 1504 aa31.16■■■□□ 2.58
COPG1-207ENST00000513410 CCDC180Q9P1Z9 1646 aa27.43■■□□□ 1.98
COPG1-207ENST00000513410 ABCC9O60706 1549 aa26.39■■□□□ 1.81
COPG1-207ENST00000513410 DCAF8L2P0C7V8 631 aa26.05■■□□□ 1.76
COPG1-207ENST00000513410 ZCCHC6Q5VYS8 1495 aaKnown RBP26.04■■□□□ 1.76
COPG1-207ENST00000513410 DCAF1Q9Y4B6 1507 aa25.77■■□□□ 1.72
COPG1-207ENST00000513410 NACADO15069 1562 aa25.69■■□□□ 1.7
COPG1-207ENST00000513410 MYO15BQ96JP2 1530 aa25.67■■□□□ 1.7
COPG1-207ENST00000513410 RB1CC1Q8TDY2 1594 aa25.61■■□□□ 1.69
COPG1-207ENST00000513410 SCRIBQ14160 1630 aa25.14■■□□□ 1.61
COPG1-207ENST00000513410 SHROOM4Q9ULL8 1493 aa25.09■■□□□ 1.61
COPG1-207ENST00000513410 UNC13AQ9UPW8 1703 aa24.95■■□□□ 1.59
COPG1-207ENST00000513410 PABPN1Q86U42 306 aaKnown RBP eCLIP24.8■■□□□ 1.56
COPG1-207ENST00000513410 BICRAQ9NZM4 1560 aa24.71■■□□□ 1.55
COPG1-207ENST00000513410 CECR2Q9BXF3 1484 aa24.21■■□□□ 1.47
COPG1-207ENST00000513410 BAZ1AQ9NRL2 1556 aaPredicted RBP24.13■■□□□ 1.45
COPG1-207ENST00000513410 EIF4G1Q04637 1599 aaKnown RBP24.07■■□□□ 1.44
COPG1-207ENST00000513410 SMARCA4P51532 1647 aa24.06■■□□□ 1.44
COPG1-207ENST00000513410 MROH2BQ7Z745 1585 aa24.03■■□□□ 1.44
COPG1-207ENST00000513410 RSF1Q96T23 1441 aaPredicted RBP23.96■■□□□ 1.43
COPG1-207ENST00000513410 SUPT5HO00267 1087 aaKnown RBP23.96■■□□□ 1.43
COPG1-207ENST00000513410 CC2D2AQ9P2K1 1620 aa23.84■■□□□ 1.41
COPG1-207ENST00000513410 SMARCA2P51531 1590 aa23.82■■□□□ 1.4
COPG1-207ENST00000513410 WIZO95785 1651 aa23.8■■□□□ 1.4
COPG1-207ENST00000513410 ATAD2BQ9ULI0 1458 aa23.79■■□□□ 1.4
COPG1-207ENST00000513410 PEG3Q9GZU2 1588 aa23.75■■□□□ 1.39
COPG1-207ENST00000513410 NCAPD3P42695 1498 aa23.68■■□□□ 1.38
COPG1-207ENST00000513410 BAZ1BQ9UIG0 1483 aaKnown RBP23.68■■□□□ 1.38
COPG1-207ENST00000513410 DNAJC5BQ9UF47 199 aa23.66■■□□□ 1.38
COPG1-207ENST00000513410 HMGXB3Q12766 1538 aa23.6■■□□□ 1.37
COPG1-207ENST00000513410 TOP2AP11388 1531 aaKnown RBP23.58■■□□□ 1.36
COPG1-207ENST00000513410 CCDC88BA6NC98 1476 aa23.32■■□□□ 1.32
COPG1-207ENST00000513410 CADPSQ9ULU8 1353 aa23.07■■□□□ 1.28
COPG1-207ENST00000513410 CFTRP13569 1480 aa23.01■■□□□ 1.27
COPG1-207ENST00000513410 LAMC3Q9Y6N6 1575 aa22.98■■□□□ 1.27
COPG1-207ENST00000513410 NESP48681 1621 aa22.96■■□□□ 1.27
COPG1-207ENST00000513410 PDS5BQ9NTI5 1447 aa22.88■■□□□ 1.25
COPG1-207ENST00000513410 PRDM2Q13029 1718 aa22.87■■□□□ 1.25
COPG1-207ENST00000513410 FANCD2Q9BXW9 1451 aa22.8■■□□□ 1.24
COPG1-207ENST00000513410 ERCC6Q03468 1493 aa22.76■■□□□ 1.23
COPG1-207ENST00000513410 CEP164Q9UPV0 1460 aa22.73■■□□□ 1.23
COPG1-207ENST00000513410 KIF21AQ7Z4S6 1674 aa22.69■■□□□ 1.22
COPG1-207ENST00000513410 ABCC8Q09428 1581 aa22.63■■□□□ 1.21
COPG1-207ENST00000513410 WRNQ14191 1432 aaPredicted RBP eCLIP22.63■■□□□ 1.21
COPG1-207ENST00000513410 CHIC1Q5VXU3 224 aa22.61■■□□□ 1.21
COPG1-207ENST00000513410 TRIM41Q8WV44 630 aa22.6■■□□□ 1.21
COPG1-207ENST00000513410 MRC2Q9UBG0 1479 aa22.57■■□□□ 1.2
COPG1-207ENST00000513410 DNMBPQ6XZF7 1577 aa22.5■■□□□ 1.19
COPG1-207ENST00000513410 CUX1P39880 1505 aa22.5■■□□□ 1.19
COPG1-207ENST00000513410 URB2Q14146 1524 aaKnown RBP22.5■■□□□ 1.19
COPG1-207ENST00000513410 TOPBP1Q92547 1522 aa22.48■■□□□ 1.19
COPG1-207ENST00000513410 SYNJ1O43426 1573 aa22.47■■□□□ 1.19
COPG1-207ENST00000513410 TOP2BQ02880 1626 aa22.46■■□□□ 1.19
COPG1-207ENST00000513410 BIVM-ERCC5R4GMW8 1640 aa22.44■■□□□ 1.18
COPG1-207ENST00000513410 THOC2Q8NI27 1593 aaKnown RBP22.43■■□□□ 1.18
COPG1-207ENST00000513410 WDR62O43379 1518 aa22.41■■□□□ 1.18
COPG1-207ENST00000513410 FGD5Q6ZNL6 1462 aa22.37■■□□□ 1.17
COPG1-207ENST00000513410 POLA1P09884 1462 aaPredicted RBP22.32■■□□□ 1.16
COPG1-207ENST00000513410 SOGA1O94964 1423 aa22.31■■□□□ 1.16
COPG1-207ENST00000513410 RAD54L2Q9Y4B4 1467 aa22.24■■□□□ 1.15
COPG1-207ENST00000513410 CUX2O14529 1486 aa22.23■■□□□ 1.15
COPG1-207ENST00000513410 IFT140Q96RY7 1462 aa22.23■■□□□ 1.15
COPG1-207ENST00000513410 ABCA10Q8WWZ4 1543 aa22.16■■□□□ 1.14
COPG1-207ENST00000513410 TARBP1Q13395 1621 aaKnown RBP22.14■■□□□ 1.14
COPG1-207ENST00000513410 FAM9AQ8IZU1 332 aaPredicted RBP22.14■■□□□ 1.13
COPG1-207ENST00000513410 KIF27Q86VH2 1401 aa22.14■■□□□ 1.13
COPG1-207ENST00000513410 TDRD9Q8NDG6 1382 aaKnown RBP22.12■■□□□ 1.13
COPG1-207ENST00000513410 EEA1Q15075 1411 aa22.09■■□□□ 1.13
COPG1-207ENST00000513410 WDR97A6NE52 1622 aa22.07■■□□□ 1.12
COPG1-207ENST00000513410 GAPVD1Q14C86 1478 aa22.04■■□□□ 1.12
COPG1-207ENST00000513410 RUSC2Q8N2Y8 1516 aa22.04■■□□□ 1.12
COPG1-207ENST00000513410 ZNF608Q9ULD9 1512 aaPredicted RBP22.04■■□□□ 1.12
COPG1-207ENST00000513410 AQRO60306 1485 aaKnown RBP eCLIP22.03■■□□□ 1.125e-8■■■■■ 38.5
COPG1-207ENST00000513410 CSRNP3Q8WYN3 585 aa22.02■■□□□ 1.12
COPG1-207ENST00000513410 ABCA5Q8WWZ7 1642 aa21.98■■□□□ 1.11
COPG1-207ENST00000513410 EIF4G3O43432 1585 aaKnown RBP21.97■■□□□ 1.11
COPG1-207ENST00000513410 GRIN2BQ13224 1484 aa21.96■■□□□ 1.11
COPG1-207ENST00000513410 IGF1RP08069 1367 aa21.94■■□□□ 1.1
COPG1-207ENST00000513410 ERICH3Q5RHP9 1530 aa21.91■■□□□ 1.1
COPG1-207ENST00000513410 PBRM1Q86U86 1689 aa21.91■■□□□ 1.1
COPG1-207ENST00000513410 CARMIL1Q5VZK9 1371 aa21.87■■□□□ 1.09
COPG1-207ENST00000513410 EHMT2Q96KQ7 1210 aa21.84■■□□□ 1.09
COPG1-207ENST00000513410 CUL7Q14999 1698 aa21.84■■□□□ 1.09
COPG1-207ENST00000513410 SNAPC4Q5SXM2 1469 aa21.83■■□□□ 1.09
COPG1-207ENST00000513410 MAGI1Q96QZ7 1491 aaPredicted RBP21.82■■□□□ 1.08
COPG1-207ENST00000513410 FHAD1B1AJZ9 1412 aa21.8■■□□□ 1.08
COPG1-207ENST00000513410 FBLN2P98095 1184 aa21.8■■□□□ 1.08
COPG1-207ENST00000513410 CHMP7Q8WUX9 453 aaPredicted RBP21.8■■□□□ 1.08
COPG1-207ENST00000513410 PRXQ9BXM0 1461 aa21.77■■□□□ 1.08
COPG1-207ENST00000513410 RAPGEF2Q9Y4G8 1499 aa21.77■■□□□ 1.08
COPG1-207ENST00000513410 ADAMTS12P58397 1594 aa21.75■■□□□ 1.07
COPG1-207ENST00000513410 UBTFP17480 764 aaKnown RBP21.75■■□□□ 1.07
COPG1-207ENST00000513410 KIF21BO75037 1637 aa21.75■■□□□ 1.07
COPG1-207ENST00000513410 SYNJ2O15056 1496 aa21.73■■□□□ 1.07
COPG1-207ENST00000513410 GOLGA3Q08378 1498 aa21.73■■□□□ 1.07
COPG1-207ENST00000513410 LOC105371045A0A1W2PR82 267 aa21.72■■□□□ 1.07
COPG1-207ENST00000513410 GRIN2AQ12879 1464 aa21.64■■□□□ 1.06
COPG1-207ENST00000513410 CHD1O14646 1710 aa21.6■■□□□ 1.05
COPG1-207ENST00000513410 TNIKQ9UKE5 1360 aa21.56■■□□□ 1.04
COPG1-207ENST00000513410 RANGAP1P46060 587 aaPredicted RBP21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms