RNA–Protein interactions for RNA: ENST00000513253.1

CHCHD6-206, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 6, humanhuman

TSL 3

Gene CHCHD6, Length 690 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD6-206ENST00000513253 NISCHQ9Y2I1 1504 aa27.67■■■□□ 2.02
CHCHD6-206ENST00000513253 CCDC180Q9P1Z9 1646 aa24.68■■□□□ 1.54
CHCHD6-206ENST00000513253 ABCC9O60706 1549 aa24.66■■□□□ 1.54
CHCHD6-206ENST00000513253 RB1CC1Q8TDY2 1594 aa23.4■■□□□ 1.34
CHCHD6-206ENST00000513253 DCAF8L2P0C7V8 631 aa23.37■■□□□ 1.33
CHCHD6-206ENST00000513253 NACADO15069 1562 aa23.26■■□□□ 1.31
CHCHD6-206ENST00000513253 UNC13AQ9UPW8 1703 aa23.02■■□□□ 1.28
CHCHD6-206ENST00000513253 PABPN1Q86U42 306 aaKnown RBP eCLIP23.01■■□□□ 1.27
CHCHD6-206ENST00000513253 ZCCHC6Q5VYS8 1495 aaKnown RBP22.99■■□□□ 1.27
CHCHD6-206ENST00000513253 DNAJC5BQ9UF47 199 aa22.96■■□□□ 1.27
CHCHD6-206ENST00000513253 MYO15BQ96JP2 1530 aa22.92■■□□□ 1.26
CHCHD6-206ENST00000513253 BICRAQ9NZM4 1560 aa22.82■■□□□ 1.24
CHCHD6-206ENST00000513253 DCAF1Q9Y4B6 1507 aa22.75■■□□□ 1.23
CHCHD6-206ENST00000513253 SCRIBQ14160 1630 aa22.69■■□□□ 1.22
CHCHD6-206ENST00000513253 SHROOM4Q9ULL8 1493 aa22.28■■□□□ 1.16
CHCHD6-206ENST00000513253 CC2D2AQ9P2K1 1620 aa22.24■■□□□ 1.15
CHCHD6-206ENST00000513253 EIF4G1Q04637 1599 aaKnown RBP22.21■■□□□ 1.15
CHCHD6-206ENST00000513253 CECR2Q9BXF3 1484 aa22.1■■□□□ 1.13
CHCHD6-206ENST00000513253 SMARCA4P51532 1647 aa21.58■■□□□ 1.04
CHCHD6-206ENST00000513253 ATAD2BQ9ULI0 1458 aa21.52■■□□□ 1.03
CHCHD6-206ENST00000513253 NCAPD3P42695 1498 aa21.47■■□□□ 1.03
CHCHD6-206ENST00000513253 BAZ1AQ9NRL2 1556 aaPredicted RBP21.43■■□□□ 1.02
CHCHD6-206ENST00000513253 MROH2BQ7Z745 1585 aa21.41■■□□□ 1.02
CHCHD6-206ENST00000513253 SMARCA2P51531 1590 aa21.4■■□□□ 1.02
CHCHD6-206ENST00000513253 HMGXB3Q12766 1538 aa21.35■■□□□ 1.01
CHCHD6-206ENST00000513253 BAZ1BQ9UIG0 1483 aaKnown RBP21.32■■□□□ 1
CHCHD6-206ENST00000513253 NESP48681 1621 aa21.27■■□□□ 1
CHCHD6-206ENST00000513253 PEG3Q9GZU2 1588 aa21.27■□□□□ 0.99
CHCHD6-206ENST00000513253 WIZO95785 1651 aa21.2■□□□□ 0.98
CHCHD6-206ENST00000513253 ERCC6Q03468 1493 aa21.19■□□□□ 0.98
CHCHD6-206ENST00000513253 RSF1Q96T23 1441 aaPredicted RBP20.99■□□□□ 0.95
CHCHD6-206ENST00000513253 CUX2O14529 1486 aa20.99■□□□□ 0.95
CHCHD6-206ENST00000513253 KIF21AQ7Z4S6 1674 aa20.98■□□□□ 0.95
CHCHD6-206ENST00000513253 LAMC3Q9Y6N6 1575 aa20.97■□□□□ 0.95
CHCHD6-206ENST00000513253 THOC2Q8NI27 1593 aaKnown RBP20.95■□□□□ 0.94
CHCHD6-206ENST00000513253 CADPSQ9ULU8 1353 aa20.85■□□□□ 0.93
CHCHD6-206ENST00000513253 TOP2AP11388 1531 aaKnown RBP20.85■□□□□ 0.93
CHCHD6-206ENST00000513253 PDS5BQ9NTI5 1447 aa20.82■□□□□ 0.92
CHCHD6-206ENST00000513253 DNAJC5Q9H3Z4 198 aa20.76■□□□□ 0.91
CHCHD6-206ENST00000513253 MRC2Q9UBG0 1479 aa20.7■□□□□ 0.9
CHCHD6-206ENST00000513253 FANCD2Q9BXW9 1451 aa20.69■□□□□ 0.9
CHCHD6-206ENST00000513253 CFTRP13569 1480 aa20.68■□□□□ 0.9
CHCHD6-206ENST00000513253 CEP164Q9UPV0 1460 aa20.67■□□□□ 0.9
CHCHD6-206ENST00000513253 WDR62O43379 1518 aa20.64■□□□□ 0.9
CHCHD6-206ENST00000513253 CCDC88BA6NC98 1476 aa20.64■□□□□ 0.89
CHCHD6-206ENST00000513253 URB2Q14146 1524 aaKnown RBP20.55■□□□□ 0.88
CHCHD6-206ENST00000513253 PRDM2Q13029 1718 aa20.52■□□□□ 0.88
CHCHD6-206ENST00000513253 TOPBP1Q92547 1522 aa20.32■□□□□ 0.84
CHCHD6-206ENST00000513253 SUPT5HO00267 1087 aaKnown RBP20.32■□□□□ 0.84
CHCHD6-206ENST00000513253 ZNF608Q9ULD9 1512 aaPredicted RBP20.29■□□□□ 0.84
CHCHD6-206ENST00000513253 DNMBPQ6XZF7 1577 aa20.24■□□□□ 0.83
CHCHD6-206ENST00000513253 IFT140Q96RY7 1462 aa20.21■□□□□ 0.83
CHCHD6-206ENST00000513253 EIF4G3O43432 1585 aaKnown RBP20.16■□□□□ 0.82
CHCHD6-206ENST00000513253 TARBP1Q13395 1621 aaKnown RBP20.14■□□□□ 0.81
CHCHD6-206ENST00000513253 POLA1P09884 1462 aaPredicted RBP20.14■□□□□ 0.81
CHCHD6-206ENST00000513253 RAD54L2Q9Y4B4 1467 aa20.13■□□□□ 0.81
CHCHD6-206ENST00000513253 ABCC8Q09428 1581 aa20.12■□□□□ 0.81
CHCHD6-206ENST00000513253 AQRO60306 1485 aaKnown RBP eCLIP20.11■□□□□ 0.81
CHCHD6-206ENST00000513253 TRIM41Q8WV44 630 aa20.1■□□□□ 0.81
CHCHD6-206ENST00000513253 CUX1P39880 1505 aa20.1■□□□□ 0.81
CHCHD6-206ENST00000513253 FGD5Q6ZNL6 1462 aa20.06■□□□□ 0.8
CHCHD6-206ENST00000513253 OSCARQ8IYS5 282 aa20.06■□□□□ 0.8
CHCHD6-206ENST00000513253 SOGA1O94964 1423 aa20.02■□□□□ 0.79
CHCHD6-206ENST00000513253 TDRD9Q8NDG6 1382 aaKnown RBP20.01■□□□□ 0.79
CHCHD6-206ENST00000513253 CHD1O14646 1710 aa19.99■□□□□ 0.79
CHCHD6-206ENST00000513253 FBLN2P98095 1184 aa19.93■□□□□ 0.78
CHCHD6-206ENST00000513253 RIMBP3CA6NJZ7 1639 aa19.92■□□□□ 0.78
CHCHD6-206ENST00000513253 RIMBP3BA6NNM3 1639 aa19.92■□□□□ 0.78
CHCHD6-206ENST00000513253 RIMBP3Q9UFD9 1639 aa19.92■□□□□ 0.78
CHCHD6-206ENST00000513253 WDR97A6NE52 1622 aa19.91■□□□□ 0.78
CHCHD6-206ENST00000513253 SNAPC4Q5SXM2 1469 aa19.91■□□□□ 0.78
CHCHD6-206ENST00000513253 SYNJ1O43426 1573 aa19.85■□□□□ 0.77
CHCHD6-206ENST00000513253 ARHGEF11O15085 1522 aa19.84■□□□□ 0.77
CHCHD6-206ENST00000513253 PBRM1Q86U86 1689 aa19.82■□□□□ 0.76
CHCHD6-206ENST00000513253 GRIN2BQ13224 1484 aa19.79■□□□□ 0.76
CHCHD6-206ENST00000513253 ABCA5Q8WWZ7 1642 aa19.79■□□□□ 0.76
CHCHD6-206ENST00000513253 BIVM-ERCC5R4GMW8 1640 aa19.78■□□□□ 0.76
CHCHD6-206ENST00000513253 GAPVD1Q14C86 1478 aa19.78■□□□□ 0.76
CHCHD6-206ENST00000513253 WRNQ14191 1432 aaPredicted RBP eCLIP19.77■□□□□ 0.76
CHCHD6-206ENST00000513253 ABCA10Q8WWZ4 1543 aa19.77■□□□□ 0.76
CHCHD6-206ENST00000513253 TOP2BQ02880 1626 aa19.76■□□□□ 0.75
CHCHD6-206ENST00000513253 MAGI1Q96QZ7 1491 aaPredicted RBP19.74■□□□□ 0.75
CHCHD6-206ENST00000513253 CHMP7Q8WUX9 453 aaPredicted RBP19.73■□□□□ 0.75
CHCHD6-206ENST00000513253 CLASP1Q7Z460 1538 aa19.71■□□□□ 0.75
CHCHD6-206ENST00000513253 SYNJ2O15056 1496 aa19.7■□□□□ 0.74
CHCHD6-206ENST00000513253 ARAP1Q96P48 1450 aa19.7■□□□□ 0.74
CHCHD6-206ENST00000513253 CYB5RLQ6IPT4 315 aa19.69■□□□□ 0.74
CHCHD6-206ENST00000513253 ADAMTS12P58397 1594 aa19.63■□□□□ 0.73
CHCHD6-206ENST00000513253 GRIN2AQ12879 1464 aa19.57■□□□□ 0.72
CHCHD6-206ENST00000513253 CEP170Q5SW79 1584 aa19.57■□□□□ 0.72
CHCHD6-206ENST00000513253 ERCC6L2Q5T890 1561 aa19.54■□□□□ 0.72
CHCHD6-206ENST00000513253 FHAD1B1AJZ9 1412 aa19.51■□□□□ 0.71
CHCHD6-206ENST00000513253 ERICH3Q5RHP9 1530 aa19.5■□□□□ 0.71
CHCHD6-206ENST00000513253 NUP160Q12769 1436 aa19.47■□□□□ 0.71
CHCHD6-206ENST00000513253 TRHP20396 242 aaPredicted RBP19.4■□□□□ 0.7
CHCHD6-206ENST00000513253 SHROOM2Q13796 1616 aa19.38■□□□□ 0.69
CHCHD6-206ENST00000513253 RUSC2Q8N2Y8 1516 aa19.35■□□□□ 0.69
CHCHD6-206ENST00000513253 IGF1RP08069 1367 aa19.34■□□□□ 0.69
CHCHD6-206ENST00000513253 KIF27Q86VH2 1401 aa19.34■□□□□ 0.69
CHCHD6-206ENST00000513253 PRG4Q92954 1404 aaPredicted RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms