RNA–Protein interactions for RNA: ENST00000513210.5

H2AFY-219, Transcript of H2A histone family member Y, humanhuman

TSL 2

Gene H2AFY, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFY-219ENST00000513210 NISCHQ9Y2I1 1504 aa30.02■■■□□ 2.4
H2AFY-219ENST00000513210 CCDC180Q9P1Z9 1646 aa26.61■■□□□ 1.85
H2AFY-219ENST00000513210 ABCC9O60706 1549 aa25.98■■□□□ 1.75
H2AFY-219ENST00000513210 ZCCHC6Q5VYS8 1495 aaKnown RBP25.05■■□□□ 1.6
H2AFY-219ENST00000513210 DCAF8L2P0C7V8 631 aa25.02■■□□□ 1.6
H2AFY-219ENST00000513210 RB1CC1Q8TDY2 1594 aa25■■□□□ 1.59
H2AFY-219ENST00000513210 NACADO15069 1562 aa24.99■■□□□ 1.59
H2AFY-219ENST00000513210 MYO15BQ96JP2 1530 aa24.86■■□□□ 1.57
H2AFY-219ENST00000513210 DCAF1Q9Y4B6 1507 aa24.82■■□□□ 1.56
H2AFY-219ENST00000513210 UNC13AQ9UPW8 1703 aa24.49■■□□□ 1.51
H2AFY-219ENST00000513210 SCRIBQ14160 1630 aa24.35■■□□□ 1.49
H2AFY-219ENST00000513210 PABPN1Q86U42 306 aaKnown RBP eCLIP24.31■■□□□ 1.48
H2AFY-219ENST00000513210 BICRAQ9NZM4 1560 aa24.29■■□□□ 1.48
H2AFY-219ENST00000513210 AEBP2Q6ZN18 517 aaPredicted RBP24.22■■□□□ 1.47
H2AFY-219ENST00000513210 SHROOM4Q9ULL8 1493 aa23.96■■□□□ 1.43
H2AFY-219ENST00000513210 DNAJC5BQ9UF47 199 aa23.78■■□□□ 1.4
H2AFY-219ENST00000513210 EIF4G1Q04637 1599 aaKnown RBP23.62■■□□□ 1.37
H2AFY-219ENST00000513210 CC2D2AQ9P2K1 1620 aa23.5■■□□□ 1.35
H2AFY-219ENST00000513210 CECR2Q9BXF3 1484 aa23.42■■□□□ 1.34
H2AFY-219ENST00000513210 SMARCA4P51532 1647 aa23.28■■□□□ 1.32
H2AFY-219ENST00000513210 BAZ1AQ9NRL2 1556 aaPredicted RBP23.24■■□□□ 1.31
H2AFY-219ENST00000513210 MROH2BQ7Z745 1585 aa23.17■■□□□ 1.3
H2AFY-219ENST00000513210 ATAD2BQ9ULI0 1458 aa23.12■■□□□ 1.29
H2AFY-219ENST00000513210 NCAPD3P42695 1498 aa23.07■■□□□ 1.28
H2AFY-219ENST00000513210 SMARCA2P51531 1590 aa23.06■■□□□ 1.28
H2AFY-219ENST00000513210 PEG3Q9GZU2 1588 aa23.04■■□□□ 1.28
H2AFY-219ENST00000513210 HMGXB3Q12766 1538 aa22.98■■□□□ 1.27
H2AFY-219ENST00000513210 WIZO95785 1651 aa22.93■■□□□ 1.26
H2AFY-219ENST00000513210 RSF1Q96T23 1441 aaPredicted RBP22.93■■□□□ 1.26
H2AFY-219ENST00000513210 BAZ1BQ9UIG0 1483 aaKnown RBP22.92■■□□□ 1.26
H2AFY-219ENST00000513210 CHIC1Q5VXU3 224 aa22.69■■□□□ 1.22
H2AFY-219ENST00000513210 TOP2AP11388 1531 aaKnown RBP22.67■■□□□ 1.22
H2AFY-219ENST00000513210 NESP48681 1621 aa22.54■■□□□ 1.2
H2AFY-219ENST00000513210 LAMC3Q9Y6N6 1575 aa22.43■■□□□ 1.18
H2AFY-219ENST00000513210 SUPT5HO00267 1087 aaKnown RBP22.43■■□□□ 1.18
H2AFY-219ENST00000513210 CCDC88BA6NC98 1476 aa22.41■■□□□ 1.18
H2AFY-219ENST00000513210 CADPSQ9ULU8 1353 aa22.4■■□□□ 1.18
H2AFY-219ENST00000513210 ERCC6Q03468 1493 aa22.34■■□□□ 1.17
H2AFY-219ENST00000513210 CFTRP13569 1480 aa22.3■■□□□ 1.16
H2AFY-219ENST00000513210 KIF21AQ7Z4S6 1674 aa22.26■■□□□ 1.15
H2AFY-219ENST00000513210 PDS5BQ9NTI5 1447 aa22.26■■□□□ 1.15
H2AFY-219ENST00000513210 THOC2Q8NI27 1593 aaKnown RBP22.16■■□□□ 1.14
H2AFY-219ENST00000513210 FANCD2Q9BXW9 1451 aa22.16■■□□□ 1.14
H2AFY-219ENST00000513210 PRDM2Q13029 1718 aa22.14■■□□□ 1.13
H2AFY-219ENST00000513210 CEP164Q9UPV0 1460 aa22.11■■□□□ 1.13
H2AFY-219ENST00000513210 MRC2Q9UBG0 1479 aa22.07■■□□□ 1.12
H2AFY-219ENST00000513210 CUX2O14529 1486 aa22.06■■□□□ 1.12
H2AFY-219ENST00000513210 WDR62O43379 1518 aa22.01■■□□□ 1.11
H2AFY-219ENST00000513210 URB2Q14146 1524 aaKnown RBP21.96■■□□□ 1.11
H2AFY-219ENST00000513210 TOPBP1Q92547 1522 aa21.83■■□□□ 1.09
H2AFY-219ENST00000513210 DNMBPQ6XZF7 1577 aa21.81■■□□□ 1.08
H2AFY-219ENST00000513210 ABCC8Q09428 1581 aa21.76■■□□□ 1.07
H2AFY-219ENST00000513210 CUX1P39880 1505 aa21.73■■□□□ 1.07
H2AFY-219ENST00000513210 POLA1P09884 1462 aaPredicted RBP21.65■■□□□ 1.06
H2AFY-219ENST00000513210 IFT140Q96RY7 1462 aa21.64■■□□□ 1.05
H2AFY-219ENST00000513210 FGD5Q6ZNL6 1462 aa21.63■■□□□ 1.05
H2AFY-219ENST00000513210 WRNQ14191 1432 aaPredicted RBP eCLIP21.6■■□□□ 1.05
H2AFY-219ENST00000513210 TARBP1Q13395 1621 aaKnown RBP21.59■■□□□ 1.05
H2AFY-219ENST00000513210 SYNJ1O43426 1573 aa21.59■■□□□ 1.05
H2AFY-219ENST00000513210 ZNF608Q9ULD9 1512 aaPredicted RBP21.59■■□□□ 1.05
H2AFY-219ENST00000513210 RAD54L2Q9Y4B4 1467 aa21.58■■□□□ 1.05
H2AFY-219ENST00000513210 TOP2BQ02880 1626 aa21.55■■□□□ 1.04
H2AFY-219ENST00000513210 BIVM-ERCC5R4GMW8 1640 aa21.55■■□□□ 1.04
H2AFY-219ENST00000513210 SOGA1O94964 1423 aa21.55■■□□□ 1.04
H2AFY-219ENST00000513210 EIF4G3O43432 1585 aaKnown RBP21.49■■□□□ 1.03
H2AFY-219ENST00000513210 AQRO60306 1485 aaKnown RBP eCLIP21.46■■□□□ 1.032e-6■■■□□ 15.6
H2AFY-219ENST00000513210 WDR97A6NE52 1622 aa21.45■■□□□ 1.02
H2AFY-219ENST00000513210 TDRD9Q8NDG6 1382 aaKnown RBP21.44■■□□□ 1.02
H2AFY-219ENST00000513210 ABCA10Q8WWZ4 1543 aa21.4■■□□□ 1.02
H2AFY-219ENST00000513210 ABCA5Q8WWZ7 1642 aa21.33■■□□□ 1
H2AFY-219ENST00000513210 GAPVD1Q14C86 1478 aa21.3■■□□□ 1
H2AFY-219ENST00000513210 PBRM1Q86U86 1689 aa21.28■■□□□ 1
H2AFY-219ENST00000513210 GRIN2BQ13224 1484 aa21.27■■□□□ 1
H2AFY-219ENST00000513210 SNAPC4Q5SXM2 1469 aa21.26■□□□□ 0.99
H2AFY-219ENST00000513210 DNAJC5Q9H3Z4 198 aa21.25■□□□□ 0.99
H2AFY-219ENST00000513210 CHD1O14646 1710 aa21.2■□□□□ 0.98
H2AFY-219ENST00000513210 MAGI1Q96QZ7 1491 aaPredicted RBP21.2■□□□□ 0.98
H2AFY-219ENST00000513210 FBLN2P98095 1184 aa21.14■□□□□ 0.97
H2AFY-219ENST00000513210 OSCARQ8IYS5 282 aa21.14■□□□□ 0.97
H2AFY-219ENST00000513210 TRIM41Q8WV44 630 aa21.14■□□□□ 0.97
H2AFY-219ENST00000513210 ERICH3Q5RHP9 1530 aa21.14■□□□□ 0.97
H2AFY-219ENST00000513210 SYNJ2O15056 1496 aa21.13■□□□□ 0.97
H2AFY-219ENST00000513210 ADAMTS12P58397 1594 aa21.12■□□□□ 0.97
H2AFY-219ENST00000513210 KIF27Q86VH2 1401 aa21.12■□□□□ 0.97
H2AFY-219ENST00000513210 CHMP7Q8WUX9 453 aaPredicted RBP21.08■□□□□ 0.97
H2AFY-219ENST00000513210 FHAD1B1AJZ9 1412 aa21.05■□□□□ 0.96
H2AFY-219ENST00000513210 IGF1RP08069 1367 aa21.05■□□□□ 0.96
H2AFY-219ENST00000513210 RUSC2Q8N2Y8 1516 aa21.04■□□□□ 0.96
H2AFY-219ENST00000513210 GRIN2AQ12879 1464 aa21.02■□□□□ 0.96
H2AFY-219ENST00000513210 CLASP1Q7Z460 1538 aa20.98■□□□□ 0.95
H2AFY-219ENST00000513210 CUL7Q14999 1698 aa20.96■□□□□ 0.95
H2AFY-219ENST00000513210 CEP170Q5SW79 1584 aa20.94■□□□□ 0.94
H2AFY-219ENST00000513210 NUP160Q12769 1436 aa20.92■□□□□ 0.94
H2AFY-219ENST00000513210 CARMIL1Q5VZK9 1371 aa20.91■□□□□ 0.94
H2AFY-219ENST00000513210 RIMBP3CA6NJZ7 1639 aa20.86■□□□□ 0.93
H2AFY-219ENST00000513210 RIMBP3BA6NNM3 1639 aa20.86■□□□□ 0.93
H2AFY-219ENST00000513210 RIMBP3Q9UFD9 1639 aa20.86■□□□□ 0.93
H2AFY-219ENST00000513210 ARHGEF11O15085 1522 aa20.86■□□□□ 0.93
H2AFY-219ENST00000513210 RAPGEF2Q9Y4G8 1499 aa20.8■□□□□ 0.92
H2AFY-219ENST00000513210 SENP3Q9H4L4 574 aaPredicted RBP20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms