RNA–Protein interactions for RNA: ENST00000513166.1

FGFR4-214, Transcript of fibroblast growth factor receptor 4, humanhuman

TSL 4

Gene FGFR4, Length 594 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR4-214ENST00000513166 NISCHQ9Y2I1 1504 aa51.47■■■■■ 5.83
FGFR4-214ENST00000513166 CCDC180Q9P1Z9 1646 aa45.64■■■■■ 4.9
FGFR4-214ENST00000513166 ABCC9O60706 1549 aa44.45■■■■■ 4.71
FGFR4-214ENST00000513166 DCAF8L2P0C7V8 631 aa42.96■■■■■ 4.47
FGFR4-214ENST00000513166 NACADO15069 1562 aa42.9■■■■■ 4.46
FGFR4-214ENST00000513166 RB1CC1Q8TDY2 1594 aa42.88■■■■■ 4.45
FGFR4-214ENST00000513166 ZCCHC6Q5VYS8 1495 aaKnown RBP42.87■■■■■ 4.45
FGFR4-214ENST00000513166 MYO15BQ96JP2 1530 aa42.73■■■■■ 4.43
FGFR4-214ENST00000513166 DCAF1Q9Y4B6 1507 aa42.61■■■■■ 4.41
FGFR4-214ENST00000513166 UNC13AQ9UPW8 1703 aa41.89■■■■■ 4.3
FGFR4-214ENST00000513166 PABPN1Q86U42 306 aaKnown RBP eCLIP41.61■■■■■ 4.25
FGFR4-214ENST00000513166 SCRIBQ14160 1630 aa41.61■■■■■ 4.25
FGFR4-214ENST00000513166 BICRAQ9NZM4 1560 aa41.56■■■■■ 4.24
FGFR4-214ENST00000513166 SHROOM4Q9ULL8 1493 aa41.15■■■■■ 4.18
FGFR4-214ENST00000513166 DNAJC5BQ9UF47 199 aa40.68■■■■■ 4.1
FGFR4-214ENST00000513166 EIF4G1Q04637 1599 aaKnown RBP40.44■■■■■ 4.06
FGFR4-214ENST00000513166 CC2D2AQ9P2K1 1620 aa40.23■■■■■ 4.03
FGFR4-214ENST00000513166 CECR2Q9BXF3 1484 aa40.05■■■■■ 4
FGFR4-214ENST00000513166 BAZ1AQ9NRL2 1556 aaPredicted RBP39.86■■■■□ 3.97
FGFR4-214ENST00000513166 SMARCA4P51532 1647 aa39.86■■■■□ 3.97
FGFR4-214ENST00000513166 MROH2BQ7Z745 1585 aa39.64■■■■□ 3.94
FGFR4-214ENST00000513166 ATAD2BQ9ULI0 1458 aa39.62■■■■□ 3.93
FGFR4-214ENST00000513166 NCAPD3P42695 1498 aa39.61■■■■□ 3.93
FGFR4-214ENST00000513166 SMARCA2P51531 1590 aa39.59■■■■□ 3.93
FGFR4-214ENST00000513166 PEG3Q9GZU2 1588 aa39.5■■■■□ 3.91
FGFR4-214ENST00000513166 HMGXB3Q12766 1538 aa39.37■■■■□ 3.89
FGFR4-214ENST00000513166 RSF1Q96T23 1441 aaPredicted RBP39.3■■■■□ 3.88
FGFR4-214ENST00000513166 BAZ1BQ9UIG0 1483 aaKnown RBP39.29■■■■□ 3.88
FGFR4-214ENST00000513166 WIZO95785 1651 aa39.22■■■■□ 3.87
FGFR4-214ENST00000513166 TOP2AP11388 1531 aaKnown RBP38.81■■■■□ 3.8
FGFR4-214ENST00000513166 NESP48681 1621 aa38.52■■■■□ 3.76
FGFR4-214ENST00000513166 LAMC3Q9Y6N6 1575 aa38.49■■■■□ 3.75
FGFR4-214ENST00000513166 SUPT5HO00267 1087 aaKnown RBP38.46■■■■□ 3.75
FGFR4-214ENST00000513166 CADPSQ9ULU8 1353 aa38.45■■■■□ 3.75
FGFR4-214ENST00000513166 CCDC88BA6NC98 1476 aa38.4■■■■□ 3.74
FGFR4-214ENST00000513166 ERCC6Q03468 1493 aa38.29■■■■□ 3.72
FGFR4-214ENST00000513166 CFTRP13569 1480 aa38.25■■■■□ 3.71
FGFR4-214ENST00000513166 PDS5BQ9NTI5 1447 aa38.25■■■■□ 3.71
FGFR4-214ENST00000513166 KIF21AQ7Z4S6 1674 aa38.07■■■■□ 3.68
FGFR4-214ENST00000513166 FANCD2Q9BXW9 1451 aa37.97■■■■□ 3.67
FGFR4-214ENST00000513166 PRDM2Q13029 1718 aa37.95■■■■□ 3.67
FGFR4-214ENST00000513166 CEP164Q9UPV0 1460 aa37.9■■■■□ 3.66
FGFR4-214ENST00000513166 THOC2Q8NI27 1593 aaKnown RBP37.86■■■■□ 3.65
FGFR4-214ENST00000513166 CUX2O14529 1486 aa37.84■■■■□ 3.65
FGFR4-214ENST00000513166 MRC2Q9UBG0 1479 aa37.8■■■■□ 3.64
FGFR4-214ENST00000513166 WDR62O43379 1518 aa37.66■■■■□ 3.62
FGFR4-214ENST00000513166 URB2Q14146 1524 aaKnown RBP37.56■■■■□ 3.6
FGFR4-214ENST00000513166 ABCC8Q09428 1581 aa37.47■■■■□ 3.59
FGFR4-214ENST00000513166 TOPBP1Q92547 1522 aa37.39■■■■□ 3.58
FGFR4-214ENST00000513166 DNMBPQ6XZF7 1577 aa37.35■■■■□ 3.57
FGFR4-214ENST00000513166 CUX1P39880 1505 aa37.17■■■■□ 3.54
FGFR4-214ENST00000513166 IFT140Q96RY7 1462 aa37.12■■■■□ 3.53
FGFR4-214ENST00000513166 POLA1P09884 1462 aaPredicted RBP37.07■■■■□ 3.53
FGFR4-214ENST00000513166 WRNQ14191 1432 aaPredicted RBP eCLIP37.03■■■■□ 3.52
FGFR4-214ENST00000513166 FGD5Q6ZNL6 1462 aa37.01■■■■□ 3.52
FGFR4-214ENST00000513166 SOGA1O94964 1423 aa36.98■■■■□ 3.51
FGFR4-214ENST00000513166 TARBP1Q13395 1621 aaKnown RBP36.97■■■■□ 3.51
FGFR4-214ENST00000513166 TOP2BQ02880 1626 aa36.92■■■■□ 3.5
FGFR4-214ENST00000513166 RAD54L2Q9Y4B4 1467 aa36.91■■■■□ 3.5
FGFR4-214ENST00000513166 BIVM-ERCC5R4GMW8 1640 aa36.91■■■■□ 3.5
FGFR4-214ENST00000513166 ZNF608Q9ULD9 1512 aaPredicted RBP36.9■■■■□ 3.5
FGFR4-214ENST00000513166 SYNJ1O43426 1573 aa36.88■■■■□ 3.49
FGFR4-214ENST00000513166 AQRO60306 1485 aaKnown RBP eCLIP36.75■■■■□ 3.479e-11■■■■■ 80
FGFR4-214ENST00000513166 EIF4G3O43432 1585 aaKnown RBP36.74■■■■□ 3.47
FGFR4-214ENST00000513166 TDRD9Q8NDG6 1382 aaKnown RBP36.72■■■■□ 3.47
FGFR4-214ENST00000513166 WDR97A6NE52 1622 aa36.7■■■■□ 3.47
FGFR4-214ENST00000513166 ABCA10Q8WWZ4 1543 aa36.69■■■■□ 3.46
FGFR4-214ENST00000513166 GAPVD1Q14C86 1478 aa36.54■■■■□ 3.44
FGFR4-214ENST00000513166 DNAJC5Q9H3Z4 198 aa36.53■■■■□ 3.44
FGFR4-214ENST00000513166 GRIN2BQ13224 1484 aa36.5■■■■□ 3.43
FGFR4-214ENST00000513166 ABCA5Q8WWZ7 1642 aa36.48■■■■□ 3.43
FGFR4-214ENST00000513166 OSCARQ8IYS5 282 aa36.4■■■■□ 3.42
FGFR4-214ENST00000513166 PBRM1Q86U86 1689 aa36.39■■■■□ 3.42
FGFR4-214ENST00000513166 SNAPC4Q5SXM2 1469 aa36.37■■■■□ 3.41
FGFR4-214ENST00000513166 MAGI1Q96QZ7 1491 aaPredicted RBP36.37■■■■□ 3.41
FGFR4-214ENST00000513166 TRIM41Q8WV44 630 aa36.36■■■■□ 3.41
FGFR4-214ENST00000513166 FBLN2P98095 1184 aa36.29■■■■□ 3.4
FGFR4-214ENST00000513166 KIF27Q86VH2 1401 aa36.26■■■■□ 3.4
FGFR4-214ENST00000513166 ERICH3Q5RHP9 1530 aa36.26■■■■□ 3.4
FGFR4-214ENST00000513166 CHD1O14646 1710 aa36.25■■■■□ 3.39
FGFR4-214ENST00000513166 CHMP7Q8WUX9 453 aaPredicted RBP36.25■■■■□ 3.39
FGFR4-214ENST00000513166 SYNJ2O15056 1496 aa36.23■■■■□ 3.39
FGFR4-214ENST00000513166 FHAD1B1AJZ9 1412 aa36.13■■■■□ 3.37
FGFR4-214ENST00000513166 IGF1RP08069 1367 aa36.12■■■■□ 3.37
FGFR4-214ENST00000513166 ADAMTS12P58397 1594 aa36.1■■■■□ 3.37
FGFR4-214ENST00000513166 CHIC1Q5VXU3 224 aa36.04■■■■□ 3.36
FGFR4-214ENST00000513166 GRIN2AQ12879 1464 aa36.01■■■■□ 3.36
FGFR4-214ENST00000513166 RUSC2Q8N2Y8 1516 aa35.97■■■■□ 3.35
FGFR4-214ENST00000513166 CUL7Q14999 1698 aa35.95■■■■□ 3.35
FGFR4-214ENST00000513166 CARMIL1Q5VZK9 1371 aa35.89■■■■□ 3.34
FGFR4-214ENST00000513166 CLASP1Q7Z460 1538 aa35.88■■■■□ 3.33
FGFR4-214ENST00000513166 NUP160Q12769 1436 aa35.85■■■■□ 3.33
FGFR4-214ENST00000513166 CEP170Q5SW79 1584 aa35.8■■■■□ 3.32
FGFR4-214ENST00000513166 EEA1Q15075 1411 aa35.71■■■■□ 3.31
FGFR4-214ENST00000513166 ARHGEF11O15085 1522 aa35.7■■■■□ 3.31
FGFR4-214ENST00000513166 CSRNP3Q8WYN3 585 aa35.69■■■■□ 3.3
FGFR4-214ENST00000513166 RIMBP3CA6NJZ7 1639 aa35.68■■■■□ 3.3
FGFR4-214ENST00000513166 RIMBP3BA6NNM3 1639 aa35.68■■■■□ 3.3
FGFR4-214ENST00000513166 RIMBP3Q9UFD9 1639 aa35.68■■■■□ 3.3
FGFR4-214ENST00000513166 RAPGEF2Q9Y4G8 1499 aa35.68■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms