RNA–Protein interactions for RNA: ENST00000512922.5

CDK18-221, Transcript of cyclin dependent kinase 18, humanhuman

TSL 2

Gene CDK18, Length 1,134 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK18-221ENST00000512922 NISCHQ9Y2I1 1504 aa42.34■■■■■ 4.37
CDK18-221ENST00000512922 CCDC180Q9P1Z9 1646 aa37.26■■■■□ 3.56
CDK18-221ENST00000512922 ZCCHC6Q5VYS8 1495 aaKnown RBP35.54■■■■□ 3.28
CDK18-221ENST00000512922 ABCC9O60706 1549 aa35.3■■■■□ 3.24
CDK18-221ENST00000512922 DCAF1Q9Y4B6 1507 aa35.08■■■■□ 3.21
CDK18-221ENST00000512922 MYO15BQ96JP2 1530 aa34.81■■■■□ 3.16
CDK18-221ENST00000512922 NACADO15069 1562 aa34.66■■■■□ 3.14
CDK18-221ENST00000512922 DCAF8L2P0C7V8 631 aa34.65■■■■□ 3.14
CDK18-221ENST00000512922 RB1CC1Q8TDY2 1594 aa34.44■■■■□ 3.1
CDK18-221ENST00000512922 SCRIBQ14160 1630 aa34.07■■■■□ 3.04
CDK18-221ENST00000512922 SHROOM4Q9ULL8 1493 aa34.03■■■■□ 3.04
CDK18-221ENST00000512922 UNC13AQ9UPW8 1703 aa33.94■■■■□ 3.02
CDK18-221ENST00000512922 BICRAQ9NZM4 1560 aa33.5■■■□□ 2.95
CDK18-221ENST00000512922 PABPN1Q86U42 306 aaKnown RBP eCLIP33.07■■■□□ 2.88
CDK18-221ENST00000512922 CECR2Q9BXF3 1484 aa32.89■■■□□ 2.86
CDK18-221ENST00000512922 BAZ1AQ9NRL2 1556 aaPredicted RBP32.72■■■□□ 2.83
CDK18-221ENST00000512922 MROH2BQ7Z745 1585 aa32.69■■■□□ 2.82
CDK18-221ENST00000512922 SMARCA4P51532 1647 aa32.69■■■□□ 2.82
CDK18-221ENST00000512922 RSF1Q96T23 1441 aaPredicted RBP32.63■■■□□ 2.81
CDK18-221ENST00000512922 DNAJC5BQ9UF47 199 aa32.56■■■□□ 2.8
CDK18-221ENST00000512922 SUPT5HO00267 1087 aaKnown RBP32.46■■■□□ 2.79
CDK18-221ENST00000512922 WIZO95785 1651 aa32.45■■■□□ 2.79
CDK18-221ENST00000512922 EIF4G1Q04637 1599 aaKnown RBP32.45■■■□□ 2.78
CDK18-221ENST00000512922 PEG3Q9GZU2 1588 aa32.34■■■□□ 2.77
CDK18-221ENST00000512922 ATAD2BQ9ULI0 1458 aa32.15■■■□□ 2.74
CDK18-221ENST00000512922 SMARCA2P51531 1590 aa32.15■■■□□ 2.74
CDK18-221ENST00000512922 TOP2AP11388 1531 aaKnown RBP32.1■■■□□ 2.73
CDK18-221ENST00000512922 CC2D2AQ9P2K1 1620 aa32.06■■■□□ 2.72
CDK18-221ENST00000512922 HMGXB3Q12766 1538 aa31.95■■■□□ 2.71
CDK18-221ENST00000512922 NCAPD3P42695 1498 aa31.92■■■□□ 2.7
CDK18-221ENST00000512922 BAZ1BQ9UIG0 1483 aaKnown RBP31.91■■■□□ 2.7
CDK18-221ENST00000512922 CCDC88BA6NC98 1476 aa31.67■■■□□ 2.66
CDK18-221ENST00000512922 PRDM2Q13029 1718 aa31.21■■■□□ 2.59
CDK18-221ENST00000512922 CFTRP13569 1480 aa31.12■■■□□ 2.57
CDK18-221ENST00000512922 CADPSQ9ULU8 1353 aa31.01■■■□□ 2.55
CDK18-221ENST00000512922 CHIC1Q5VXU3 224 aa31■■■□□ 2.55
CDK18-221ENST00000512922 LAMC3Q9Y6N6 1575 aa30.97■■■□□ 2.55
CDK18-221ENST00000512922 NESP48681 1621 aa30.93■■■□□ 2.54
CDK18-221ENST00000512922 ABCC8Q09428 1581 aa30.92■■■□□ 2.54
CDK18-221ENST00000512922 SYNJ1O43426 1573 aa30.73■■■□□ 2.51
CDK18-221ENST00000512922 FANCD2Q9BXW9 1451 aa30.71■■■□□ 2.51
CDK18-221ENST00000512922 KIF21AQ7Z4S6 1674 aa30.71■■■□□ 2.51
CDK18-221ENST00000512922 WRNQ14191 1432 aaPredicted RBP eCLIP30.7■■■□□ 2.5
CDK18-221ENST00000512922 BIVM-ERCC5R4GMW8 1640 aa30.68■■■□□ 2.5
CDK18-221ENST00000512922 TOP2BQ02880 1626 aa30.63■■■□□ 2.49
CDK18-221ENST00000512922 CUX1P39880 1505 aa30.61■■■□□ 2.49
CDK18-221ENST00000512922 PDS5BQ9NTI5 1447 aa30.58■■■□□ 2.49
CDK18-221ENST00000512922 CEP164Q9UPV0 1460 aa30.57■■■□□ 2.48
CDK18-221ENST00000512922 TRIM41Q8WV44 630 aa30.56■■■□□ 2.48
CDK18-221ENST00000512922 DNMBPQ6XZF7 1577 aa30.47■■■□□ 2.47
CDK18-221ENST00000512922 URB2Q14146 1524 aaKnown RBP30.42■■■□□ 2.46
CDK18-221ENST00000512922 TOPBP1Q92547 1522 aa30.39■■■□□ 2.46
CDK18-221ENST00000512922 ERCC6Q03468 1493 aa30.32■■■□□ 2.44
CDK18-221ENST00000512922 THOC2Q8NI27 1593 aaKnown RBP30.32■■■□□ 2.44
CDK18-221ENST00000512922 MRC2Q9UBG0 1479 aa30.31■■■□□ 2.44
CDK18-221ENST00000512922 FGD5Q6ZNL6 1462 aa30.29■■■□□ 2.44
CDK18-221ENST00000512922 WDR62O43379 1518 aa30.25■■■□□ 2.43
CDK18-221ENST00000512922 POLA1P09884 1462 aaPredicted RBP30.2■■■□□ 2.43
CDK18-221ENST00000512922 SOGA1O94964 1423 aa30.18■■■□□ 2.42
CDK18-221ENST00000512922 WDR97A6NE52 1622 aa30.18■■■□□ 2.42
CDK18-221ENST00000512922 RUSC2Q8N2Y8 1516 aa30.14■■■□□ 2.42
CDK18-221ENST00000512922 CUX2O14529 1486 aa30.09■■■□□ 2.41
CDK18-221ENST00000512922 EEA1Q15075 1411 aa30.07■■■□□ 2.4
CDK18-221ENST00000512922 TARBP1Q13395 1621 aaKnown RBP30.06■■■□□ 2.4
CDK18-221ENST00000512922 RAD54L2Q9Y4B4 1467 aa30.05■■■□□ 2.4
CDK18-221ENST00000512922 ABCA10Q8WWZ4 1543 aa30.03■■■□□ 2.4
CDK18-221ENST00000512922 FAM9AQ8IZU1 332 aaPredicted RBP29.96■■■□□ 2.39
CDK18-221ENST00000512922 ABCA5Q8WWZ7 1642 aa29.93■■■□□ 2.38
CDK18-221ENST00000512922 KIF27Q86VH2 1401 aa29.92■■■□□ 2.38
CDK18-221ENST00000512922 IFT140Q96RY7 1462 aa29.87■■■□□ 2.37
CDK18-221ENST00000512922 KIF21BO75037 1637 aa29.84■■■□□ 2.37
CDK18-221ENST00000512922 CSRNP3Q8WYN3 585 aa29.8■■■□□ 2.36
CDK18-221ENST00000512922 PBRM1Q86U86 1689 aa29.78■■■□□ 2.36
CDK18-221ENST00000512922 EIF4G3O43432 1585 aaKnown RBP29.73■■■□□ 2.35
CDK18-221ENST00000512922 ZNF608Q9ULD9 1512 aaPredicted RBP29.72■■■□□ 2.35
CDK18-221ENST00000512922 PRXQ9BXM0 1461 aa29.72■■■□□ 2.35
CDK18-221ENST00000512922 LOC105371045A0A1W2PR82 267 aa29.71■■■□□ 2.35
CDK18-221ENST00000512922 GAPVD1Q14C86 1478 aa29.7■■■□□ 2.35
CDK18-221ENST00000512922 TDRD9Q8NDG6 1382 aaKnown RBP29.7■■■□□ 2.35
CDK18-221ENST00000512922 IGF1RP08069 1367 aa29.69■■■□□ 2.34
CDK18-221ENST00000512922 ERICH3Q5RHP9 1530 aa29.69■■■□□ 2.34
CDK18-221ENST00000512922 CUL7Q14999 1698 aa29.69■■■□□ 2.34
CDK18-221ENST00000512922 GOLGA3Q08378 1498 aa29.65■■■□□ 2.34
CDK18-221ENST00000512922 RAPGEF2Q9Y4G8 1499 aa29.62■■■□□ 2.33
CDK18-221ENST00000512922 AQRO60306 1485 aaKnown RBP eCLIP29.61■■■□□ 2.33
CDK18-221ENST00000512922 DNAJC5Q9H3Z4 198 aa29.61■■■□□ 2.33
CDK18-221ENST00000512922 ADAMTS12P58397 1594 aa29.55■■■□□ 2.32
CDK18-221ENST00000512922 GRIN2BQ13224 1484 aa29.55■■■□□ 2.32
CDK18-221ENST00000512922 CARMIL1Q5VZK9 1371 aa29.51■■■□□ 2.31
CDK18-221ENST00000512922 EHMT2Q96KQ7 1210 aa29.49■■■□□ 2.31
CDK18-221ENST00000512922 TNIKQ9UKE5 1360 aa29.44■■■□□ 2.3
CDK18-221ENST00000512922 SNAPC4Q5SXM2 1469 aa29.42■■■□□ 2.3
CDK18-221ENST00000512922 FHAD1B1AJZ9 1412 aa29.38■■■□□ 2.29
CDK18-221ENST00000512922 CTTNBP2Q8WZ74 1663 aa29.37■■■□□ 2.29
CDK18-221ENST00000512922 MAGI1Q96QZ7 1491 aaPredicted RBP29.37■■■□□ 2.29
CDK18-221ENST00000512922 UBTFP17480 764 aaKnown RBP29.28■■■□□ 2.28
CDK18-221ENST00000512922 CEP162Q5TB80 1403 aa29.27■■■□□ 2.28
CDK18-221ENST00000512922 SYNJ2O15056 1496 aa29.25■■■□□ 2.27
CDK18-221ENST00000512922 GRIN2AQ12879 1464 aa29.22■■■□□ 2.27
CDK18-221ENST00000512922 CHD1O14646 1710 aa29.2■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms