RNA–Protein interactions for RNA: ENST00000512878.1

RHOBTB3-213, Transcript of Rho related BTB domain containing 3, humanhuman

TSL 2

Gene RHOBTB3, Length 483 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOBTB3-213ENST00000512878 NISCHQ9Y2I1 1504 aa31.84■■■□□ 2.69
RHOBTB3-213ENST00000512878 CCDC180Q9P1Z9 1646 aa28.5■■■□□ 2.15
RHOBTB3-213ENST00000512878 ABCC9O60706 1549 aa28.2■■■□□ 2.1
RHOBTB3-213ENST00000512878 RB1CC1Q8TDY2 1594 aa26.88■■□□□ 1.89
RHOBTB3-213ENST00000512878 NACADO15069 1562 aa26.79■■□□□ 1.88
RHOBTB3-213ENST00000512878 DCAF8L2P0C7V8 631 aa26.69■■□□□ 1.86
RHOBTB3-213ENST00000512878 MYO15BQ96JP2 1530 aa26.55■■□□□ 1.84
RHOBTB3-213ENST00000512878 UNC13AQ9UPW8 1703 aa26.48■■□□□ 1.83
RHOBTB3-213ENST00000512878 ZCCHC6Q5VYS8 1495 aaKnown RBP26.48■■□□□ 1.83
RHOBTB3-213ENST00000512878 DCAF1Q9Y4B6 1507 aa26.34■■□□□ 1.81
RHOBTB3-213ENST00000512878 PABPN1Q86U42 306 aaKnown RBP eCLIP26.31■■□□□ 1.8
RHOBTB3-213ENST00000512878 DNAJC5BQ9UF47 199 aa26.31■■□□□ 1.8
RHOBTB3-213ENST00000512878 BICRAQ9NZM4 1560 aa26.16■■□□□ 1.78
RHOBTB3-213ENST00000512878 SCRIBQ14160 1630 aa25.93■■□□□ 1.74
RHOBTB3-213ENST00000512878 SHROOM4Q9ULL8 1493 aa25.76■■□□□ 1.71
RHOBTB3-213ENST00000512878 CC2D2AQ9P2K1 1620 aa25.46■■□□□ 1.67
RHOBTB3-213ENST00000512878 EIF4G1Q04637 1599 aaKnown RBP25.45■■□□□ 1.66
RHOBTB3-213ENST00000512878 CECR2Q9BXF3 1484 aa25.34■■□□□ 1.65
RHOBTB3-213ENST00000512878 SMARCA4P51532 1647 aa24.8■■□□□ 1.56
RHOBTB3-213ENST00000512878 NCAPD3P42695 1498 aa24.7■■□□□ 1.55
RHOBTB3-213ENST00000512878 BAZ1AQ9NRL2 1556 aaPredicted RBP24.68■■□□□ 1.54
RHOBTB3-213ENST00000512878 ATAD2BQ9ULI0 1458 aa24.68■■□□□ 1.54
RHOBTB3-213ENST00000512878 SMARCA2P51531 1590 aa24.63■■□□□ 1.53
RHOBTB3-213ENST00000512878 HMGXB3Q12766 1538 aa24.6■■□□□ 1.53
RHOBTB3-213ENST00000512878 PEG3Q9GZU2 1588 aa24.58■■□□□ 1.52
RHOBTB3-213ENST00000512878 MROH2BQ7Z745 1585 aa24.54■■□□□ 1.52
RHOBTB3-213ENST00000512878 BAZ1BQ9UIG0 1483 aaKnown RBP24.44■■□□□ 1.5
RHOBTB3-213ENST00000512878 NESP48681 1621 aa24.32■■□□□ 1.48
RHOBTB3-213ENST00000512878 WIZO95785 1651 aa24.32■■□□□ 1.48
RHOBTB3-213ENST00000512878 ERCC6Q03468 1493 aa24.26■■□□□ 1.47
RHOBTB3-213ENST00000512878 LAMC3Q9Y6N6 1575 aa24.12■■□□□ 1.45
RHOBTB3-213ENST00000512878 RSF1Q96T23 1441 aaPredicted RBP24.12■■□□□ 1.45
RHOBTB3-213ENST00000512878 CUX2O14529 1486 aa24.1■■□□□ 1.45
RHOBTB3-213ENST00000512878 KIF21AQ7Z4S6 1674 aa24.03■■□□□ 1.44
RHOBTB3-213ENST00000512878 THOC2Q8NI27 1593 aaKnown RBP23.99■■□□□ 1.43
RHOBTB3-213ENST00000512878 TOP2AP11388 1531 aaKnown RBP23.98■■□□□ 1.43
RHOBTB3-213ENST00000512878 CADPSQ9ULU8 1353 aa23.93■■□□□ 1.42
RHOBTB3-213ENST00000512878 PDS5BQ9NTI5 1447 aa23.89■■□□□ 1.41
RHOBTB3-213ENST00000512878 DNAJC5Q9H3Z4 198 aa23.86■■□□□ 1.41
RHOBTB3-213ENST00000512878 CFTRP13569 1480 aa23.77■■□□□ 1.4
RHOBTB3-213ENST00000512878 PRDM2Q13029 1718 aa23.76■■□□□ 1.39
RHOBTB3-213ENST00000512878 MRC2Q9UBG0 1479 aa23.73■■□□□ 1.39
RHOBTB3-213ENST00000512878 WDR62O43379 1518 aa23.69■■□□□ 1.38
RHOBTB3-213ENST00000512878 CCDC88BA6NC98 1476 aa23.68■■□□□ 1.38
RHOBTB3-213ENST00000512878 FANCD2Q9BXW9 1451 aa23.68■■□□□ 1.38
RHOBTB3-213ENST00000512878 CEP164Q9UPV0 1460 aa23.67■■□□□ 1.38
RHOBTB3-213ENST00000512878 URB2Q14146 1524 aaKnown RBP23.54■■□□□ 1.36
RHOBTB3-213ENST00000512878 TOPBP1Q92547 1522 aa23.3■■□□□ 1.32
RHOBTB3-213ENST00000512878 DNMBPQ6XZF7 1577 aa23.26■■□□□ 1.31
RHOBTB3-213ENST00000512878 ZNF608Q9ULD9 1512 aaPredicted RBP23.23■■□□□ 1.31
RHOBTB3-213ENST00000512878 ABCC8Q09428 1581 aa23.23■■□□□ 1.31
RHOBTB3-213ENST00000512878 SUPT5HO00267 1087 aaKnown RBP23.2■■□□□ 1.3
RHOBTB3-213ENST00000512878 IFT140Q96RY7 1462 aa23.17■■□□□ 1.3
RHOBTB3-213ENST00000512878 TARBP1Q13395 1621 aaKnown RBP23.13■■□□□ 1.29
RHOBTB3-213ENST00000512878 POLA1P09884 1462 aaPredicted RBP23.08■■□□□ 1.29
RHOBTB3-213ENST00000512878 EIF4G3O43432 1585 aaKnown RBP23.08■■□□□ 1.29
RHOBTB3-213ENST00000512878 CUX1P39880 1505 aa23.04■■□□□ 1.28
RHOBTB3-213ENST00000512878 OSCARQ8IYS5 282 aa23.03■■□□□ 1.28
RHOBTB3-213ENST00000512878 RAD54L2Q9Y4B4 1467 aa23.03■■□□□ 1.28
RHOBTB3-213ENST00000512878 AQRO60306 1485 aaKnown RBP eCLIP23.02■■□□□ 1.283e-7■■■■□ 25.7
RHOBTB3-213ENST00000512878 FGD5Q6ZNL6 1462 aa22.98■■□□□ 1.27
RHOBTB3-213ENST00000512878 TRIM41Q8WV44 630 aa22.97■■□□□ 1.27
RHOBTB3-213ENST00000512878 SOGA1O94964 1423 aa22.93■■□□□ 1.26
RHOBTB3-213ENST00000512878 WDR97A6NE52 1622 aa22.93■■□□□ 1.26
RHOBTB3-213ENST00000512878 CHD1O14646 1710 aa22.91■■□□□ 1.26
RHOBTB3-213ENST00000512878 TDRD9Q8NDG6 1382 aaKnown RBP22.9■■□□□ 1.26
RHOBTB3-213ENST00000512878 BIVM-ERCC5R4GMW8 1640 aa22.82■■□□□ 1.24
RHOBTB3-213ENST00000512878 RIMBP3CA6NJZ7 1639 aa22.81■■□□□ 1.24
RHOBTB3-213ENST00000512878 RIMBP3BA6NNM3 1639 aa22.81■■□□□ 1.24
RHOBTB3-213ENST00000512878 RIMBP3Q9UFD9 1639 aa22.81■■□□□ 1.24
RHOBTB3-213ENST00000512878 TOP2BQ02880 1626 aa22.79■■□□□ 1.24
RHOBTB3-213ENST00000512878 PBRM1Q86U86 1689 aa22.78■■□□□ 1.24
RHOBTB3-213ENST00000512878 SYNJ1O43426 1573 aa22.78■■□□□ 1.24
RHOBTB3-213ENST00000512878 FBLN2P98095 1184 aa22.78■■□□□ 1.24
RHOBTB3-213ENST00000512878 SNAPC4Q5SXM2 1469 aa22.78■■□□□ 1.24
RHOBTB3-213ENST00000512878 ABCA10Q8WWZ4 1543 aa22.75■■□□□ 1.23
RHOBTB3-213ENST00000512878 ABCA5Q8WWZ7 1642 aa22.75■■□□□ 1.23
RHOBTB3-213ENST00000512878 ARHGEF11O15085 1522 aa22.74■■□□□ 1.23
RHOBTB3-213ENST00000512878 WRNQ14191 1432 aaPredicted RBP eCLIP22.72■■□□□ 1.23
RHOBTB3-213ENST00000512878 GRIN2BQ13224 1484 aa22.7■■□□□ 1.22
RHOBTB3-213ENST00000512878 MAGI1Q96QZ7 1491 aaPredicted RBP22.69■■□□□ 1.22
RHOBTB3-213ENST00000512878 GAPVD1Q14C86 1478 aa22.68■■□□□ 1.22
RHOBTB3-213ENST00000512878 SYNJ2O15056 1496 aa22.6■■□□□ 1.21
RHOBTB3-213ENST00000512878 CHMP7Q8WUX9 453 aaPredicted RBP22.6■■□□□ 1.21
RHOBTB3-213ENST00000512878 CLASP1Q7Z460 1538 aa22.59■■□□□ 1.21
RHOBTB3-213ENST00000512878 ARAP1Q96P48 1450 aa22.56■■□□□ 1.2
RHOBTB3-213ENST00000512878 CYB5RLQ6IPT4 315 aa22.55■■□□□ 1.2
RHOBTB3-213ENST00000512878 ADAMTS12P58397 1594 aa22.52■■□□□ 1.2
RHOBTB3-213ENST00000512878 ERICH3Q5RHP9 1530 aa22.47■■□□□ 1.19
RHOBTB3-213ENST00000512878 GRIN2AQ12879 1464 aa22.44■■□□□ 1.18
RHOBTB3-213ENST00000512878 CEP170Q5SW79 1584 aa22.4■■□□□ 1.18
RHOBTB3-213ENST00000512878 FHAD1B1AJZ9 1412 aa22.39■■□□□ 1.17
RHOBTB3-213ENST00000512878 NUP160Q12769 1436 aa22.36■■□□□ 1.17
RHOBTB3-213ENST00000512878 ERCC6L2Q5T890 1561 aa22.34■■□□□ 1.17
RHOBTB3-213ENST00000512878 SHROOM2Q13796 1616 aa22.3■■□□□ 1.16
RHOBTB3-213ENST00000512878 CUL7Q14999 1698 aa22.25■■□□□ 1.15
RHOBTB3-213ENST00000512878 KIF27Q86VH2 1401 aa22.24■■□□□ 1.15
RHOBTB3-213ENST00000512878 IGF1RP08069 1367 aa22.22■■□□□ 1.15
RHOBTB3-213ENST00000512878 RUSC2Q8N2Y8 1516 aa22.21■■□□□ 1.15
RHOBTB3-213ENST00000512878 TRHP20396 242 aaPredicted RBP22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms