RNA–Protein interactions for RNA: ENST00000512572.1

CTD-3080P12.3-202, humanhuman

TSL 3

Gene CTD-3080P12.3, Length 1,023 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTD-3080P12.3-202ENST00000512572 NISCHQ9Y2I1 1504 aa28.99■■■□□ 2.23
CTD-3080P12.3-202ENST00000512572 CCDC180Q9P1Z9 1646 aa25.83■■□□□ 1.73
CTD-3080P12.3-202ENST00000512572 ABCC9O60706 1549 aa25■■□□□ 1.59
CTD-3080P12.3-202ENST00000512572 NACADO15069 1562 aa24.2■■□□□ 1.47
CTD-3080P12.3-202ENST00000512572 RB1CC1Q8TDY2 1594 aa24.19■■□□□ 1.46
CTD-3080P12.3-202ENST00000512572 ZCCHC6Q5VYS8 1495 aaKnown RBP24.19■■□□□ 1.46
CTD-3080P12.3-202ENST00000512572 MYO15BQ96JP2 1530 aa24.15■■□□□ 1.46
CTD-3080P12.3-202ENST00000512572 DCAF1Q9Y4B6 1507 aa24.07■■□□□ 1.44
CTD-3080P12.3-202ENST00000512572 DCAF8L2P0C7V8 631 aa23.97■■□□□ 1.43
CTD-3080P12.3-202ENST00000512572 UNC13AQ9UPW8 1703 aa23.73■■□□□ 1.39
CTD-3080P12.3-202ENST00000512572 BICRAQ9NZM4 1560 aa23.48■■□□□ 1.35
CTD-3080P12.3-202ENST00000512572 SCRIBQ14160 1630 aa23.44■■□□□ 1.34
CTD-3080P12.3-202ENST00000512572 PABPN1Q86U42 306 aaKnown RBP eCLIP23.31■■□□□ 1.32
CTD-3080P12.3-202ENST00000512572 SHROOM4Q9ULL8 1493 aa23.28■■□□□ 1.32
CTD-3080P12.3-202ENST00000512572 DNAJC5BQ9UF47 199 aa23.22■■□□□ 1.31
CTD-3080P12.3-202ENST00000512572 EIF4G1Q04637 1599 aaKnown RBP22.82■■□□□ 1.24
CTD-3080P12.3-202ENST00000512572 CC2D2AQ9P2K1 1620 aa22.7■■□□□ 1.22
CTD-3080P12.3-202ENST00000512572 CECR2Q9BXF3 1484 aa22.54■■□□□ 1.2
CTD-3080P12.3-202ENST00000512572 SMARCA4P51532 1647 aa22.49■■□□□ 1.19
CTD-3080P12.3-202ENST00000512572 BAZ1AQ9NRL2 1556 aaPredicted RBP22.48■■□□□ 1.19
CTD-3080P12.3-202ENST00000512572 PEG3Q9GZU2 1588 aa22.33■■□□□ 1.16
CTD-3080P12.3-202ENST00000512572 MROH2BQ7Z745 1585 aa22.32■■□□□ 1.16
CTD-3080P12.3-202ENST00000512572 SMARCA2P51531 1590 aa22.31■■□□□ 1.16
CTD-3080P12.3-202ENST00000512572 NCAPD3P42695 1498 aa22.31■■□□□ 1.16
CTD-3080P12.3-202ENST00000512572 ATAD2BQ9ULI0 1458 aa22.31■■□□□ 1.16
CTD-3080P12.3-202ENST00000512572 HMGXB3Q12766 1538 aa22.24■■□□□ 1.15
CTD-3080P12.3-202ENST00000512572 WIZO95785 1651 aa22.11■■□□□ 1.13
CTD-3080P12.3-202ENST00000512572 BAZ1BQ9UIG0 1483 aaKnown RBP22.11■■□□□ 1.13
CTD-3080P12.3-202ENST00000512572 RSF1Q96T23 1441 aaPredicted RBP22.09■■□□□ 1.13
CTD-3080P12.3-202ENST00000512572 TOP2AP11388 1531 aaKnown RBP21.89■■□□□ 1.09
CTD-3080P12.3-202ENST00000512572 LAMC3Q9Y6N6 1575 aa21.73■■□□□ 1.07
CTD-3080P12.3-202ENST00000512572 NESP48681 1621 aa21.69■■□□□ 1.06
CTD-3080P12.3-202ENST00000512572 CADPSQ9ULU8 1353 aa21.62■■□□□ 1.05
CTD-3080P12.3-202ENST00000512572 CCDC88BA6NC98 1476 aa21.59■■□□□ 1.05
CTD-3080P12.3-202ENST00000512572 CFTRP13569 1480 aa21.55■■□□□ 1.04
CTD-3080P12.3-202ENST00000512572 ERCC6Q03468 1493 aa21.53■■□□□ 1.04
CTD-3080P12.3-202ENST00000512572 PDS5BQ9NTI5 1447 aa21.52■■□□□ 1.04
CTD-3080P12.3-202ENST00000512572 PRDM2Q13029 1718 aa21.52■■□□□ 1.03
CTD-3080P12.3-202ENST00000512572 KIF21AQ7Z4S6 1674 aa21.51■■□□□ 1.03
CTD-3080P12.3-202ENST00000512572 SUPT5HO00267 1087 aaKnown RBP21.46■■□□□ 1.03
CTD-3080P12.3-202ENST00000512572 THOC2Q8NI27 1593 aaKnown RBP21.42■■□□□ 1.02
CTD-3080P12.3-202ENST00000512572 FANCD2Q9BXW9 1451 aa21.37■■□□□ 1.01
CTD-3080P12.3-202ENST00000512572 CUX2O14529 1486 aa21.36■■□□□ 1.01
CTD-3080P12.3-202ENST00000512572 CEP164Q9UPV0 1460 aa21.34■■□□□ 1.01
CTD-3080P12.3-202ENST00000512572 DNAJC5Q9H3Z4 198 aa21.32■■□□□ 1
CTD-3080P12.3-202ENST00000512572 MRC2Q9UBG0 1479 aa21.3■■□□□ 1
CTD-3080P12.3-202ENST00000512572 WDR62O43379 1518 aa21.27■■□□□ 1
CTD-3080P12.3-202ENST00000512572 URB2Q14146 1524 aaKnown RBP21.17■□□□□ 0.98
CTD-3080P12.3-202ENST00000512572 ABCC8Q09428 1581 aa21.1■□□□□ 0.97
CTD-3080P12.3-202ENST00000512572 DNMBPQ6XZF7 1577 aa21.07■□□□□ 0.96
CTD-3080P12.3-202ENST00000512572 TOPBP1Q92547 1522 aa21.07■□□□□ 0.96
CTD-3080P12.3-202ENST00000512572 CUX1P39880 1505 aa20.94■□□□□ 0.94
CTD-3080P12.3-202ENST00000512572 IFT140Q96RY7 1462 aa20.91■□□□□ 0.94
CTD-3080P12.3-202ENST00000512572 POLA1P09884 1462 aaPredicted RBP20.88■□□□□ 0.93
CTD-3080P12.3-202ENST00000512572 TARBP1Q13395 1621 aaKnown RBP20.87■□□□□ 0.93
CTD-3080P12.3-202ENST00000512572 BIVM-ERCC5R4GMW8 1640 aa20.86■□□□□ 0.93
CTD-3080P12.3-202ENST00000512572 FGD5Q6ZNL6 1462 aa20.84■□□□□ 0.93
CTD-3080P12.3-202ENST00000512572 TOP2BQ02880 1626 aa20.82■□□□□ 0.92
CTD-3080P12.3-202ENST00000512572 WRNQ14191 1432 aaPredicted RBP eCLIP20.81■□□□□ 0.92
CTD-3080P12.3-202ENST00000512572 SYNJ1O43426 1573 aa20.8■□□□□ 0.92
CTD-3080P12.3-202ENST00000512572 ZNF608Q9ULD9 1512 aaPredicted RBP20.78■□□□□ 0.92
CTD-3080P12.3-202ENST00000512572 SOGA1O94964 1423 aa20.77■□□□□ 0.91
CTD-3080P12.3-202ENST00000512572 WDR97A6NE52 1622 aa20.76■□□□□ 0.91
CTD-3080P12.3-202ENST00000512572 RAD54L2Q9Y4B4 1467 aa20.75■□□□□ 0.91
CTD-3080P12.3-202ENST00000512572 EIF4G3O43432 1585 aaKnown RBP20.75■□□□□ 0.91
CTD-3080P12.3-202ENST00000512572 ABCA10Q8WWZ4 1543 aa20.68■□□□□ 0.9
CTD-3080P12.3-202ENST00000512572 AQRO60306 1485 aaKnown RBP eCLIP20.64■□□□□ 0.89
CTD-3080P12.3-202ENST00000512572 ABCA5Q8WWZ7 1642 aa20.62■□□□□ 0.89
CTD-3080P12.3-202ENST00000512572 TDRD9Q8NDG6 1382 aaKnown RBP20.6■□□□□ 0.89
CTD-3080P12.3-202ENST00000512572 PBRM1Q86U86 1689 aa20.58■□□□□ 0.89
CTD-3080P12.3-202ENST00000512572 GAPVD1Q14C86 1478 aa20.55■□□□□ 0.88
CTD-3080P12.3-202ENST00000512572 GRIN2BQ13224 1484 aa20.54■□□□□ 0.88
CTD-3080P12.3-202ENST00000512572 MAGI1Q96QZ7 1491 aaPredicted RBP20.5■□□□□ 0.87
CTD-3080P12.3-202ENST00000512572 CHD1O14646 1710 aa20.5■□□□□ 0.87
CTD-3080P12.3-202ENST00000512572 SNAPC4Q5SXM2 1469 aa20.49■□□□□ 0.87
CTD-3080P12.3-202ENST00000512572 TRIM41Q8WV44 630 aa20.47■□□□□ 0.87
CTD-3080P12.3-202ENST00000512572 ERICH3Q5RHP9 1530 aa20.44■□□□□ 0.86
CTD-3080P12.3-202ENST00000512572 OSCARQ8IYS5 282 aa20.41■□□□□ 0.86
CTD-3080P12.3-202ENST00000512572 SYNJ2O15056 1496 aa20.41■□□□□ 0.86
CTD-3080P12.3-202ENST00000512572 ADAMTS12P58397 1594 aa20.39■□□□□ 0.85
CTD-3080P12.3-202ENST00000512572 KIF27Q86VH2 1401 aa20.37■□□□□ 0.85
CTD-3080P12.3-202ENST00000512572 FHAD1B1AJZ9 1412 aa20.33■□□□□ 0.84
CTD-3080P12.3-202ENST00000512572 CUL7Q14999 1698 aa20.3■□□□□ 0.84
CTD-3080P12.3-202ENST00000512572 CHMP7Q8WUX9 453 aaPredicted RBP20.3■□□□□ 0.84
CTD-3080P12.3-202ENST00000512572 FBLN2P98095 1184 aa20.29■□□□□ 0.84
CTD-3080P12.3-202ENST00000512572 GRIN2AQ12879 1464 aa20.29■□□□□ 0.84
CTD-3080P12.3-202ENST00000512572 IGF1RP08069 1367 aa20.28■□□□□ 0.84
CTD-3080P12.3-202ENST00000512572 CLASP1Q7Z460 1538 aa20.27■□□□□ 0.83
CTD-3080P12.3-202ENST00000512572 NUP160Q12769 1436 aa20.21■□□□□ 0.83
CTD-3080P12.3-202ENST00000512572 RUSC2Q8N2Y8 1516 aa20.21■□□□□ 0.83
CTD-3080P12.3-202ENST00000512572 CEP170Q5SW79 1584 aa20.2■□□□□ 0.82
CTD-3080P12.3-202ENST00000512572 CHIC1Q5VXU3 224 aa20.16■□□□□ 0.82
CTD-3080P12.3-202ENST00000512572 RIMBP3CA6NJZ7 1639 aa20.15■□□□□ 0.82
CTD-3080P12.3-202ENST00000512572 RIMBP3BA6NNM3 1639 aa20.15■□□□□ 0.82
CTD-3080P12.3-202ENST00000512572 RIMBP3Q9UFD9 1639 aa20.15■□□□□ 0.82
CTD-3080P12.3-202ENST00000512572 CARMIL1Q5VZK9 1371 aa20.14■□□□□ 0.81
CTD-3080P12.3-202ENST00000512572 ARHGEF11O15085 1522 aa20.13■□□□□ 0.81
CTD-3080P12.3-202ENST00000512572 SHROOM2Q13796 1616 aa20.1■□□□□ 0.81
CTD-3080P12.3-202ENST00000512572 EEA1Q15075 1411 aa20.09■□□□□ 0.81
CTD-3080P12.3-202ENST00000512572 RAPGEF2Q9Y4G8 1499 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms