RNA–Protein interactions for RNA: ENST00000512339.5

FAM13A-219, Transcript of family with sequence similarity 13 member A, humanhuman

TSL 5

Gene FAM13A, Length 1,511 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM13A-219ENST00000512339 NISCHQ9Y2I1 1504 aa25.96■■□□□ 1.75
FAM13A-219ENST00000512339 AEBP2Q6ZN18 517 aaPredicted RBP23.99■■□□□ 1.43
FAM13A-219ENST00000512339 ABCC9O60706 1549 aa23.54■■□□□ 1.36
FAM13A-219ENST00000512339 CCDC180Q9P1Z9 1646 aa23.28■■□□□ 1.32
FAM13A-219ENST00000512339 CHIC1Q5VXU3 224 aa22.71■■□□□ 1.23
FAM13A-219ENST00000512339 DNAJC5BQ9UF47 199 aa22.29■■□□□ 1.16
FAM13A-219ENST00000512339 RB1CC1Q8TDY2 1594 aa22.25■■□□□ 1.15
FAM13A-219ENST00000512339 DCAF8L2P0C7V8 631 aa22.06■■□□□ 1.12
FAM13A-219ENST00000512339 NACADO15069 1562 aa22.05■■□□□ 1.12
FAM13A-219ENST00000512339 PABPN1Q86U42 306 aaKnown RBP eCLIP21.95■■□□□ 1.1
FAM13A-219ENST00000512339 UNC13AQ9UPW8 1703 aa21.84■■□□□ 1.09
FAM13A-219ENST00000512339 BICRAQ9NZM4 1560 aa21.69■■□□□ 1.06
FAM13A-219ENST00000512339 MYO15BQ96JP2 1530 aa21.66■■□□□ 1.06
FAM13A-219ENST00000512339 ZCCHC6Q5VYS8 1495 aaKnown RBP21.47■■□□□ 1.03
FAM13A-219ENST00000512339 DCAF1Q9Y4B6 1507 aa21.36■■□□□ 1.01
FAM13A-219ENST00000512339 SCRIBQ14160 1630 aa21.31■■□□□ 1
FAM13A-219ENST00000512339 CC2D2AQ9P2K1 1620 aa21.23■□□□□ 0.99
FAM13A-219ENST00000512339 SHROOM4Q9ULL8 1493 aa21.2■□□□□ 0.98
FAM13A-219ENST00000512339 CECR2Q9BXF3 1484 aa21.18■□□□□ 0.98
FAM13A-219ENST00000512339 EIF4G1Q04637 1599 aaKnown RBP21.13■□□□□ 0.97
FAM13A-219ENST00000512339 DNAJC5Q9H3Z4 198 aa20.45■□□□□ 0.86
FAM13A-219ENST00000512339 NCAPD3P42695 1498 aa20.39■□□□□ 0.85
FAM13A-219ENST00000512339 ATAD2BQ9ULI0 1458 aa20.34■□□□□ 0.85
FAM13A-219ENST00000512339 SMARCA4P51532 1647 aa20.28■□□□□ 0.84
FAM13A-219ENST00000512339 ERCC6Q03468 1493 aa20.27■□□□□ 0.84
FAM13A-219ENST00000512339 SENP3Q9H4L4 574 aaPredicted RBP20.26■□□□□ 0.83
FAM13A-219ENST00000512339 CUX2O14529 1486 aa20.23■□□□□ 0.83
FAM13A-219ENST00000512339 NESP48681 1621 aa20.22■□□□□ 0.83
FAM13A-219ENST00000512339 SMARCA2P51531 1590 aa20.22■□□□□ 0.83
FAM13A-219ENST00000512339 HMGXB3Q12766 1538 aa20.19■□□□□ 0.82
FAM13A-219ENST00000512339 PHF23Q9BUL5 403 aaPredicted RBP20.12■□□□□ 0.81
FAM13A-219ENST00000512339 BAZ1AQ9NRL2 1556 aaPredicted RBP20.11■□□□□ 0.81
FAM13A-219ENST00000512339 BAZ1BQ9UIG0 1483 aaKnown RBP20.11■□□□□ 0.81
FAM13A-219ENST00000512339 MROH2BQ7Z745 1585 aa20.05■□□□□ 0.8
FAM13A-219ENST00000512339 PEG3Q9GZU2 1588 aa20.03■□□□□ 0.8
FAM13A-219ENST00000512339 THOC2Q8NI27 1593 aaKnown RBP19.97■□□□□ 0.79
FAM13A-219ENST00000512339 LAMC3Q9Y6N6 1575 aa19.93■□□□□ 0.78
FAM13A-219ENST00000512339 KIF21AQ7Z4S6 1674 aa19.91■□□□□ 0.78
FAM13A-219ENST00000512339 WIZO95785 1651 aa19.82■□□□□ 0.76
FAM13A-219ENST00000512339 PDS5BQ9NTI5 1447 aa19.82■□□□□ 0.76
FAM13A-219ENST00000512339 CADPSQ9ULU8 1353 aa19.78■□□□□ 0.76
FAM13A-219ENST00000512339 MRC2Q9UBG0 1479 aa19.68■□□□□ 0.74
FAM13A-219ENST00000512339 WDR62O43379 1518 aa19.64■□□□□ 0.73
FAM13A-219ENST00000512339 RSF1Q96T23 1441 aaPredicted RBP19.58■□□□□ 0.72
FAM13A-219ENST00000512339 CEP164Q9UPV0 1460 aa19.57■□□□□ 0.72
FAM13A-219ENST00000512339 FANCD2Q9BXW9 1451 aa19.56■□□□□ 0.72
FAM13A-219ENST00000512339 TRIM41Q8WV44 630 aa19.56■□□□□ 0.72
FAM13A-219ENST00000512339 CFTRP13569 1480 aa19.52■□□□□ 0.72
FAM13A-219ENST00000512339 TOP2AP11388 1531 aaKnown RBP19.48■□□□□ 0.71
FAM13A-219ENST00000512339 POTEDQ86YR6 584 aa19.46■□□□□ 0.71
FAM13A-219ENST00000512339 URB2Q14146 1524 aaKnown RBP19.45■□□□□ 0.7
FAM13A-219ENST00000512339 OSCARQ8IYS5 282 aa19.34■□□□□ 0.69
FAM13A-219ENST00000512339 CCDC88BA6NC98 1476 aa19.32■□□□□ 0.68
FAM13A-219ENST00000512339 PRDM2Q13029 1718 aa19.29■□□□□ 0.68
FAM13A-219ENST00000512339 ZNF608Q9ULD9 1512 aaPredicted RBP19.26■□□□□ 0.67
FAM13A-219ENST00000512339 TOPBP1Q92547 1522 aa19.19■□□□□ 0.66
FAM13A-219ENST00000512339 IFT140Q96RY7 1462 aa19.17■□□□□ 0.66
FAM13A-219ENST00000512339 RIMBP3CA6NJZ7 1639 aa19.14■□□□□ 0.65
FAM13A-219ENST00000512339 RIMBP3BA6NNM3 1639 aa19.14■□□□□ 0.65
FAM13A-219ENST00000512339 RIMBP3Q9UFD9 1639 aa19.14■□□□□ 0.65
FAM13A-219ENST00000512339 EIF4G3O43432 1585 aaKnown RBP19.09■□□□□ 0.65
FAM13A-219ENST00000512339 DNMBPQ6XZF7 1577 aa19.07■□□□□ 0.64
FAM13A-219ENST00000512339 AQRO60306 1485 aaKnown RBP eCLIP19.06■□□□□ 0.64
FAM13A-219ENST00000512339 ARHGEF11O15085 1522 aa19.04■□□□□ 0.64
FAM13A-219ENST00000512339 ABCC8Q09428 1581 aa19.04■□□□□ 0.64
FAM13A-219ENST00000512339 TARBP1Q13395 1621 aaKnown RBP19.03■□□□□ 0.64
FAM13A-219ENST00000512339 FOXD1Q16676 465 aa19.01■□□□□ 0.63
FAM13A-219ENST00000512339 CHD1O14646 1710 aa19■□□□□ 0.63
FAM13A-219ENST00000512339 POLA1P09884 1462 aaPredicted RBP18.99■□□□□ 0.63
FAM13A-219ENST00000512339 RAD54L2Q9Y4B4 1467 aa18.97■□□□□ 0.63
FAM13A-219ENST00000512339 CYB5RLQ6IPT4 315 aa18.96■□□□□ 0.63
FAM13A-219ENST00000512339 FBLN2P98095 1184 aa18.95■□□□□ 0.62
FAM13A-219ENST00000512339 TDRD9Q8NDG6 1382 aaKnown RBP18.92■□□□□ 0.62
FAM13A-219ENST00000512339 SOGA1O94964 1423 aa18.9■□□□□ 0.62
FAM13A-219ENST00000512339 ARAP1Q96P48 1450 aa18.87■□□□□ 0.61
FAM13A-219ENST00000512339 FGD5Q6ZNL6 1462 aa18.86■□□□□ 0.61
FAM13A-219ENST00000512339 CUX1P39880 1505 aa18.84■□□□□ 0.61
FAM13A-219ENST00000512339 SNAPC4Q5SXM2 1469 aa18.83■□□□□ 0.6
FAM13A-219ENST00000512339 TRHP20396 242 aaPredicted RBP18.77■□□□□ 0.6
FAM13A-219ENST00000512339 CHMP7Q8WUX9 453 aaPredicted RBP18.74■□□□□ 0.59
FAM13A-219ENST00000512339 CLASP1Q7Z460 1538 aa18.74■□□□□ 0.59
FAM13A-219ENST00000512339 GRIN2BQ13224 1484 aa18.71■□□□□ 0.59
FAM13A-219ENST00000512339 MAGI1Q96QZ7 1491 aaPredicted RBP18.7■□□□□ 0.58
FAM13A-219ENST00000512339 WDR97A6NE52 1622 aa18.7■□□□□ 0.58
FAM13A-219ENST00000512339 SUPT5HO00267 1087 aaKnown RBP18.68■□□□□ 0.58
FAM13A-219ENST00000512339 SYNJ1O43426 1573 aa18.67■□□□□ 0.58
FAM13A-219ENST00000512339 SYNJ2O15056 1496 aa18.67■□□□□ 0.58
FAM13A-219ENST00000512339 PBRM1Q86U86 1689 aa18.66■□□□□ 0.58
FAM13A-219ENST00000512339 GAPVD1Q14C86 1478 aa18.65■□□□□ 0.58
FAM13A-219ENST00000512339 ABCA10Q8WWZ4 1543 aa18.59■□□□□ 0.57
FAM13A-219ENST00000512339 ABCA5Q8WWZ7 1642 aa18.59■□□□□ 0.57
FAM13A-219ENST00000512339 ERCC6L2Q5T890 1561 aa18.53■□□□□ 0.56
FAM13A-219ENST00000512339 GRIN2AQ12879 1464 aa18.49■□□□□ 0.55
FAM13A-219ENST00000512339 WRNQ14191 1432 aaPredicted RBP eCLIP18.48■□□□□ 0.55
FAM13A-219ENST00000512339 ADAMTS12P58397 1594 aa18.46■□□□□ 0.55
FAM13A-219ENST00000512339 CEP170Q5SW79 1584 aa18.46■□□□□ 0.55
FAM13A-219ENST00000512339 TOP2BQ02880 1626 aa18.45■□□□□ 0.54
FAM13A-219ENST00000512339 BIVM-ERCC5R4GMW8 1640 aa18.45■□□□□ 0.54
FAM13A-219ENST00000512339 NUP160Q12769 1436 aa18.43■□□□□ 0.54
FAM13A-219ENST00000512339 FHAD1B1AJZ9 1412 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms