RNA–Protein interactions for RNA: ENST00000512204.5

PDK2-213, Transcript of pyruvate dehydrogenase kinase 2, humanhuman

TSL 2

Gene PDK2, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK2-213ENST00000512204 NISCHQ9Y2I1 1504 aa25.53■■□□□ 1.68
PDK2-213ENST00000512204 CCDC180Q9P1Z9 1646 aa22.86■■□□□ 1.25
PDK2-213ENST00000512204 ABCC9O60706 1549 aa22.72■■□□□ 1.23
PDK2-213ENST00000512204 RB1CC1Q8TDY2 1594 aa21.66■■□□□ 1.06
PDK2-213ENST00000512204 NACADO15069 1562 aa21.55■■□□□ 1.04
PDK2-213ENST00000512204 DCAF8L2P0C7V8 631 aa21.41■■□□□ 1.02
PDK2-213ENST00000512204 ZCCHC6Q5VYS8 1495 aaKnown RBP21.35■■□□□ 1.01
PDK2-213ENST00000512204 UNC13AQ9UPW8 1703 aa21.31■■□□□ 1
PDK2-213ENST00000512204 MYO15BQ96JP2 1530 aa21.28■■□□□ 1
PDK2-213ENST00000512204 DNAJC5BQ9UF47 199 aa21.25■□□□□ 0.99
PDK2-213ENST00000512204 DCAF1Q9Y4B6 1507 aa21.2■□□□□ 0.98
PDK2-213ENST00000512204 PABPN1Q86U42 306 aaKnown RBP eCLIP21.16■□□□□ 0.98
PDK2-213ENST00000512204 BICRAQ9NZM4 1560 aa21.1■□□□□ 0.97
PDK2-213ENST00000512204 SCRIBQ14160 1630 aa20.83■□□□□ 0.93
PDK2-213ENST00000512204 SHROOM4Q9ULL8 1493 aa20.73■□□□□ 0.91
PDK2-213ENST00000512204 CC2D2AQ9P2K1 1620 aa20.56■□□□□ 0.88
PDK2-213ENST00000512204 EIF4G1Q04637 1599 aaKnown RBP20.53■□□□□ 0.88
PDK2-213ENST00000512204 CECR2Q9BXF3 1484 aa20.44■□□□□ 0.86
PDK2-213ENST00000512204 DNAJC5Q9H3Z4 198 aa20■□□□□ 0.79
PDK2-213ENST00000512204 SMARCA4P51532 1647 aa19.89■□□□□ 0.77
PDK2-213ENST00000512204 NCAPD3P42695 1498 aa19.88■□□□□ 0.77
PDK2-213ENST00000512204 ATAD2BQ9ULI0 1458 aa19.86■□□□□ 0.77
PDK2-213ENST00000512204 BAZ1AQ9NRL2 1556 aaPredicted RBP19.8■□□□□ 0.76
PDK2-213ENST00000512204 SMARCA2P51531 1590 aa19.79■□□□□ 0.76
PDK2-213ENST00000512204 HMGXB3Q12766 1538 aa19.76■□□□□ 0.75
PDK2-213ENST00000512204 PEG3Q9GZU2 1588 aa19.68■□□□□ 0.74
PDK2-213ENST00000512204 MROH2BQ7Z745 1585 aa19.67■□□□□ 0.74
PDK2-213ENST00000512204 BAZ1BQ9UIG0 1483 aaKnown RBP19.65■□□□□ 0.74
PDK2-213ENST00000512204 NESP48681 1621 aa19.58■□□□□ 0.73
PDK2-213ENST00000512204 ERCC6Q03468 1493 aa19.57■□□□□ 0.72
PDK2-213ENST00000512204 CUX2O14529 1486 aa19.52■□□□□ 0.72
PDK2-213ENST00000512204 RSF1Q96T23 1441 aaPredicted RBP19.51■□□□□ 0.71
PDK2-213ENST00000512204 WIZO95785 1651 aa19.46■□□□□ 0.71
PDK2-213ENST00000512204 LAMC3Q9Y6N6 1575 aa19.43■□□□□ 0.7
PDK2-213ENST00000512204 KIF21AQ7Z4S6 1674 aa19.37■□□□□ 0.69
PDK2-213ENST00000512204 THOC2Q8NI27 1593 aaKnown RBP19.37■□□□□ 0.69
PDK2-213ENST00000512204 TOP2AP11388 1531 aaKnown RBP19.31■□□□□ 0.68
PDK2-213ENST00000512204 CADPSQ9ULU8 1353 aa19.27■□□□□ 0.68
PDK2-213ENST00000512204 PDS5BQ9NTI5 1447 aa19.26■□□□□ 0.67
PDK2-213ENST00000512204 MRC2Q9UBG0 1479 aa19.13■□□□□ 0.65
PDK2-213ENST00000512204 WDR62O43379 1518 aa19.1■□□□□ 0.65
PDK2-213ENST00000512204 CFTRP13569 1480 aa19.09■□□□□ 0.65
PDK2-213ENST00000512204 SUPT5HO00267 1087 aaKnown RBP19.09■□□□□ 0.65
PDK2-213ENST00000512204 FANCD2Q9BXW9 1451 aa19.07■□□□□ 0.64
PDK2-213ENST00000512204 CEP164Q9UPV0 1460 aa19.07■□□□□ 0.64
PDK2-213ENST00000512204 CCDC88BA6NC98 1476 aa19.03■□□□□ 0.64
PDK2-213ENST00000512204 PRDM2Q13029 1718 aa19■□□□□ 0.63
PDK2-213ENST00000512204 URB2Q14146 1524 aaKnown RBP18.94■□□□□ 0.62
PDK2-213ENST00000512204 TOPBP1Q92547 1522 aa18.74■□□□□ 0.59
PDK2-213ENST00000512204 ZNF608Q9ULD9 1512 aaPredicted RBP18.69■□□□□ 0.58
PDK2-213ENST00000512204 IFT140Q96RY7 1462 aa18.68■□□□□ 0.58
PDK2-213ENST00000512204 DNMBPQ6XZF7 1577 aa18.68■□□□□ 0.58
PDK2-213ENST00000512204 ABCC8Q09428 1581 aa18.66■□□□□ 0.58
PDK2-213ENST00000512204 OSCARQ8IYS5 282 aa18.61■□□□□ 0.57
PDK2-213ENST00000512204 EIF4G3O43432 1585 aaKnown RBP18.59■□□□□ 0.57
PDK2-213ENST00000512204 TARBP1Q13395 1621 aaKnown RBP18.59■□□□□ 0.57
PDK2-213ENST00000512204 TRIM41Q8WV44 630 aa18.57■□□□□ 0.56
PDK2-213ENST00000512204 POLA1P09884 1462 aaPredicted RBP18.55■□□□□ 0.56
PDK2-213ENST00000512204 AQRO60306 1485 aaKnown RBP eCLIP18.51■□□□□ 0.55
PDK2-213ENST00000512204 RAD54L2Q9Y4B4 1467 aa18.49■□□□□ 0.55
PDK2-213ENST00000512204 CHD1O14646 1710 aa18.48■□□□□ 0.55
PDK2-213ENST00000512204 CUX1P39880 1505 aa18.47■□□□□ 0.55
PDK2-213ENST00000512204 FGD5Q6ZNL6 1462 aa18.45■□□□□ 0.54
PDK2-213ENST00000512204 RIMBP3CA6NJZ7 1639 aa18.45■□□□□ 0.54
PDK2-213ENST00000512204 RIMBP3BA6NNM3 1639 aa18.45■□□□□ 0.54
PDK2-213ENST00000512204 RIMBP3Q9UFD9 1639 aa18.45■□□□□ 0.54
PDK2-213ENST00000512204 SOGA1O94964 1423 aa18.44■□□□□ 0.54
PDK2-213ENST00000512204 WRNQ14191 1432 aaPredicted RBP eCLIP18.41■□□□□ 0.54
PDK2-213ENST00000512204 TDRD9Q8NDG6 1382 aaKnown RBP18.41■□□□□ 0.54
PDK2-213ENST00000512204 BIVM-ERCC5R4GMW8 1640 aa18.38■□□□□ 0.53
PDK2-213ENST00000512204 WDR97A6NE52 1622 aa18.38■□□□□ 0.53
PDK2-213ENST00000512204 TOP2BQ02880 1626 aa18.38■□□□□ 0.53
PDK2-213ENST00000512204 ARHGEF11O15085 1522 aa18.37■□□□□ 0.53
PDK2-213ENST00000512204 SYNJ1O43426 1573 aa18.34■□□□□ 0.53
PDK2-213ENST00000512204 SNAPC4Q5SXM2 1469 aa18.33■□□□□ 0.52
PDK2-213ENST00000512204 FBLN2P98095 1184 aa18.32■□□□□ 0.52
PDK2-213ENST00000512204 PBRM1Q86U86 1689 aa18.28■□□□□ 0.52
PDK2-213ENST00000512204 GRIN2BQ13224 1484 aa18.26■□□□□ 0.51
PDK2-213ENST00000512204 MAGI1Q96QZ7 1491 aaPredicted RBP18.26■□□□□ 0.51
PDK2-213ENST00000512204 ABCA10Q8WWZ4 1543 aa18.24■□□□□ 0.51
PDK2-213ENST00000512204 ABCA5Q8WWZ7 1642 aa18.24■□□□□ 0.51
PDK2-213ENST00000512204 CLASP1Q7Z460 1538 aa18.23■□□□□ 0.51
PDK2-213ENST00000512204 GAPVD1Q14C86 1478 aa18.22■□□□□ 0.51
PDK2-213ENST00000512204 ARAP1Q96P48 1450 aa18.2■□□□□ 0.5
PDK2-213ENST00000512204 SYNJ2O15056 1496 aa18.2■□□□□ 0.5
PDK2-213ENST00000512204 CYB5RLQ6IPT4 315 aa18.19■□□□□ 0.5
PDK2-213ENST00000512204 CHMP7Q8WUX9 453 aaPredicted RBP18.19■□□□□ 0.5
PDK2-213ENST00000512204 ADAMTS12P58397 1594 aa18.08■□□□□ 0.49
PDK2-213ENST00000512204 GRIN2AQ12879 1464 aa18.05■□□□□ 0.48
PDK2-213ENST00000512204 CEP170Q5SW79 1584 aa18.02■□□□□ 0.48
PDK2-213ENST00000512204 KIF27Q86VH2 1401 aa18.02■□□□□ 0.48
PDK2-213ENST00000512204 ERICH3Q5RHP9 1530 aa18.01■□□□□ 0.47
PDK2-213ENST00000512204 CHIC1Q5VXU3 224 aa18■□□□□ 0.47
PDK2-213ENST00000512204 FHAD1B1AJZ9 1412 aa17.99■□□□□ 0.47
PDK2-213ENST00000512204 NUP160Q12769 1436 aa17.99■□□□□ 0.47
PDK2-213ENST00000512204 ERCC6L2Q5T890 1561 aa17.98■□□□□ 0.47
PDK2-213ENST00000512204 SHROOM2Q13796 1616 aa17.94■□□□□ 0.46
PDK2-213ENST00000512204 TRHP20396 242 aaPredicted RBP17.93■□□□□ 0.46
PDK2-213ENST00000512204 CUL7Q14999 1698 aa17.9■□□□□ 0.46
PDK2-213ENST00000512204 EEA1Q15075 1411 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms